RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 CARMIL1Q5VZK9 1371 aa10.88□□□□□ -0.67
SMAD1-202ENST00000394092 ARHGAP35Q9NRY4 1499 aa10.88□□□□□ -0.67
SMAD1-202ENST00000394092 CTTNBP2Q8WZ74 1663 aa10.86□□□□□ -0.67
SMAD1-202ENST00000394092 NESP48681 1621 aa10.86□□□□□ -0.67
SMAD1-202ENST00000394092 PDS5BQ9NTI5 1447 aa10.86□□□□□ -0.67
SMAD1-202ENST00000394092 RANGAP1P46060 587 aaPredicted RBP10.85□□□□□ -0.67
SMAD1-202ENST00000394092 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
SMAD1-202ENST00000394092 EFCAB5A4FU69 1503 aa10.83□□□□□ -0.68
SMAD1-202ENST00000394092 KIF21AQ7Z4S6 1674 aa10.82□□□□□ -0.68
SMAD1-202ENST00000394092 URB2Q14146 1524 aaKnown RBP10.82□□□□□ -0.68
SMAD1-202ENST00000394092 RAD54L2Q9Y4B4 1467 aa10.82□□□□□ -0.68
SMAD1-202ENST00000394092 ABCA5Q8WWZ7 1642 aa10.82□□□□□ -0.68
SMAD1-202ENST00000394092 FHAD1B1AJZ9 1412 aa10.82□□□□□ -0.68
SMAD1-202ENST00000394092 CFAP43Q8NDM7 1665 aa10.81□□□□□ -0.68
SMAD1-202ENST00000394092 TIAM1Q13009 1591 aa10.8□□□□□ -0.68
SMAD1-202ENST00000394092 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
SMAD1-202ENST00000394092 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
SMAD1-202ENST00000394092 PPP4R3CPQ6ZMV5 832 aa10.76□□□□□ -0.69
SMAD1-202ENST00000394092 PCF11O94913 1555 aaKnown RBP10.75□□□□□ -0.69
SMAD1-202ENST00000394092 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
SMAD1-202ENST00000394092 GAPVD1Q14C86 1478 aa10.74□□□□□ -0.69
SMAD1-202ENST00000394092 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMAD1-202ENST00000394092 PBRM1Q86U86 1689 aa10.74□□□□□ -0.69
SMAD1-202ENST00000394092 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
SMAD1-202ENST00000394092 CLSPNQ9HAW4 1339 aa10.73□□□□□ -0.69
SMAD1-202ENST00000394092 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
SMAD1-202ENST00000394092 CCNB3Q8WWL7 1395 aa10.72□□□□□ -0.69
SMAD1-202ENST00000394092 LRRC9Q6ZRR7 1453 aa10.72□□□□□ -0.69
SMAD1-202ENST00000394092 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
SMAD1-202ENST00000394092 SAMD9Q5K651 1589 aa10.71□□□□□ -0.7
SMAD1-202ENST00000394092 FMN1Q68DA7 1419 aa10.71□□□□□ -0.7
SMAD1-202ENST00000394092 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.7
SMAD1-202ENST00000394092 CASKIN1Q8WXD9 1431 aa10.7□□□□□ -0.7
SMAD1-202ENST00000394092 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
SMAD1-202ENST00000394092 POTEHQ6S545 545 aa10.69□□□□□ -0.7
SMAD1-202ENST00000394092 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
SMAD1-202ENST00000394092 DNAJC5BQ9UF47 199 aa10.68□□□□□ -0.7
SMAD1-202ENST00000394092 FHOD3Q2V2M9 1422 aa10.68□□□□□ -0.7
SMAD1-202ENST00000394092 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
SMAD1-202ENST00000394092 ADAMTS12P58397 1594 aa10.66□□□□□ -0.7
SMAD1-202ENST00000394092 DHX57Q6P158 1386 aaKnown RBP10.64□□□□□ -0.71
SMAD1-202ENST00000394092 WDR62O43379 1518 aa10.64□□□□□ -0.71
SMAD1-202ENST00000394092 SNAPC4Q5SXM2 1469 aa10.64□□□□□ -0.71
SMAD1-202ENST00000394092 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
SMAD1-202ENST00000394092 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
SMAD1-202ENST00000394092 DIEXFQ68CQ4 756 aaKnown RBP10.63□□□□□ -0.71
SMAD1-202ENST00000394092 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
SMAD1-202ENST00000394092 IQGAP2Q13576 1575 aa10.62□□□□□ -0.71
SMAD1-202ENST00000394092 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMAD1-202ENST00000394092 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
SMAD1-202ENST00000394092 PHLDB1Q86UU1 1377 aa10.6□□□□□ -0.71
SMAD1-202ENST00000394092 CCDC18Q5T9S5 1454 aa10.6□□□□□ -0.71
SMAD1-202ENST00000394092 SUPT6HQ7KZ85 1726 aaKnown RBP10.6□□□□□ -0.71
SMAD1-202ENST00000394092 P3H3Q8IVL6 736 aa10.6□□□□□ -0.71
SMAD1-202ENST00000394092 HECW1Q76N89 1606 aa10.6□□□□□ -0.71
SMAD1-202ENST00000394092 LRRIQ1Q96JM4 1722 aa10.59□□□□□ -0.71
SMAD1-202ENST00000394092 MTUS2Q5JR59 1369 aa10.57□□□□□ -0.72
SMAD1-202ENST00000394092 ATP1B4Q9UN42 357 aaPredicted RBP10.57□□□□□ -0.72
SMAD1-202ENST00000394092 SETD5Q9C0A6 1442 aa10.56□□□□□ -0.72
SMAD1-202ENST00000394092 RAB3GAP2Q9H2M9 1393 aa10.55□□□□□ -0.72
SMAD1-202ENST00000394092 EIF4G3O43432 1585 aaKnown RBP10.55□□□□□ -0.72
SMAD1-202ENST00000394092 UGGT2Q9NYU1 1516 aa10.55□□□□□ -0.72
SMAD1-202ENST00000394092 FGD6Q6ZV73 1430 aa10.54□□□□□ -0.72
SMAD1-202ENST00000394092 ERCC6Q03468 1493 aa10.53□□□□□ -0.72
SMAD1-202ENST00000394092 ITGAEP38570 1179 aa10.53□□□□□ -0.72
SMAD1-202ENST00000394092 FAM50AQ14320 339 aaKnown RBP10.53□□□□□ -0.72
SMAD1-202ENST00000394092 NCOA2Q15596 1464 aa10.51□□□□□ -0.73
SMAD1-202ENST00000394092 MYOM3Q5VTT5 1437 aa10.51□□□□□ -0.73
SMAD1-202ENST00000394092 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
SMAD1-202ENST00000394092 MAPKBP1O60336 1514 aa10.51□□□□□ -0.73
SMAD1-202ENST00000394092 KIAA0556O60303 1618 aa10.51□□□□□ -0.73
SMAD1-202ENST00000394092 ARHGEF11O15085 1522 aa10.5□□□□□ -0.73
SMAD1-202ENST00000394092 KIAA0586Q9BVV6 1533 aa10.5□□□□□ -0.73
SMAD1-202ENST00000394092 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
SMAD1-202ENST00000394092 CENPBP07199 599 aaPredicted RBP10.49□□□□□ -0.73
SMAD1-202ENST00000394092 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
SMAD1-202ENST00000394092 PTPN23Q9H3S7 1636 aa10.49□□□□□ -0.73
SMAD1-202ENST00000394092 EPRSP07814 1512 aaKnown RBP10.48□□□□□ -0.73
SMAD1-202ENST00000394092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMAD1-202ENST00000394092 GCC2Q8IWJ2 1684 aa10.46□□□□□ -0.74
SMAD1-202ENST00000394092 TCOF1Q13428 1488 aaKnown RBP10.46□□□□□ -0.74
SMAD1-202ENST00000394092 HFM1A2PYH4 1435 aa10.45□□□□□ -0.74
SMAD1-202ENST00000394092 RAPGEF6Q8TEU7 1601 aa10.45□□□□□ -0.74
SMAD1-202ENST00000394092 MAGI3Q5TCQ9 1506 aa10.45□□□□□ -0.74
SMAD1-202ENST00000394092 SYNJ2O15056 1496 aa10.45□□□□□ -0.74
SMAD1-202ENST00000394092 TIMELESSQ9UNS1 1208 aa10.44□□□□□ -0.74
SMAD1-202ENST00000394092 MIA2Q96PC5 1412 aa10.43□□□□□ -0.74
SMAD1-202ENST00000394092 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
SMAD1-202ENST00000394092 AKNAQ7Z591 1439 aa10.43□□□□□ -0.74
SMAD1-202ENST00000394092 CDK13Q14004 1512 aaKnown RBP10.42□□□□□ -0.74
SMAD1-202ENST00000394092 ACIN1Q9UKV3 1341 aaKnown RBP10.42□□□□□ -0.74
SMAD1-202ENST00000394092 CEP170Q5SW79 1584 aa10.41□□□□□ -0.74
SMAD1-202ENST00000394092 UACAQ9BZF9 1416 aa10.41□□□□□ -0.74
SMAD1-202ENST00000394092 ITSN2Q9NZM3 1697 aa10.4□□□□□ -0.74
SMAD1-202ENST00000394092 NAIPQ13075 1403 aa10.39□□□□□ -0.75
SMAD1-202ENST00000394092 CARMIL2Q6F5E8 1435 aa10.39□□□□□ -0.75
SMAD1-202ENST00000394092 ADCY10Q96PN6 1610 aa10.38□□□□□ -0.75
SMAD1-202ENST00000394092 NUP160Q12769 1436 aa10.38□□□□□ -0.75
SMAD1-202ENST00000394092 NUP153P49790 1475 aaKnown RBP10.38□□□□□ -0.75
SMAD1-202ENST00000394092 CDK11AQ9UQ88 783 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms