RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 EEA1Q15075 1411 aa36.29■■■■□ 3.4
RARA-203ENST00000394086 CEP170Q5SW79 1584 aa36.28■■■■□ 3.4
RARA-203ENST00000394086 CLASP1Q7Z460 1538 aa36.26■■■■□ 3.4
RARA-203ENST00000394086 RAPGEF2Q9Y4G8 1499 aa36.23■■■■□ 3.39
RARA-203ENST00000394086 PRXQ9BXM0 1461 aa36.17■■■■□ 3.38
RARA-203ENST00000394086 ARHGEF11O15085 1522 aa36.07■■■■□ 3.36
RARA-203ENST00000394086 KIAA0586Q9BVV6 1533 aa36.04■■■■□ 3.36
RARA-203ENST00000394086 JPH4Q96JJ6 628 aa36.03■■■■□ 3.36
RARA-203ENST00000394086 RIMBP3CA6NJZ7 1639 aa36.02■■■■□ 3.36
RARA-203ENST00000394086 RIMBP3BA6NNM3 1639 aa36.02■■■■□ 3.36
RARA-203ENST00000394086 RIMBP3Q9UFD9 1639 aa36.02■■■■□ 3.36
RARA-203ENST00000394086 SHROOM2Q13796 1616 aa35.93■■■■□ 3.34
RARA-203ENST00000394086 EHMT2Q96KQ7 1210 aa35.91■■■■□ 3.34
RARA-203ENST00000394086 PRG4Q92954 1404 aaPredicted RBP35.9■■■■□ 3.34
RARA-203ENST00000394086 IQGAP2Q13576 1575 aa35.87■■■■□ 3.33
RARA-203ENST00000394086 ERCC6L2Q5T890 1561 aa35.86■■■■□ 3.33
RARA-203ENST00000394086 KIF21BO75037 1637 aa35.86■■■■□ 3.33
RARA-203ENST00000394086 CYB5RLQ6IPT4 315 aa35.84■■■■□ 3.33
RARA-203ENST00000394086 ARAP1Q96P48 1450 aa35.81■■■■□ 3.32
RARA-203ENST00000394086 CTTNBP2Q8WZ74 1663 aa35.79■■■■□ 3.32
RARA-203ENST00000394086 UBTFP17480 764 aaKnown RBP35.74■■■■□ 3.31
RARA-203ENST00000394086 GOLGA3Q08378 1498 aa35.73■■■■□ 3.31
RARA-203ENST00000394086 UGGT2Q9NYU1 1516 aa35.68■■■■□ 3.3
RARA-203ENST00000394086 CARMIL2Q6F5E8 1435 aa35.68■■■■□ 3.3
RARA-203ENST00000394086 RANGAP1P46060 587 aaPredicted RBP35.62■■■■□ 3.29
RARA-203ENST00000394086 DISP1Q96F81 1524 aa35.62■■■■□ 3.29
RARA-203ENST00000394086 TTBK1Q5TCY1 1321 aaPredicted RBP35.6■■■■□ 3.29
RARA-203ENST00000394086 TNIKQ9UKE5 1360 aa35.54■■■■□ 3.28
RARA-203ENST00000394086 PTPRGP23470 1445 aa35.52■■■■□ 3.28
RARA-203ENST00000394086 KIAA0556O60303 1618 aa35.51■■■■□ 3.28
RARA-203ENST00000394086 P3H3Q8IVL6 736 aa35.49■■■■□ 3.27
RARA-203ENST00000394086 SAMD9Q5K651 1589 aa35.37■■■■□ 3.25
RARA-203ENST00000394086 SCAF1Q9H7N4 1312 aaKnown RBP35.33■■■■□ 3.25
RARA-203ENST00000394086 EFCAB5A4FU69 1503 aa35.28■■■■□ 3.24
RARA-203ENST00000394086 FHOD3Q2V2M9 1422 aa35.28■■■■□ 3.24
RARA-203ENST00000394086 UACAQ9BZF9 1416 aa35.26■■■■□ 3.24
RARA-203ENST00000394086 ADCY10Q96PN6 1610 aa35.24■■■■□ 3.23
RARA-203ENST00000394086 NPM1P06748 294 aaKnown RBP eCLIP35.22■■■■□ 3.23
RARA-203ENST00000394086 ARHGAP35Q9NRY4 1499 aa35.21■■■■□ 3.23
RARA-203ENST00000394086 PLB1Q6P1J6 1458 aa35.2■■■■□ 3.23
RARA-203ENST00000394086 MYT1Q01538 1121 aa35.16■■■■□ 3.22
RARA-203ENST00000394086 UHRF1BP1LA0JNW5 1464 aa35.16■■■■□ 3.22
RARA-203ENST00000394086 ABCC2Q92887 1545 aa35.15■■■■□ 3.22
RARA-203ENST00000394086 CLIP1P30622 1438 aa35.14■■■■□ 3.22
RARA-203ENST00000394086 ABCA8O94911 1581 aa35.11■■■■□ 3.21
RARA-203ENST00000394086 CCER1Q8TC90 406 aaPredicted RBP35.08■■■■□ 3.21
RARA-203ENST00000394086 CEP162Q5TB80 1403 aa35.05■■■■□ 3.2
RARA-203ENST00000394086 ARID3CA6NKF2 412 aa35.03■■■■□ 3.2
RARA-203ENST00000394086 TRHP20396 242 aaPredicted RBP35.03■■■■□ 3.2
RARA-203ENST00000394086 FMN1Q68DA7 1419 aa35■■■■□ 3.19
RARA-203ENST00000394086 KDM5BQ9UGL1 1544 aa35■■■■□ 3.19
RARA-203ENST00000394086 RAPGEF6Q8TEU7 1601 aa34.99■■■■□ 3.19
RARA-203ENST00000394086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.94■■■■□ 3.18
RARA-203ENST00000394086 ATP1B4Q9UN42 357 aaPredicted RBP34.94■■■■□ 3.18
RARA-203ENST00000394086 MAPKBP1O60336 1514 aa34.94■■■■□ 3.18
RARA-203ENST00000394086 ZCCHC11Q5TAX3 1644 aaKnown RBP34.93■■■■□ 3.18
RARA-203ENST00000394086 ACIN1Q9UKV3 1341 aaKnown RBP34.9■■■■□ 3.18
RARA-203ENST00000394086 NUP153P49790 1475 aaKnown RBP34.9■■■■□ 3.18
RARA-203ENST00000394086 ASXL2Q76L83 1435 aa34.89■■■■□ 3.18
RARA-203ENST00000394086 HNRNPUL2Q1KMD3 747 aaKnown RBP34.88■■■■□ 3.17
RARA-203ENST00000394086 ATP10BO94823 1461 aa34.88■■■■□ 3.17
RARA-203ENST00000394086 CENPBP07199 599 aaPredicted RBP34.8■■■■□ 3.16
RARA-203ENST00000394086 FAM69CQ0P6D2 419 aa34.79■■■■□ 3.16
RARA-203ENST00000394086 ABCC10Q5T3U5 1492 aa34.78■■■■□ 3.16
RARA-203ENST00000394086 DIEXFQ68CQ4 756 aaKnown RBP34.76■■■■□ 3.16
RARA-203ENST00000394086 HECW1Q76N89 1606 aa34.76■■■■□ 3.15
RARA-203ENST00000394086 CASKIN1Q8WXD9 1431 aa34.76■■■■□ 3.15
RARA-203ENST00000394086 WDR7Q9Y4E6 1490 aa34.73■■■■□ 3.15
RARA-203ENST00000394086 PCF11O94913 1555 aaKnown RBP34.73■■■■□ 3.15
RARA-203ENST00000394086 KCNH8Q96L42 1107 aa34.72■■■■□ 3.15
RARA-203ENST00000394086 CDK13Q14004 1512 aaKnown RBP34.71■■■■□ 3.15
RARA-203ENST00000394086 EPRSP07814 1512 aaKnown RBP34.7■■■■□ 3.15
RARA-203ENST00000394086 DIP2BQ9P265 1576 aa34.7■■■■□ 3.15
RARA-203ENST00000394086 PLEKHD1A6NEE1 506 aa34.67■■■■□ 3.14
RARA-203ENST00000394086 FYCO1Q9BQS8 1478 aa34.67■■■■□ 3.14
RARA-203ENST00000394086 KIF13AQ9H1H9 1805 aa34.67■■■■□ 3.14
RARA-203ENST00000394086 NEUROD1Q13562 356 aa34.59■■■■□ 3.13
RARA-203ENST00000394086 CDK11AQ9UQ88 783 aaPredicted RBP34.59■■■■□ 3.13
RARA-203ENST00000394086 VPS8Q8N3P4 1428 aa34.58■■■■□ 3.13
RARA-203ENST00000394086 LRRIQ1Q96JM4 1722 aa34.58■■■■□ 3.13
RARA-203ENST00000394086 CCDC18Q5T9S5 1454 aa34.56■■■■□ 3.12
RARA-203ENST00000394086 GLI2P10070 1586 aa34.56■■■■□ 3.12
RARA-203ENST00000394086 ZNF316A6NFI3 1004 aaPredicted RBP34.47■■■■□ 3.11
RARA-203ENST00000394086 TSPOAP1O95153 1857 aa34.44■■■■□ 3.1
RARA-203ENST00000394086 TROQ12816 1431 aaPredicted RBP34.42■■■■□ 3.1
RARA-203ENST00000394086 CD109Q6YHK3 1445 aa34.42■■■■□ 3.1
RARA-203ENST00000394086 MAP3K4Q9Y6R4 1608 aa34.41■■■■□ 3.1
RARA-203ENST00000394086 MAGI3Q5TCQ9 1506 aa34.36■■■■□ 3.09
RARA-203ENST00000394086 CFAP43Q8NDM7 1665 aa34.36■■■■□ 3.09
RARA-203ENST00000394086 ABCA9Q8IUA7 1624 aa34.35■■■■□ 3.09
RARA-203ENST00000394086 GTF3C3Q9Y5Q9 886 aa34.33■■■■□ 3.09
RARA-203ENST00000394086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.33■■■■□ 3.09
RARA-203ENST00000394086 MTUS2Q5JR59 1369 aa34.32■■■■□ 3.08
RARA-203ENST00000394086 PPRC1Q5VV67 1664 aaKnown RBP34.3■■■■□ 3.08
RARA-203ENST00000394086 KIF14Q15058 1648 aa34.29■■■■□ 3.08
RARA-203ENST00000394086 APLP2Q06481 763 aa34.28■■■■□ 3.08
RARA-203ENST00000394086 TTC37Q6PGP7 1564 aa34.27■■■■□ 3.08
RARA-203ENST00000394086 TEX14Q8IWB6 1497 aa34.27■■■■□ 3.08
RARA-203ENST00000394086 TIAM1Q13009 1591 aa34.26■■■■□ 3.08
RARA-203ENST00000394086 MAP3K1Q13233 1512 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms