RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
SSH2-203ENST00000394848 NUP160Q12769 1436 aa19.79■□□□□ 0.76
SSH2-203ENST00000394848 CHD1O14646 1710 aa19.79■□□□□ 0.76
SSH2-203ENST00000394848 PCGF6Q9BYE7 350 aa19.78■□□□□ 0.76
SSH2-203ENST00000394848 CLIP1P30622 1438 aa19.76■□□□□ 0.75
SSH2-203ENST00000394848 RANGAP1P46060 587 aaPredicted RBP19.74■□□□□ 0.75
SSH2-203ENST00000394848 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
SSH2-203ENST00000394848 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
SSH2-203ENST00000394848 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
SSH2-203ENST00000394848 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
SSH2-203ENST00000394848 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
SSH2-203ENST00000394848 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
SSH2-203ENST00000394848 IQGAP2Q13576 1575 aa19.61■□□□□ 0.73
SSH2-203ENST00000394848 CTTNBP2Q8WZ74 1663 aa19.59■□□□□ 0.73
SSH2-203ENST00000394848 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.73
SSH2-203ENST00000394848 UGGT2Q9NYU1 1516 aa19.54■□□□□ 0.72
SSH2-203ENST00000394848 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
SSH2-203ENST00000394848 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
SSH2-203ENST00000394848 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
SSH2-203ENST00000394848 ARHGAP35Q9NRY4 1499 aa19.5■□□□□ 0.71
SSH2-203ENST00000394848 APLP2Q06481 763 aa19.49■□□□□ 0.71
SSH2-203ENST00000394848 DISP1Q96F81 1524 aa19.48■□□□□ 0.71
SSH2-203ENST00000394848 CARMIL2Q6F5E8 1435 aa19.47■□□□□ 0.71
SSH2-203ENST00000394848 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
SSH2-203ENST00000394848 DNAJC5Q9H3Z4 198 aa19.44■□□□□ 0.7
SSH2-203ENST00000394848 EFCAB5A4FU69 1503 aa19.43■□□□□ 0.7
SSH2-203ENST00000394848 SAMD9Q5K651 1589 aa19.43■□□□□ 0.7
SSH2-203ENST00000394848 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
SSH2-203ENST00000394848 KIAA0556O60303 1618 aa19.41■□□□□ 0.7
SSH2-203ENST00000394848 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
SSH2-203ENST00000394848 P3H3Q8IVL6 736 aa19.41■□□□□ 0.7
SSH2-203ENST00000394848 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
SSH2-203ENST00000394848 PTPRGP23470 1445 aa19.35■□□□□ 0.69
SSH2-203ENST00000394848 RIMBP3CA6NJZ7 1639 aa19.33■□□□□ 0.68
SSH2-203ENST00000394848 RIMBP3BA6NNM3 1639 aa19.33■□□□□ 0.68
SSH2-203ENST00000394848 RIMBP3Q9UFD9 1639 aa19.33■□□□□ 0.68
SSH2-203ENST00000394848 FMN1Q68DA7 1419 aa19.29■□□□□ 0.68
SSH2-203ENST00000394848 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.68
SSH2-203ENST00000394848 HRCP23327 699 aa19.26■□□□□ 0.67
SSH2-203ENST00000394848 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
SSH2-203ENST00000394848 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
SSH2-203ENST00000394848 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
SSH2-203ENST00000394848 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
SSH2-203ENST00000394848 CASKIN1Q8WXD9 1431 aa19.19■□□□□ 0.66
SSH2-203ENST00000394848 ABCA8O94911 1581 aa19.19■□□□□ 0.66
SSH2-203ENST00000394848 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
SSH2-203ENST00000394848 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
SSH2-203ENST00000394848 FYCO1Q9BQS8 1478 aa19.16■□□□□ 0.66
SSH2-203ENST00000394848 ABCC2Q92887 1545 aa19.15■□□□□ 0.66
SSH2-203ENST00000394848 PCF11O94913 1555 aaKnown RBP19.15■□□□□ 0.66
SSH2-203ENST00000394848 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.65
SSH2-203ENST00000394848 TIAM1Q13009 1591 aa19.14■□□□□ 0.65
SSH2-203ENST00000394848 NUP153P49790 1475 aaKnown RBP19.13■□□□□ 0.65
SSH2-203ENST00000394848 ADCY10Q96PN6 1610 aa19.11■□□□□ 0.65
SSH2-203ENST00000394848 LRRC9Q6ZRR7 1453 aa19.1■□□□□ 0.65
SSH2-203ENST00000394848 KDM5BQ9UGL1 1544 aa19.09■□□□□ 0.65
SSH2-203ENST00000394848 HECW1Q76N89 1606 aa19.08■□□□□ 0.64
SSH2-203ENST00000394848 ATP10BO94823 1461 aa19.07■□□□□ 0.64
SSH2-203ENST00000394848 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
SSH2-203ENST00000394848 EPRSP07814 1512 aaKnown RBP19.06■□□□□ 0.64
SSH2-203ENST00000394848 ARID3CA6NKF2 412 aa19.06■□□□□ 0.64
SSH2-203ENST00000394848 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
SSH2-203ENST00000394848 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
SSH2-203ENST00000394848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.02■□□□□ 0.64
SSH2-203ENST00000394848 CFAP43Q8NDM7 1665 aa19.02■□□□□ 0.63
SSH2-203ENST00000394848 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
SSH2-203ENST00000394848 CDK13Q14004 1512 aaKnown RBP19■□□□□ 0.63
SSH2-203ENST00000394848 ZEB1P37275 1124 aaPredicted RBP18.99■□□□□ 0.63
SSH2-203ENST00000394848 CDK11AQ9UQ88 783 aaPredicted RBP18.99■□□□□ 0.63
SSH2-203ENST00000394848 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
SSH2-203ENST00000394848 ZCCHC11Q5TAX3 1644 aaKnown RBP18.98■□□□□ 0.63
SSH2-203ENST00000394848 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
SSH2-203ENST00000394848 PLEKHD1A6NEE1 506 aa18.97■□□□□ 0.63
SSH2-203ENST00000394848 LRRIQ1Q96JM4 1722 aa18.96■□□□□ 0.63
SSH2-203ENST00000394848 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
SSH2-203ENST00000394848 CCER1Q8TC90 406 aaPredicted RBP18.95■□□□□ 0.62
SSH2-203ENST00000394848 MAPKBP1O60336 1514 aa18.94■□□□□ 0.62
SSH2-203ENST00000394848 ASXL2Q76L83 1435 aa18.94■□□□□ 0.62
SSH2-203ENST00000394848 WDR7Q9Y4E6 1490 aa18.91■□□□□ 0.62
SSH2-203ENST00000394848 TROQ12816 1431 aaPredicted RBP18.9■□□□□ 0.62
SSH2-203ENST00000394848 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.61
SSH2-203ENST00000394848 KCNH8Q96L42 1107 aa18.86■□□□□ 0.61
SSH2-203ENST00000394848 ITGAEP38570 1179 aa18.86■□□□□ 0.61
SSH2-203ENST00000394848 FAM50AQ14320 339 aaKnown RBP18.86■□□□□ 0.61
SSH2-203ENST00000394848 EHBP1L1Q8N3D4 1523 aa18.85■□□□□ 0.61
SSH2-203ENST00000394848 NCOA2Q15596 1464 aa18.83■□□□□ 0.61
SSH2-203ENST00000394848 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
SSH2-203ENST00000394848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.8■□□□□ 0.6
SSH2-203ENST00000394848 FGD6Q6ZV73 1430 aa18.79■□□□□ 0.6
SSH2-203ENST00000394848 SUPT6HQ7KZ85 1726 aaKnown RBP18.78■□□□□ 0.6
SSH2-203ENST00000394848 FAM69CQ0P6D2 419 aa18.78■□□□□ 0.6
SSH2-203ENST00000394848 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.6
SSH2-203ENST00000394848 KIF14Q15058 1648 aa18.76■□□□□ 0.59
SSH2-203ENST00000394848 GLI2P10070 1586 aa18.75■□□□□ 0.59
SSH2-203ENST00000394848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.75■□□□□ 0.59
SSH2-203ENST00000394848 DIP2BQ9P265 1576 aa18.75■□□□□ 0.59
SSH2-203ENST00000394848 ABCA9Q8IUA7 1624 aa18.72■□□□□ 0.59
SSH2-203ENST00000394848 CD109Q6YHK3 1445 aa18.7■□□□□ 0.58
SSH2-203ENST00000394848 TTC37Q6PGP7 1564 aa18.7■□□□□ 0.58
SSH2-203ENST00000394848 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1052.8 ms