RNA–Protein interactions for RNA: ENST00000394576.2

PCDHGA2-201, Transcript of protocadherin gamma subfamily A, 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA2, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2-201ENST00000394576 GAPVD1Q14C86 1478 aa15.41■□□□□ 0.06
PCDHGA2-201ENST00000394576 CNGB1Q14028 1251 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA2-201ENST00000394576 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
PCDHGA2-201ENST00000394576 NESP48681 1621 aa15.39■□□□□ 0.05
PCDHGA2-201ENST00000394576 FMN1Q68DA7 1419 aa15.37■□□□□ 0.05
PCDHGA2-201ENST00000394576 ESF1Q9H501 851 aaKnown RBP15.37■□□□□ 0.05
PCDHGA2-201ENST00000394576 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
PCDHGA2-201ENST00000394576 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
PCDHGA2-201ENST00000394576 KCNH8Q96L42 1107 aa15.34■□□□□ 0.05
PCDHGA2-201ENST00000394576 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
PCDHGA2-201ENST00000394576 IGF1RP08069 1367 aa15.33■□□□□ 0.04
PCDHGA2-201ENST00000394576 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
PCDHGA2-201ENST00000394576 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
PCDHGA2-201ENST00000394576 ZNF316A6NFI3 1004 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA2-201ENST00000394576 JPH4Q96JJ6 628 aa15.31■□□□□ 0.04
PCDHGA2-201ENST00000394576 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
PCDHGA2-201ENST00000394576 CFDP1Q9UEE9 299 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA2-201ENST00000394576 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
PCDHGA2-201ENST00000394576 KANK4Q5T7N3 995 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA2-201ENST00000394576 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
PCDHGA2-201ENST00000394576 KIF21BO75037 1637 aa15.26■□□□□ 0.03
PCDHGA2-201ENST00000394576 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
PCDHGA2-201ENST00000394576 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
PCDHGA2-201ENST00000394576 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA2-201ENST00000394576 CUX1P39880 1505 aa15.23■□□□□ 0.03
PCDHGA2-201ENST00000394576 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
PCDHGA2-201ENST00000394576 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
PCDHGA2-201ENST00000394576 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
PCDHGA2-201ENST00000394576 PTPRGP23470 1445 aa15.17■□□□□ 0.02
PCDHGA2-201ENST00000394576 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
PCDHGA2-201ENST00000394576 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
PCDHGA2-201ENST00000394576 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
PCDHGA2-201ENST00000394576 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
PCDHGA2-201ENST00000394576 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
PCDHGA2-201ENST00000394576 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
PCDHGA2-201ENST00000394576 ARHGAP35Q9NRY4 1499 aa15.11■□□□□ 0.01
PCDHGA2-201ENST00000394576 ZNF326Q5BKZ1 582 aaKnown RBP15.11■□□□□ 0.01
PCDHGA2-201ENST00000394576 EFCAB2Q5VUJ9 269 aa15.11■□□□□ 0.01
PCDHGA2-201ENST00000394576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
PCDHGA2-201ENST00000394576 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
PCDHGA2-201ENST00000394576 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
PCDHGA2-201ENST00000394576 ARAP1Q96P48 1450 aa15.09■□□□□ 0.01
PCDHGA2-201ENST00000394576 MIER1Q8N108 512 aa15.09■□□□□ 0.01
PCDHGA2-201ENST00000394576 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
PCDHGA2-201ENST00000394576 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
PCDHGA2-201ENST00000394576 BIVM-ERCC5R4GMW8 1640 aa15.08■□□□□ 0
PCDHGA2-201ENST00000394576 BCANQ96GW7 911 aa15.08■□□□□ 0
PCDHGA2-201ENST00000394576 RSPH4AQ5TD94 716 aa15.07■□□□□ 0
PCDHGA2-201ENST00000394576 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
PCDHGA2-201ENST00000394576 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
PCDHGA2-201ENST00000394576 DAXXQ9UER7 740 aaPredicted RBP15.04■□□□□ -0
PCDHGA2-201ENST00000394576 CHGAP10645 457 aaKnown RBP15.04■□□□□ -0
PCDHGA2-201ENST00000394576 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
PCDHGA2-201ENST00000394576 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
PCDHGA2-201ENST00000394576 ANP32CO43423 234 aa15.02□□□□□ -0.01
PCDHGA2-201ENST00000394576 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
PCDHGA2-201ENST00000394576 CUL7Q14999 1698 aa14.98□□□□□ -0.01
PCDHGA2-201ENST00000394576 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
PCDHGA2-201ENST00000394576 ARID4BQ4LE39 1312 aaPredicted RBP14.98□□□□□ -0.01
PCDHGA2-201ENST00000394576 KIAA0586Q9BVV6 1533 aa14.98□□□□□ -0.01
PCDHGA2-201ENST00000394576 KANK1Q14678 1352 aa14.97□□□□□ -0.01
PCDHGA2-201ENST00000394576 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.01
PCDHGA2-201ENST00000394576 CYB5RLQ6IPT4 315 aa14.96□□□□□ -0.01
PCDHGA2-201ENST00000394576 PRG4Q92954 1404 aaPredicted RBP14.95□□□□□ -0.02
PCDHGA2-201ENST00000394576 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
PCDHGA2-201ENST00000394576 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
PCDHGA2-201ENST00000394576 CASKIN1Q8WXD9 1431 aa14.93□□□□□ -0.02
PCDHGA2-201ENST00000394576 SIN3AQ96ST3 1273 aa14.91□□□□□ -0.02
PCDHGA2-201ENST00000394576 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
PCDHGA2-201ENST00000394576 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
PCDHGA2-201ENST00000394576 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
PCDHGA2-201ENST00000394576 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
PCDHGA2-201ENST00000394576 FYCO1Q9BQS8 1478 aa14.86□□□□□ -0.03
PCDHGA2-201ENST00000394576 RRBP1Q9P2E9 1410 aaKnown RBP14.86□□□□□ -0.03
PCDHGA2-201ENST00000394576 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
PCDHGA2-201ENST00000394576 HIRIP3Q9BW71 556 aaPredicted RBP14.85□□□□□ -0.03
PCDHGA2-201ENST00000394576 TIMELESSQ9UNS1 1208 aa14.85□□□□□ -0.03
PCDHGA2-201ENST00000394576 PHLDB1Q86UU1 1377 aa14.85□□□□□ -0.03
PCDHGA2-201ENST00000394576 IQGAP2Q13576 1575 aa14.84□□□□□ -0.03
PCDHGA2-201ENST00000394576 PPP1R15AO75807 674 aaPredicted RBP14.84□□□□□ -0.03
PCDHGA2-201ENST00000394576 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA2-201ENST00000394576 HDGFP51858 240 aaKnown RBP14.83□□□□□ -0.04
PCDHGA2-201ENST00000394576 WDR62O43379 1518 aa14.82□□□□□ -0.04
PCDHGA2-201ENST00000394576 LRRC9Q6ZRR7 1453 aa14.81□□□□□ -0.04
PCDHGA2-201ENST00000394576 KDM2AQ9Y2K7 1162 aa14.81□□□□□ -0.04
PCDHGA2-201ENST00000394576 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
PCDHGA2-201ENST00000394576 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
PCDHGA2-201ENST00000394576 RTL5Q5HYW3 569 aaPredicted RBP14.8□□□□□ -0.04
PCDHGA2-201ENST00000394576 HNRNPMP52272 730 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHGA2-201ENST00000394576 MYOM3Q5VTT5 1437 aa14.78□□□□□ -0.04
PCDHGA2-201ENST00000394576 SLC24A1O60721 1099 aa14.77□□□□□ -0.05
PCDHGA2-201ENST00000394576 UACAQ9BZF9 1416 aa14.76□□□□□ -0.05
PCDHGA2-201ENST00000394576 TIAM1Q13009 1591 aa14.76□□□□□ -0.05
PCDHGA2-201ENST00000394576 KIF21AQ7Z4S6 1674 aa14.76□□□□□ -0.05
PCDHGA2-201ENST00000394576 EIF4G2P78344 907 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCDHGA2-201ENST00000394576 GGT6Q6P531 493 aa14.75□□□□□ -0.05
PCDHGA2-201ENST00000394576 HECW1Q76N89 1606 aa14.75□□□□□ -0.05
PCDHGA2-201ENST00000394576 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
PCDHGA2-201ENST00000394576 FAM69CQ0P6D2 419 aa14.75□□□□□ -0.05
PCDHGA2-201ENST00000394576 RGL3Q3MIN7 710 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms