RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
APLF-202ENST00000394342 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
APLF-202ENST00000394342 ARAP1Q96P48 1450 aa14.55□□□□□ -0.08
APLF-202ENST00000394342 CARMIL1Q5VZK9 1371 aa14.52□□□□□ -0.08
APLF-202ENST00000394342 ERCC6L2Q5T890 1561 aa14.48□□□□□ -0.09
APLF-202ENST00000394342 CTTNBP2Q8WZ74 1663 aa14.48□□□□□ -0.09
APLF-202ENST00000394342 KIAA0586Q9BVV6 1533 aa14.46□□□□□ -0.09
APLF-202ENST00000394342 RAPGEF2Q9Y4G8 1499 aa14.46□□□□□ -0.09
APLF-202ENST00000394342 CYB5RLQ6IPT4 315 aa14.46□□□□□ -0.09
APLF-202ENST00000394342 IQGAP2Q13576 1575 aa14.43□□□□□ -0.1
APLF-202ENST00000394342 JPH4Q96JJ6 628 aa14.42□□□□□ -0.1
APLF-202ENST00000394342 PRG4Q92954 1404 aaPredicted RBP14.41□□□□□ -0.1
APLF-202ENST00000394342 EEA1Q15075 1411 aa14.41□□□□□ -0.1
APLF-202ENST00000394342 PRXQ9BXM0 1461 aa14.39□□□□□ -0.11
APLF-202ENST00000394342 UGGT2Q9NYU1 1516 aa14.34□□□□□ -0.11
APLF-202ENST00000394342 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
APLF-202ENST00000394342 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
APLF-202ENST00000394342 CARMIL2Q6F5E8 1435 aa14.32□□□□□ -0.12
APLF-202ENST00000394342 KIF21BO75037 1637 aa14.31□□□□□ -0.12
APLF-202ENST00000394342 MSH5O43196 834 aa14.31□□□□□ -0.12
APLF-202ENST00000394342 PIAS4Q8N2W9 510 aaPredicted RBP14.31□□□□□ -0.12
APLF-202ENST00000394342 ADRA2BP18089 450 aa14.3□□□□□ -0.12
APLF-202ENST00000394342 KIAA0556O60303 1618 aa14.3□□□□□ -0.12
APLF-202ENST00000394342 DISP1Q96F81 1524 aa14.29□□□□□ -0.12
APLF-202ENST00000394342 ADCY10Q96PN6 1610 aa14.28□□□□□ -0.12
APLF-202ENST00000394342 TNIKQ9UKE5 1360 aa14.26□□□□□ -0.13
APLF-202ENST00000394342 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
APLF-202ENST00000394342 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
APLF-202ENST00000394342 PTPRGP23470 1445 aa14.24□□□□□ -0.13
APLF-202ENST00000394342 FAM9AQ8IZU1 332 aaPredicted RBP14.22□□□□□ -0.13
APLF-202ENST00000394342 SAMD9Q5K651 1589 aa14.21□□□□□ -0.14
APLF-202ENST00000394342 MAPKBP1O60336 1514 aa14.19□□□□□ -0.14
APLF-202ENST00000394342 UHRF1BP1LA0JNW5 1464 aa14.18□□□□□ -0.14
APLF-202ENST00000394342 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
APLF-202ENST00000394342 ABCC2Q92887 1545 aa14.17□□□□□ -0.14
APLF-202ENST00000394342 UACAQ9BZF9 1416 aa14.15□□□□□ -0.14
APLF-202ENST00000394342 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
APLF-202ENST00000394342 TTBK1Q5TCY1 1321 aaPredicted RBP14.15□□□□□ -0.15
APLF-202ENST00000394342 ZCCHC11Q5TAX3 1644 aaKnown RBP14.14□□□□□ -0.15
APLF-202ENST00000394342 ABCA8O94911 1581 aa14.13□□□□□ -0.15
APLF-202ENST00000394342 EFCAB5A4FU69 1503 aa14.12□□□□□ -0.15
APLF-202ENST00000394342 DIP2BQ9P265 1576 aa14.12□□□□□ -0.15
APLF-202ENST00000394342 KDM5BQ9UGL1 1544 aa14.1□□□□□ -0.15
APLF-202ENST00000394342 TSPOAP1O95153 1857 aa14.1□□□□□ -0.15
APLF-202ENST00000394342 ABCC10Q5T3U5 1492 aa14.09□□□□□ -0.15
APLF-202ENST00000394342 PLB1Q6P1J6 1458 aa14.08□□□□□ -0.16
APLF-202ENST00000394342 RAPGEF6Q8TEU7 1601 aa14.08□□□□□ -0.16
APLF-202ENST00000394342 UBTFP17480 764 aaKnown RBP14.06□□□□□ -0.16
APLF-202ENST00000394342 ASXL2Q76L83 1435 aa14.05□□□□□ -0.16
APLF-202ENST00000394342 P3H3Q8IVL6 736 aa14.04□□□□□ -0.16
APLF-202ENST00000394342 GLI2P10070 1586 aa14.04□□□□□ -0.16
APLF-202ENST00000394342 FHOD3Q2V2M9 1422 aa14.03□□□□□ -0.16
APLF-202ENST00000394342 FAM69CQ0P6D2 419 aa14.01□□□□□ -0.17
APLF-202ENST00000394342 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
APLF-202ENST00000394342 RANGAP1P46060 587 aaPredicted RBP14□□□□□ -0.17
APLF-202ENST00000394342 PPRC1Q5VV67 1664 aaKnown RBP14□□□□□ -0.17
APLF-202ENST00000394342 MAP3K4Q9Y6R4 1608 aa14□□□□□ -0.17
APLF-202ENST00000394342 ARHGAP35Q9NRY4 1499 aa13.99□□□□□ -0.17
APLF-202ENST00000394342 WDR7Q9Y4E6 1490 aa13.99□□□□□ -0.17
APLF-202ENST00000394342 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
APLF-202ENST00000394342 EPRSP07814 1512 aaKnown RBP13.98□□□□□ -0.17
APLF-202ENST00000394342 ATP10BO94823 1461 aa13.96□□□□□ -0.17
APLF-202ENST00000394342 NUP153P49790 1475 aaKnown RBP13.96□□□□□ -0.17
APLF-202ENST00000394342 HECW1Q76N89 1606 aa13.94□□□□□ -0.18
APLF-202ENST00000394342 FMN1Q68DA7 1419 aa13.94□□□□□ -0.18
APLF-202ENST00000394342 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
APLF-202ENST00000394342 KDM6BO15054 1643 aa13.9□□□□□ -0.18
APLF-202ENST00000394342 ABCA9Q8IUA7 1624 aa13.9□□□□□ -0.18
APLF-202ENST00000394342 TEX14Q8IWB6 1497 aa13.88□□□□□ -0.19
APLF-202ENST00000394342 ARID3CA6NKF2 412 aa13.88□□□□□ -0.19
APLF-202ENST00000394342 CLIP1P30622 1438 aa13.88□□□□□ -0.19
APLF-202ENST00000394342 PCF11O94913 1555 aaKnown RBP13.87□□□□□ -0.19
APLF-202ENST00000394342 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
APLF-202ENST00000394342 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
APLF-202ENST00000394342 CD109Q6YHK3 1445 aa13.84□□□□□ -0.19
APLF-202ENST00000394342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
APLF-202ENST00000394342 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
APLF-202ENST00000394342 KCNH8Q96L42 1107 aa13.84□□□□□ -0.19
APLF-202ENST00000394342 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
APLF-202ENST00000394342 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
APLF-202ENST00000394342 CCDC18Q5T9S5 1454 aa13.81□□□□□ -0.2
APLF-202ENST00000394342 PLEKHD1A6NEE1 506 aa13.81□□□□□ -0.2
APLF-202ENST00000394342 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
APLF-202ENST00000394342 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
APLF-202ENST00000394342 TTC37Q6PGP7 1564 aa13.79□□□□□ -0.2
APLF-202ENST00000394342 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
APLF-202ENST00000394342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.79□□□□□ -0.2
APLF-202ENST00000394342 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
APLF-202ENST00000394342 KIF14Q15058 1648 aa13.78□□□□□ -0.2
APLF-202ENST00000394342 CDK11AQ9UQ88 783 aaPredicted RBP13.76□□□□□ -0.21
APLF-202ENST00000394342 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
APLF-202ENST00000394342 NEO1Q92859 1461 aa13.74□□□□□ -0.21
APLF-202ENST00000394342 TROQ12816 1431 aaPredicted RBP13.74□□□□□ -0.21
APLF-202ENST00000394342 PHLDB1Q86UU1 1377 aa13.74□□□□□ -0.21
APLF-202ENST00000394342 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
APLF-202ENST00000394342 COL17A1Q9UMD9 1497 aaPredicted RBP13.74□□□□□ -0.21
APLF-202ENST00000394342 CDC42BPAQ5VT25 1732 aa13.73□□□□□ -0.21
APLF-202ENST00000394342 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
APLF-202ENST00000394342 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
APLF-202ENST00000394342 RICTORQ6R327 1708 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms