RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 IGF1RP08069 1367 aa30.7■■■□□ 2.51
SNRPA1-202ENST00000394082 CUL7Q14999 1698 aa30.65■■■□□ 2.5
SNRPA1-202ENST00000394082 KIAA0586Q9BVV6 1533 aa30.63■■■□□ 2.49
SNRPA1-202ENST00000394082 KIF13AQ9H1H9 1805 aa30.5■■■□□ 2.47
SNRPA1-202ENST00000394082 CARMIL1Q5VZK9 1371 aa30.48■■■□□ 2.47
SNRPA1-202ENST00000394082 MAPKBP1O60336 1514 aa30.47■■■□□ 2.47
SNRPA1-202ENST00000394082 NPM1P06748 294 aaKnown RBP eCLIP30.47■■■□□ 2.47
SNRPA1-202ENST00000394082 ABCC10Q5T3U5 1492 aa30.44■■■□□ 2.46
SNRPA1-202ENST00000394082 ADCY10Q96PN6 1610 aa30.43■■■□□ 2.46
SNRPA1-202ENST00000394082 FAM69CQ0P6D2 419 aa30.33■■■□□ 2.45
SNRPA1-202ENST00000394082 AEBP2Q6ZN18 517 aaPredicted RBP30.33■■■□□ 2.45
SNRPA1-202ENST00000394082 CARMIL2Q6F5E8 1435 aa30.32■■■□□ 2.44
SNRPA1-202ENST00000394082 DIP2BQ9P265 1576 aa30.32■■■□□ 2.44
SNRPA1-202ENST00000394082 PTPRGP23470 1445 aa30.31■■■□□ 2.44
SNRPA1-202ENST00000394082 IQGAP2Q13576 1575 aa30.28■■■□□ 2.44
SNRPA1-202ENST00000394082 TNIKQ9UKE5 1360 aa30.28■■■□□ 2.44
SNRPA1-202ENST00000394082 RAPGEF2Q9Y4G8 1499 aa30.21■■■□□ 2.43
SNRPA1-202ENST00000394082 ABCC2Q92887 1545 aa30.18■■■□□ 2.42
SNRPA1-202ENST00000394082 UHRF1BP1LA0JNW5 1464 aa30.17■■■□□ 2.42
SNRPA1-202ENST00000394082 DISP1Q96F81 1524 aa30.16■■■□□ 2.42
SNRPA1-202ENST00000394082 UGGT2Q9NYU1 1516 aa30.14■■■□□ 2.42
SNRPA1-202ENST00000394082 UACAQ9BZF9 1416 aa30.1■■■□□ 2.41
SNRPA1-202ENST00000394082 PLB1Q6P1J6 1458 aa30.09■■■□□ 2.41
SNRPA1-202ENST00000394082 ASXL2Q76L83 1435 aa30.05■■■□□ 2.4
SNRPA1-202ENST00000394082 KDM6BO15054 1643 aa30.04■■■□□ 2.4
SNRPA1-202ENST00000394082 GLI2P10070 1586 aa30.04■■■□□ 2.4
SNRPA1-202ENST00000394082 TTBK1Q5TCY1 1321 aaPredicted RBP30.03■■■□□ 2.4
SNRPA1-202ENST00000394082 KDM5BQ9UGL1 1544 aa30.01■■■□□ 2.4
SNRPA1-202ENST00000394082 KIAA0556O60303 1618 aa30■■■□□ 2.39
SNRPA1-202ENST00000394082 TSPOAP1O95153 1857 aa29.99■■■□□ 2.39
SNRPA1-202ENST00000394082 CTTNBP2Q8WZ74 1663 aa29.92■■■□□ 2.38
SNRPA1-202ENST00000394082 PRXQ9BXM0 1461 aa29.91■■■□□ 2.38
SNRPA1-202ENST00000394082 GOLGA3Q08378 1498 aa29.9■■■□□ 2.38
SNRPA1-202ENST00000394082 PPRC1Q5VV67 1664 aaKnown RBP29.88■■■□□ 2.37
SNRPA1-202ENST00000394082 EPRSP07814 1512 aaKnown RBP29.88■■■□□ 2.37
SNRPA1-202ENST00000394082 ZCCHC11Q5TAX3 1644 aaKnown RBP29.86■■■□□ 2.37
SNRPA1-202ENST00000394082 MAP3K4Q9Y6R4 1608 aa29.83■■■□□ 2.37
SNRPA1-202ENST00000394082 TEX14Q8IWB6 1497 aa29.78■■■□□ 2.36
SNRPA1-202ENST00000394082 WDR7Q9Y4E6 1490 aa29.77■■■□□ 2.36
SNRPA1-202ENST00000394082 KDM4FA0A1W2PPD8 638 aa29.76■■■□□ 2.35
SNRPA1-202ENST00000394082 ABCA8O94911 1581 aa29.76■■■□□ 2.35
SNRPA1-202ENST00000394082 COL17A1Q9UMD9 1497 aaPredicted RBP29.68■■■□□ 2.34
SNRPA1-202ENST00000394082 CSRNP3Q8WYN3 585 aa29.64■■■□□ 2.34
SNRPA1-202ENST00000394082 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
SNRPA1-202ENST00000394082 MAGI3Q5TCQ9 1506 aa29.62■■■□□ 2.33
SNRPA1-202ENST00000394082 CFAP43Q8NDM7 1665 aa29.6■■■□□ 2.33
SNRPA1-202ENST00000394082 EEA1Q15075 1411 aa29.59■■■□□ 2.33
SNRPA1-202ENST00000394082 CD109Q6YHK3 1445 aa29.58■■■□□ 2.33
SNRPA1-202ENST00000394082 SAMD9Q5K651 1589 aa29.54■■■□□ 2.32
SNRPA1-202ENST00000394082 KCNH8Q96L42 1107 aa29.51■■■□□ 2.31
SNRPA1-202ENST00000394082 ATP10BO94823 1461 aa29.5■■■□□ 2.31
SNRPA1-202ENST00000394082 ADGRL1O94910 1474 aa29.5■■■□□ 2.31
SNRPA1-202ENST00000394082 P3H3Q8IVL6 736 aa29.45■■■□□ 2.31
SNRPA1-202ENST00000394082 RAPGEF6Q8TEU7 1601 aa29.4■■■□□ 2.3
SNRPA1-202ENST00000394082 ARAP3Q8WWN8 1544 aa29.4■■■□□ 2.3
SNRPA1-202ENST00000394082 PHLDB1Q86UU1 1377 aa29.39■■■□□ 2.3
SNRPA1-202ENST00000394082 ABCA9Q8IUA7 1624 aa29.38■■■□□ 2.29
SNRPA1-202ENST00000394082 ARID3CA6NKF2 412 aa29.32■■■□□ 2.28
SNRPA1-202ENST00000394082 NUP153P49790 1475 aaKnown RBP29.3■■■□□ 2.28
SNRPA1-202ENST00000394082 KIF21BO75037 1637 aa29.3■■■□□ 2.28
SNRPA1-202ENST00000394082 NEO1Q92859 1461 aa29.27■■■□□ 2.28
SNRPA1-202ENST00000394082 EFCAB5A4FU69 1503 aa29.26■■■□□ 2.27
SNRPA1-202ENST00000394082 FHOD3Q2V2M9 1422 aa29.25■■■□□ 2.27
SNRPA1-202ENST00000394082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.21■■■□□ 2.27
SNRPA1-202ENST00000394082 HNRNPUL2Q1KMD3 747 aaKnown RBP29.21■■■□□ 2.27
SNRPA1-202ENST00000394082 PLEKHD1A6NEE1 506 aa29.17■■■□□ 2.26
SNRPA1-202ENST00000394082 RANGAP1P46060 587 aaPredicted RBP29.15■■■□□ 2.26
SNRPA1-202ENST00000394082 HECW2Q9P2P5 1572 aa29.1■■■□□ 2.25
SNRPA1-202ENST00000394082 RAPGEF3O95398 923 aa29.1■■■□□ 2.25
SNRPA1-202ENST00000394082 FRMPD1Q5SYB0 1578 aa29.06■■■□□ 2.24
SNRPA1-202ENST00000394082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.04■■■□□ 2.24
SNRPA1-202ENST00000394082 CFAP74Q9C0B2 1584 aa29.04■■■□□ 2.24
SNRPA1-202ENST00000394082 ADAMTSL3P82987 1691 aa29.02■■■□□ 2.24
SNRPA1-202ENST00000394082 FANCAO15360 1455 aa29.01■■■□□ 2.23
SNRPA1-202ENST00000394082 DENND4BO75064 1496 aaPredicted RBP29.01■■■□□ 2.23
SNRPA1-202ENST00000394082 FMN1Q68DA7 1419 aa29.01■■■□□ 2.23
SNRPA1-202ENST00000394082 AKNAQ7Z591 1439 aa29.01■■■□□ 2.23
SNRPA1-202ENST00000394082 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
SNRPA1-202ENST00000394082 UBTFP17480 764 aaKnown RBP28.98■■■□□ 2.23
SNRPA1-202ENST00000394082 RICTORQ6R327 1708 aa28.97■■■□□ 2.23
SNRPA1-202ENST00000394082 TTC37Q6PGP7 1564 aa28.96■■■□□ 2.23
SNRPA1-202ENST00000394082 CDK13Q14004 1512 aaKnown RBP28.94■■■□□ 2.22
SNRPA1-202ENST00000394082 ARHGEF40Q8TER5 1519 aa28.94■■■□□ 2.22
SNRPA1-202ENST00000394082 PTPRMP28827 1452 aa28.94■■■□□ 2.22
SNRPA1-202ENST00000394082 ARHGAP35Q9NRY4 1499 aa28.94■■■□□ 2.22
SNRPA1-202ENST00000394082 BCORL1Q5H9F3 1711 aa28.93■■■□□ 2.22
SNRPA1-202ENST00000394082 HECW1Q76N89 1606 aa28.92■■■□□ 2.22
SNRPA1-202ENST00000394082 ZMYM4Q5VZL5 1548 aa28.92■■■□□ 2.22
SNRPA1-202ENST00000394082 PLCH2O75038 1416 aa28.9■■■□□ 2.22
SNRPA1-202ENST00000394082 MAGI2Q86UL8 1455 aa28.89■■■□□ 2.22
SNRPA1-202ENST00000394082 CDK11AQ9UQ88 783 aaPredicted RBP28.88■■■□□ 2.21
SNRPA1-202ENST00000394082 ARID4BQ4LE39 1312 aaPredicted RBP28.85■■■□□ 2.21
SNRPA1-202ENST00000394082 ILDR1Q86SU0 546 aaPredicted RBP28.84■■■□□ 2.21
SNRPA1-202ENST00000394082 MADDQ8WXG6 1647 aa28.82■■■□□ 2.2
SNRPA1-202ENST00000394082 ZFYVE16Q7Z3T8 1539 aa28.8■■■□□ 2.2
SNRPA1-202ENST00000394082 POGZQ7Z3K3 1410 aa28.8■■■□□ 2.2
SNRPA1-202ENST00000394082 SCAPERQ9BY12 1400 aa28.79■■■□□ 2.2
SNRPA1-202ENST00000394082 EFCAB2Q5VUJ9 269 aa28.78■■■□□ 2.2
SNRPA1-202ENST00000394082 EHMT2Q96KQ7 1210 aa28.78■■■□□ 2.2
SNRPA1-202ENST00000394082 ATP1B4Q9UN42 357 aaPredicted RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms