RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 B4GALNT3Q6L9W6 998 aa20.64■□□□□ 0.9
SPOCK1-202ENST00000394945 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
SPOCK1-202ENST00000394945 EIF4G2P78344 907 aaKnown RBP eCLIP20.63■□□□□ 0.89
SPOCK1-202ENST00000394945 RSF1Q96T23 1441 aaPredicted RBP20.58■□□□□ 0.89
SPOCK1-202ENST00000394945 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
SPOCK1-202ENST00000394945 CLIP1P30622 1438 aa20.55■□□□□ 0.88
SPOCK1-202ENST00000394945 CEP162Q5TB80 1403 aa20.55■□□□□ 0.88
SPOCK1-202ENST00000394945 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
SPOCK1-202ENST00000394945 NACADO15069 1562 aa20.54■□□□□ 0.88
SPOCK1-202ENST00000394945 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.53■□□□□ 0.88
SPOCK1-202ENST00000394945 WDR43Q15061 677 aaKnown RBP eCLIP20.52■□□□□ 0.88
SPOCK1-202ENST00000394945 CHIC2Q9UKJ5 165 aa20.51■□□□□ 0.87
SPOCK1-202ENST00000394945 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
SPOCK1-202ENST00000394945 SLC24A1O60721 1099 aa20.46■□□□□ 0.87
SPOCK1-202ENST00000394945 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
SPOCK1-202ENST00000394945 CCER2I3L3R5 266 aa20.41■□□□□ 0.86
SPOCK1-202ENST00000394945 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.85
SPOCK1-202ENST00000394945 RGS3P49796 1198 aa20.37■□□□□ 0.85
SPOCK1-202ENST00000394945 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
SPOCK1-202ENST00000394945 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
SPOCK1-202ENST00000394945 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
SPOCK1-202ENST00000394945 DNTTIP2Q5QJE6 756 aaKnown RBP20.35■□□□□ 0.85
SPOCK1-202ENST00000394945 PTMAP06454 111 aaKnown RBP20.35■□□□□ 0.85
SPOCK1-202ENST00000394945 TNIKQ9UKE5 1360 aa20.32■□□□□ 0.84
SPOCK1-202ENST00000394945 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
SPOCK1-202ENST00000394945 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
SPOCK1-202ENST00000394945 EEA1Q15075 1411 aa20.27■□□□□ 0.84
SPOCK1-202ENST00000394945 IPO9Q96P70 1041 aaKnown RBP20.27■□□□□ 0.84
SPOCK1-202ENST00000394945 RRP7BPQ9NSQ0 103 aa20.27■□□□□ 0.83
SPOCK1-202ENST00000394945 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
SPOCK1-202ENST00000394945 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
SPOCK1-202ENST00000394945 PNNQ9H307 717 aaKnown RBP20.25■□□□□ 0.83
SPOCK1-202ENST00000394945 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
SPOCK1-202ENST00000394945 MYH16Q9H6N6 1097 aa20.21■□□□□ 0.83
SPOCK1-202ENST00000394945 CDK11BP21127 795 aaKnown RBP20.21■□□□□ 0.83
SPOCK1-202ENST00000394945 TIMELESSQ9UNS1 1208 aa20.17■□□□□ 0.82
SPOCK1-202ENST00000394945 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
SPOCK1-202ENST00000394945 MSNP26038 577 aaKnown RBP20.14■□□□□ 0.82
SPOCK1-202ENST00000394945 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
SPOCK1-202ENST00000394945 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
SPOCK1-202ENST00000394945 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
SPOCK1-202ENST00000394945 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
SPOCK1-202ENST00000394945 CHMP7Q8WUX9 453 aaPredicted RBP20.11■□□□□ 0.81
SPOCK1-202ENST00000394945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.81
SPOCK1-202ENST00000394945 USP35Q9P2H5 1018 aa20.09■□□□□ 0.81
SPOCK1-202ENST00000394945 HSP90AB1P08238 724 aaKnown RBP20.09■□□□□ 0.81
SPOCK1-202ENST00000394945 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.8
SPOCK1-202ENST00000394945 KCNH8Q96L42 1107 aa20.07■□□□□ 0.8
SPOCK1-202ENST00000394945 PLCB2Q00722 1185 aa20.06■□□□□ 0.8
SPOCK1-202ENST00000394945 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
SPOCK1-202ENST00000394945 CCNB3Q8WWL7 1395 aa20.06■□□□□ 0.8
SPOCK1-202ENST00000394945 FTSJ3Q8IY81 847 aaKnown RBP20.06■□□□□ 0.8
SPOCK1-202ENST00000394945 SPRYD3Q8NCJ5 442 aa20.06■□□□□ 0.8
SPOCK1-202ENST00000394945 TSPY4P0CV99 314 aa20.06■□□□□ 0.8
SPOCK1-202ENST00000394945 TSPY10P0CW01 314 aa20.06■□□□□ 0.8
SPOCK1-202ENST00000394945 FRAT1Q92837 279 aaPredicted RBP20.05■□□□□ 0.8
SPOCK1-202ENST00000394945 GZF1Q9H116 711 aaPredicted RBP20.05■□□□□ 0.8
SPOCK1-202ENST00000394945 VSIG10Q8N0Z9 540 aa20.05■□□□□ 0.8
SPOCK1-202ENST00000394945 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
SPOCK1-202ENST00000394945 TPRNQ4KMQ1 711 aa20.04■□□□□ 0.8
SPOCK1-202ENST00000394945 HSP90AA2PQ14568 343 aaPredicted RBP20.04■□□□□ 0.8
SPOCK1-202ENST00000394945 HSCBQ8IWL3 235 aa20.04■□□□□ 0.8
SPOCK1-202ENST00000394945 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
SPOCK1-202ENST00000394945 KNSTRNQ9Y448 316 aa20.03■□□□□ 0.8
SPOCK1-202ENST00000394945 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.8
SPOCK1-202ENST00000394945 NEUROD2Q15784 382 aa20■□□□□ 0.79
SPOCK1-202ENST00000394945 AMER1Q5JTC6 1135 aaPredicted RBP20■□□□□ 0.79
SPOCK1-202ENST00000394945 ARID3AQ99856 593 aa19.99■□□□□ 0.79
SPOCK1-202ENST00000394945 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
SPOCK1-202ENST00000394945 GOLGA6L3A6NEY3 463 aa19.98■□□□□ 0.79
SPOCK1-202ENST00000394945 RCAN3Q9UKA8 241 aa19.98■□□□□ 0.79
SPOCK1-202ENST00000394945 GSE1Q14687 1217 aa19.98■□□□□ 0.79
SPOCK1-202ENST00000394945 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
SPOCK1-202ENST00000394945 CHAF1AQ13111 956 aaPredicted RBP19.96■□□□□ 0.79
SPOCK1-202ENST00000394945 CASC1Q6TDU7 716 aa19.95■□□□□ 0.78
SPOCK1-202ENST00000394945 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
SPOCK1-202ENST00000394945 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
SPOCK1-202ENST00000394945 CC2D1BQ5T0F9 858 aaKnown RBP19.93■□□□□ 0.78
SPOCK1-202ENST00000394945 CFAP53Q96M91 514 aa19.91■□□□□ 0.78
SPOCK1-202ENST00000394945 CDCA8Q53HL2 280 aa19.9■□□□□ 0.78
SPOCK1-202ENST00000394945 ZRSR1Q15695 479 aaKnown RBP19.9■□□□□ 0.78
SPOCK1-202ENST00000394945 KIF27Q86VH2 1401 aa19.89■□□□□ 0.78
SPOCK1-202ENST00000394945 ANO8Q9HCE9 1232 aaPredicted RBP19.89■□□□□ 0.78
SPOCK1-202ENST00000394945 GBP4Q96PP9 640 aa19.89■□□□□ 0.77
SPOCK1-202ENST00000394945 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.77
SPOCK1-202ENST00000394945 PPP1R15AO75807 674 aaPredicted RBP19.89■□□□□ 0.77
SPOCK1-202ENST00000394945 PRKCSHP14314 528 aaPredicted RBP19.86■□□□□ 0.77
SPOCK1-202ENST00000394945 PDE4AP27815 886 aa19.86■□□□□ 0.77
SPOCK1-202ENST00000394945 MS4A1P11836 297 aa19.86■□□□□ 0.77
SPOCK1-202ENST00000394945 ZBTB7CA1YPR0 619 aa19.85■□□□□ 0.77
SPOCK1-202ENST00000394945 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
SPOCK1-202ENST00000394945 VPS8Q8N3P4 1428 aa19.84■□□□□ 0.77
SPOCK1-202ENST00000394945 SLC4A3P48751 1232 aa19.83■□□□□ 0.76
SPOCK1-202ENST00000394945 SOGA1O94964 1423 aa19.82■□□□□ 0.76
SPOCK1-202ENST00000394945 RAB3GAP2Q9H2M9 1393 aa19.82■□□□□ 0.76
SPOCK1-202ENST00000394945 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
SPOCK1-202ENST00000394945 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
SPOCK1-202ENST00000394945 PTMSP20962 102 aa19.81■□□□□ 0.76
SPOCK1-202ENST00000394945 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
SPOCK1-202ENST00000394945 CHMP4BQ9H444 224 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms