RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 GAPVD1Q14C86 1478 aa20.84■□□□□ 0.93
SNCAIP-204ENST00000395466 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
SNCAIP-204ENST00000395466 CFAP43Q8NDM7 1665 aa20.83■□□□□ 0.93
SNCAIP-204ENST00000395466 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.93
SNCAIP-204ENST00000395466 PCF11O94913 1555 aaKnown RBP20.83■□□□□ 0.93
SNCAIP-204ENST00000395466 LRRC9Q6ZRR7 1453 aa20.79■□□□□ 0.92
SNCAIP-204ENST00000395466 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
SNCAIP-204ENST00000395466 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
SNCAIP-204ENST00000395466 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.91
SNCAIP-204ENST00000395466 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
SNCAIP-204ENST00000395466 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
SNCAIP-204ENST00000395466 MRC2Q9UBG0 1479 aa20.73■□□□□ 0.91
SNCAIP-204ENST00000395466 SAMD9Q5K651 1589 aa20.73■□□□□ 0.91
SNCAIP-204ENST00000395466 PBRM1Q86U86 1689 aa20.73■□□□□ 0.91
SNCAIP-204ENST00000395466 CASKIN1Q8WXD9 1431 aa20.72■□□□□ 0.91
SNCAIP-204ENST00000395466 DHX57Q6P158 1386 aaKnown RBP20.69■□□□□ 0.9
SNCAIP-204ENST00000395466 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
SNCAIP-204ENST00000395466 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
SNCAIP-204ENST00000395466 PHLDB1Q86UU1 1377 aa20.66■□□□□ 0.9
SNCAIP-204ENST00000395466 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
SNCAIP-204ENST00000395466 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
SNCAIP-204ENST00000395466 WDR62O43379 1518 aa20.62■□□□□ 0.89
SNCAIP-204ENST00000395466 LRRIQ1Q96JM4 1722 aa20.62■□□□□ 0.89
SNCAIP-204ENST00000395466 ZNF316A6NFI3 1004 aaPredicted RBP20.6■□□□□ 0.89
SNCAIP-204ENST00000395466 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
SNCAIP-204ENST00000395466 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
SNCAIP-204ENST00000395466 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
SNCAIP-204ENST00000395466 ATP1B4Q9UN42 357 aaPredicted RBP20.56■□□□□ 0.88
SNCAIP-204ENST00000395466 THOC2Q8NI27 1593 aaKnown RBP20.55■□□□□ 0.88
SNCAIP-204ENST00000395466 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.88
SNCAIP-204ENST00000395466 ITGAEP38570 1179 aa20.52■□□□□ 0.88
SNCAIP-204ENST00000395466 IQGAP2Q13576 1575 aa20.52■□□□□ 0.88
SNCAIP-204ENST00000395466 RAB3GAP2Q9H2M9 1393 aa20.51■□□□□ 0.87
SNCAIP-204ENST00000395466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.5■□□□□ 0.87
SNCAIP-204ENST00000395466 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
SNCAIP-204ENST00000395466 FAM50AQ14320 339 aaKnown RBP20.45■□□□□ 0.86
SNCAIP-204ENST00000395466 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
SNCAIP-204ENST00000395466 FGD6Q6ZV73 1430 aa20.44■□□□□ 0.86
SNCAIP-204ENST00000395466 UGGT2Q9NYU1 1516 aa20.44■□□□□ 0.86
SNCAIP-204ENST00000395466 EIF4G3O43432 1585 aaKnown RBP20.43■□□□□ 0.86
SNCAIP-204ENST00000395466 MTUS2Q5JR59 1369 aa20.43■□□□□ 0.86
SNCAIP-204ENST00000395466 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
SNCAIP-204ENST00000395466 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
SNCAIP-204ENST00000395466 NCOA2Q15596 1464 aa20.4■□□□□ 0.86
SNCAIP-204ENST00000395466 MAGI3Q5TCQ9 1506 aa20.4■□□□□ 0.86
SNCAIP-204ENST00000395466 HECW1Q76N89 1606 aa20.4■□□□□ 0.86
SNCAIP-204ENST00000395466 CCDC18Q5T9S5 1454 aa20.4■□□□□ 0.86
SNCAIP-204ENST00000395466 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
SNCAIP-204ENST00000395466 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
SNCAIP-204ENST00000395466 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
SNCAIP-204ENST00000395466 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
SNCAIP-204ENST00000395466 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
SNCAIP-204ENST00000395466 EPRSP07814 1512 aaKnown RBP20.33■□□□□ 0.85
SNCAIP-204ENST00000395466 KIAA0556O60303 1618 aa20.32■□□□□ 0.84
SNCAIP-204ENST00000395466 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
SNCAIP-204ENST00000395466 PTPRKQ15262 1439 aa20.31■□□□□ 0.84
SNCAIP-204ENST00000395466 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
SNCAIP-204ENST00000395466 PTPN23Q9H3S7 1636 aa20.29■□□□□ 0.84
SNCAIP-204ENST00000395466 CDK13Q14004 1512 aaKnown RBP20.28■□□□□ 0.84
SNCAIP-204ENST00000395466 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
SNCAIP-204ENST00000395466 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
SNCAIP-204ENST00000395466 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
SNCAIP-204ENST00000395466 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
SNCAIP-204ENST00000395466 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
SNCAIP-204ENST00000395466 MIER1Q8N108 512 aa20.21■□□□□ 0.83
SNCAIP-204ENST00000395466 RAPGEF6Q8TEU7 1601 aa20.2■□□□□ 0.82
SNCAIP-204ENST00000395466 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
SNCAIP-204ENST00000395466 NAIPQ13075 1403 aa20.19■□□□□ 0.82
SNCAIP-204ENST00000395466 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
SNCAIP-204ENST00000395466 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
SNCAIP-204ENST00000395466 NUP160Q12769 1436 aa20.16■□□□□ 0.82
SNCAIP-204ENST00000395466 MIA2Q96PC5 1412 aa20.16■□□□□ 0.82
SNCAIP-204ENST00000395466 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
SNCAIP-204ENST00000395466 UACAQ9BZF9 1416 aa20.15■□□□□ 0.82
SNCAIP-204ENST00000395466 GCC2Q8IWJ2 1684 aa20.15■□□□□ 0.82
SNCAIP-204ENST00000395466 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
SNCAIP-204ENST00000395466 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
SNCAIP-204ENST00000395466 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
SNCAIP-204ENST00000395466 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
SNCAIP-204ENST00000395466 ARID3CA6NKF2 412 aa20.1■□□□□ 0.81
SNCAIP-204ENST00000395466 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
SNCAIP-204ENST00000395466 KDM6BO15054 1643 aa20.03■□□□□ 0.8
SNCAIP-204ENST00000395466 FBLN2P98095 1184 aa20.03■□□□□ 0.8
SNCAIP-204ENST00000395466 JPH4Q96JJ6 628 aa20.03■□□□□ 0.8
SNCAIP-204ENST00000395466 CARMIL2Q6F5E8 1435 aa20.03■□□□□ 0.8
SNCAIP-204ENST00000395466 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.8
SNCAIP-204ENST00000395466 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.8
SNCAIP-204ENST00000395466 TROQ12816 1431 aaPredicted RBP20.02■□□□□ 0.79
SNCAIP-204ENST00000395466 PPP1R15AO75807 674 aaPredicted RBP20.01■□□□□ 0.79
SNCAIP-204ENST00000395466 RRP7BPQ9NSQ0 103 aa20.01■□□□□ 0.79
SNCAIP-204ENST00000395466 DENND4BO75064 1496 aaPredicted RBP20■□□□□ 0.79
SNCAIP-204ENST00000395466 PRG4Q92954 1404 aaPredicted RBP19.99■□□□□ 0.79
SNCAIP-204ENST00000395466 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
SNCAIP-204ENST00000395466 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
SNCAIP-204ENST00000395466 ABCA8O94911 1581 aa19.99■□□□□ 0.79
SNCAIP-204ENST00000395466 DAPK1P53355 1430 aa19.99■□□□□ 0.79
SNCAIP-204ENST00000395466 ABCC5O15440 1437 aa19.97■□□□□ 0.79
SNCAIP-204ENST00000395466 KIF14Q15058 1648 aa19.97■□□□□ 0.79
SNCAIP-204ENST00000395466 ITSN2Q9NZM3 1697 aa19.96■□□□□ 0.79
SNCAIP-204ENST00000395466 ROCK1Q13464 1354 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms