RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
R3HDM2-203ENST00000393811 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
R3HDM2-203ENST00000393811 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
R3HDM2-203ENST00000393811 RRBP1Q9P2E9 1410 aaKnown RBP16.37■□□□□ 0.21
R3HDM2-203ENST00000393811 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
R3HDM2-203ENST00000393811 PPP1R15AO75807 674 aaPredicted RBP16.34■□□□□ 0.21
R3HDM2-203ENST00000393811 FAM9BQ8IZU0 186 aa16.34■□□□□ 0.21
R3HDM2-203ENST00000393811 PRXQ9BXM0 1461 aa16.3■□□□□ 0.2
R3HDM2-203ENST00000393811 TIMELESSQ9UNS1 1208 aa16.28■□□□□ 0.2
R3HDM2-203ENST00000393811 CUX2O14529 1486 aa16.28■□□□□ 0.2
R3HDM2-203ENST00000393811 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
R3HDM2-203ENST00000393811 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
R3HDM2-203ENST00000393811 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
R3HDM2-203ENST00000393811 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
R3HDM2-203ENST00000393811 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
R3HDM2-203ENST00000393811 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
R3HDM2-203ENST00000393811 PHLDB1Q86UU1 1377 aa16.24■□□□□ 0.19
R3HDM2-203ENST00000393811 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
R3HDM2-203ENST00000393811 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
R3HDM2-203ENST00000393811 RRP7BPQ9NSQ0 103 aa16.22■□□□□ 0.19
R3HDM2-203ENST00000393811 ARID3CA6NKF2 412 aa16.22■□□□□ 0.19
R3HDM2-203ENST00000393811 NBR1Q14596 966 aa16.21■□□□□ 0.19
R3HDM2-203ENST00000393811 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.18
R3HDM2-203ENST00000393811 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
R3HDM2-203ENST00000393811 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
R3HDM2-203ENST00000393811 EIF4G2P78344 907 aaKnown RBP eCLIP16.18■□□□□ 0.18
R3HDM2-203ENST00000393811 PPP4R2Q9NY27 417 aa16.17■□□□□ 0.18
R3HDM2-203ENST00000393811 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
R3HDM2-203ENST00000393811 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
R3HDM2-203ENST00000393811 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
R3HDM2-203ENST00000393811 MAPKBP1O60336 1514 aa16.14■□□□□ 0.17
R3HDM2-203ENST00000393811 LRRC9Q6ZRR7 1453 aa16.14■□□□□ 0.17
R3HDM2-203ENST00000393811 IGF1RP08069 1367 aa16.14■□□□□ 0.17
R3HDM2-203ENST00000393811 MSH5O43196 834 aa16.13■□□□□ 0.17
R3HDM2-203ENST00000393811 FHOD3Q2V2M9 1422 aa16.13■□□□□ 0.17
R3HDM2-203ENST00000393811 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
R3HDM2-203ENST00000393811 CUX1P39880 1505 aa16.12■□□□□ 0.17
R3HDM2-203ENST00000393811 ANP32AP39687 249 aaKnown RBP16.09■□□□□ 0.17
R3HDM2-203ENST00000393811 CCDC136Q96JN2 1154 aa16.09■□□□□ 0.17
R3HDM2-203ENST00000393811 TIAM1Q13009 1591 aa16.07■□□□□ 0.16
R3HDM2-203ENST00000393811 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
R3HDM2-203ENST00000393811 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
R3HDM2-203ENST00000393811 NPM2Q86SE8 214 aaKnown RBP16.06■□□□□ 0.16
R3HDM2-203ENST00000393811 FOXD1Q16676 465 aa16.06■□□□□ 0.16
R3HDM2-203ENST00000393811 DEKP35659 375 aaKnown RBP16.05■□□□□ 0.16
R3HDM2-203ENST00000393811 MYT1LQ9UL68 1186 aa16.04■□□□□ 0.16
R3HDM2-203ENST00000393811 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
R3HDM2-203ENST00000393811 NOP58Q9Y2X3 529 aaKnown RBP16.02■□□□□ 0.15
R3HDM2-203ENST00000393811 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
R3HDM2-203ENST00000393811 CCDC184Q52MB2 194 aa16■□□□□ 0.15
R3HDM2-203ENST00000393811 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
R3HDM2-203ENST00000393811 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
R3HDM2-203ENST00000393811 SALL2Q9Y467 1007 aaPredicted RBP16■□□□□ 0.15
R3HDM2-203ENST00000393811 ERICH6BQ5W0A0 696 aa15.99■□□□□ 0.15
R3HDM2-203ENST00000393811 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
R3HDM2-203ENST00000393811 L3MBTL2Q969R5 705 aa15.98■□□□□ 0.15
R3HDM2-203ENST00000393811 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
R3HDM2-203ENST00000393811 PRKRIP1Q9H875 184 aaPredicted RBP15.96■□□□□ 0.15
R3HDM2-203ENST00000393811 TMC1Q8TDI8 760 aa15.96■□□□□ 0.14
R3HDM2-203ENST00000393811 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.14
R3HDM2-203ENST00000393811 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
R3HDM2-203ENST00000393811 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
R3HDM2-203ENST00000393811 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
R3HDM2-203ENST00000393811 CFTRP13569 1480 aa15.93■□□□□ 0.14
R3HDM2-203ENST00000393811 MPHOSPH9Q99550 1183 aa15.93■□□□□ 0.14
R3HDM2-203ENST00000393811 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
R3HDM2-203ENST00000393811 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
R3HDM2-203ENST00000393811 ZNF777Q9ULD5 760 aaPredicted RBP15.9■□□□□ 0.14
R3HDM2-203ENST00000393811 MAP3K1Q13233 1512 aa15.9■□□□□ 0.14
R3HDM2-203ENST00000393811 PCF11O94913 1555 aaKnown RBP15.89■□□□□ 0.13
R3HDM2-203ENST00000393811 DAXXQ9UER7 740 aaPredicted RBP15.88■□□□□ 0.13
R3HDM2-203ENST00000393811 ZBED9Q6R2W3 1325 aa15.88■□□□□ 0.13
R3HDM2-203ENST00000393811 CASKIN1Q8WXD9 1431 aa15.86■□□□□ 0.13
R3HDM2-203ENST00000393811 RAD54L2Q9Y4B4 1467 aa15.85■□□□□ 0.13
R3HDM2-203ENST00000393811 PAK3O75914 559 aaPredicted RBP15.85■□□□□ 0.13
R3HDM2-203ENST00000393811 HFM1A2PYH4 1435 aa15.84■□□□□ 0.13
R3HDM2-203ENST00000393811 CNTLNQ9NXG0 1405 aa15.84■□□□□ 0.13
R3HDM2-203ENST00000393811 C11orf95C9JLR9 678 aaPredicted RBP15.84■□□□□ 0.13
R3HDM2-203ENST00000393811 KDM2AQ9Y2K7 1162 aa15.84■□□□□ 0.13
R3HDM2-203ENST00000393811 FYCO1Q9BQS8 1478 aa15.84■□□□□ 0.13
R3HDM2-203ENST00000393811 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.13
R3HDM2-203ENST00000393811 CCDC7Q96M83 1385 aa15.83■□□□□ 0.13
R3HDM2-203ENST00000393811 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
R3HDM2-203ENST00000393811 NUDCQ9Y266 331 aa15.82■□□□□ 0.12
R3HDM2-203ENST00000393811 NAIPQ13075 1403 aa15.82■□□□□ 0.12
R3HDM2-203ENST00000393811 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
R3HDM2-203ENST00000393811 MYOM3Q5VTT5 1437 aa15.81■□□□□ 0.12
R3HDM2-203ENST00000393811 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
R3HDM2-203ENST00000393811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.8■□□□□ 0.12
R3HDM2-203ENST00000393811 IPO9Q96P70 1041 aaKnown RBP15.8■□□□□ 0.12
R3HDM2-203ENST00000393811 NCOA2Q15596 1464 aa15.8■□□□□ 0.12
R3HDM2-203ENST00000393811 KIF7Q2M1P5 1343 aa15.8■□□□□ 0.12
R3HDM2-203ENST00000393811 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
R3HDM2-203ENST00000393811 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
R3HDM2-203ENST00000393811 AKNAQ7Z591 1439 aa15.77■□□□□ 0.11
R3HDM2-203ENST00000393811 AQRO60306 1485 aaKnown RBP eCLIP15.76■□□□□ 0.117e-7■■■□□ 18
R3HDM2-203ENST00000393811 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
R3HDM2-203ENST00000393811 NEFMP07197 916 aa15.75■□□□□ 0.11
R3HDM2-203ENST00000393811 CARD11Q9BXL7 1154 aa15.74■□□□□ 0.11
R3HDM2-203ENST00000393811 PTPN23Q9H3S7 1636 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms