RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 FAM9BQ8IZU0 186 aa22.38■■□□□ 1.17
PDZD4-202ENST00000393758 SENP3-EIF4A1A0A087X0R7 540 aa22.35■■□□□ 1.17
PDZD4-202ENST00000393758 SETD5Q9C0A6 1442 aa22.34■■□□□ 1.17
PDZD4-202ENST00000393758 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
PDZD4-202ENST00000393758 BCL11AQ9H165 835 aa22.31■■□□□ 1.16
PDZD4-202ENST00000393758 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
PDZD4-202ENST00000393758 RRP7BPQ9NSQ0 103 aa22.27■■□□□ 1.16
PDZD4-202ENST00000393758 CUX2O14529 1486 aa22.26■■□□□ 1.15
PDZD4-202ENST00000393758 PPP1R15AO75807 674 aaPredicted RBP22.25■■□□□ 1.15
PDZD4-202ENST00000393758 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
PDZD4-202ENST00000393758 MTUS2Q5JR59 1369 aa22.2■■□□□ 1.14
PDZD4-202ENST00000393758 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
PDZD4-202ENST00000393758 RRBP1Q9P2E9 1410 aaKnown RBP22.18■■□□□ 1.14
PDZD4-202ENST00000393758 CCER2I3L3R5 266 aa22.18■■□□□ 1.14
PDZD4-202ENST00000393758 PHLDB1Q86UU1 1377 aa22.14■■□□□ 1.14
PDZD4-202ENST00000393758 NBR1Q14596 966 aa22.14■■□□□ 1.13
PDZD4-202ENST00000393758 B4GALNT3Q6L9W6 998 aa22.14■■□□□ 1.13
PDZD4-202ENST00000393758 PRXQ9BXM0 1461 aa22.13■■□□□ 1.13
PDZD4-202ENST00000393758 ARHGAP35Q9NRY4 1499 aa22.12■■□□□ 1.13
PDZD4-202ENST00000393758 EIF4G2P78344 907 aaKnown RBP eCLIP22.09■■□□□ 1.13
PDZD4-202ENST00000393758 FOXD1Q16676 465 aa22.07■■□□□ 1.12
PDZD4-202ENST00000393758 WDR97A6NE52 1622 aa22.07■■□□□ 1.12
PDZD4-202ENST00000393758 FHOD3Q2V2M9 1422 aa22.06■■□□□ 1.12
PDZD4-202ENST00000393758 TIMELESSQ9UNS1 1208 aa22.06■■□□□ 1.12
PDZD4-202ENST00000393758 HSPA5P11021 654 aaKnown RBP22.05■■□□□ 1.12
PDZD4-202ENST00000393758 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
PDZD4-202ENST00000393758 TOP2BQ02880 1626 aa22.02■■□□□ 1.12
PDZD4-202ENST00000393758 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
PDZD4-202ENST00000393758 IGF1RP08069 1367 aa22.02■■□□□ 1.12
PDZD4-202ENST00000393758 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
PDZD4-202ENST00000393758 NPM2Q86SE8 214 aaKnown RBP22■■□□□ 1.11
PDZD4-202ENST00000393758 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
PDZD4-202ENST00000393758 RTL5Q5HYW3 569 aaPredicted RBP21.99■■□□□ 1.11
PDZD4-202ENST00000393758 BICRAQ9NZM4 1560 aa21.98■■□□□ 1.11
PDZD4-202ENST00000393758 PPP4R2Q9NY27 417 aa21.96■■□□□ 1.11
PDZD4-202ENST00000393758 CCDC136Q96JN2 1154 aa21.95■■□□□ 1.1
PDZD4-202ENST00000393758 CUX1P39880 1505 aa21.94■■□□□ 1.1
PDZD4-202ENST00000393758 LRRC9Q6ZRR7 1453 aa21.94■■□□□ 1.1
PDZD4-202ENST00000393758 ZNF777Q9ULD5 760 aaPredicted RBP21.93■■□□□ 1.1
PDZD4-202ENST00000393758 ANP32AP39687 249 aaKnown RBP21.89■■□□□ 1.1
PDZD4-202ENST00000393758 MSH5O43196 834 aa21.89■■□□□ 1.09
PDZD4-202ENST00000393758 MAPKBP1O60336 1514 aa21.88■■□□□ 1.09
PDZD4-202ENST00000393758 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
PDZD4-202ENST00000393758 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
PDZD4-202ENST00000393758 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
PDZD4-202ENST00000393758 TMC1Q8TDI8 760 aa21.82■■□□□ 1.08
PDZD4-202ENST00000393758 CCDC18Q5T9S5 1454 aa21.81■■□□□ 1.08
PDZD4-202ENST00000393758 WASHC2AQ641Q2 1341 aa21.8■■□□□ 1.08
PDZD4-202ENST00000393758 TIAM1Q13009 1591 aa21.8■■□□□ 1.08
PDZD4-202ENST00000393758 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
PDZD4-202ENST00000393758 PEG3Q9GZU2 1588 aa21.79■■□□□ 1.08
PDZD4-202ENST00000393758 DEKP35659 375 aaKnown RBP21.78■■□□□ 1.08
PDZD4-202ENST00000393758 MPHOSPH9Q99550 1183 aa21.77■■□□□ 1.08
PDZD4-202ENST00000393758 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
PDZD4-202ENST00000393758 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
PDZD4-202ENST00000393758 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
PDZD4-202ENST00000393758 NOP58Q9Y2X3 529 aaKnown RBP21.75■■□□□ 1.07
PDZD4-202ENST00000393758 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
PDZD4-202ENST00000393758 PRKRIP1Q9H875 184 aaPredicted RBP21.74■■□□□ 1.07
PDZD4-202ENST00000393758 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
PDZD4-202ENST00000393758 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
PDZD4-202ENST00000393758 FANCIQ9NVI1 1328 aa21.7■■□□□ 1.06
PDZD4-202ENST00000393758 FMN1Q68DA7 1419 aa21.7■■□□□ 1.06
PDZD4-202ENST00000393758 FBLN2P98095 1184 aa21.7■■□□□ 1.06
PDZD4-202ENST00000393758 DAXXQ9UER7 740 aaPredicted RBP21.7■■□□□ 1.06
PDZD4-202ENST00000393758 CFTRP13569 1480 aa21.69■■□□□ 1.06
PDZD4-202ENST00000393758 NCAPD3P42695 1498 aa21.67■■□□□ 1.06
PDZD4-202ENST00000393758 UACAQ9BZF9 1416 aa21.66■■□□□ 1.06
PDZD4-202ENST00000393758 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
PDZD4-202ENST00000393758 C11orf95C9JLR9 678 aaPredicted RBP21.64■■□□□ 1.05
PDZD4-202ENST00000393758 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
PDZD4-202ENST00000393758 RTN4Q9NQC3 1192 aaKnown RBP21.61■■□□□ 1.05
PDZD4-202ENST00000393758 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
PDZD4-202ENST00000393758 PCF11O94913 1555 aaKnown RBP21.59■■□□□ 1.05
PDZD4-202ENST00000393758 ERICH6BQ5W0A0 696 aa21.59■■□□□ 1.05
PDZD4-202ENST00000393758 ZBED9Q6R2W3 1325 aa21.56■■□□□ 1.04
PDZD4-202ENST00000393758 PAK3O75914 559 aaPredicted RBP21.56■■□□□ 1.04
PDZD4-202ENST00000393758 CASKIN1Q8WXD9 1431 aa21.56■■□□□ 1.04
PDZD4-202ENST00000393758 CARD11Q9BXL7 1154 aa21.56■■□□□ 1.04
PDZD4-202ENST00000393758 NBPF8Q3BBV2 869 aa21.55■■□□□ 1.04
PDZD4-202ENST00000393758 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
PDZD4-202ENST00000393758 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
PDZD4-202ENST00000393758 KIF7Q2M1P5 1343 aa21.53■■□□□ 1.04
PDZD4-202ENST00000393758 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
PDZD4-202ENST00000393758 NCOA2Q15596 1464 aa21.52■■□□□ 1.04
PDZD4-202ENST00000393758 MYOM3Q5VTT5 1437 aa21.52■■□□□ 1.04
PDZD4-202ENST00000393758 RGL3Q3MIN7 710 aa21.52■■□□□ 1.04
PDZD4-202ENST00000393758 CFDP1Q9UEE9 299 aaPredicted RBP21.52■■□□□ 1.04
PDZD4-202ENST00000393758 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
PDZD4-202ENST00000393758 HFM1A2PYH4 1435 aa21.52■■□□□ 1.03
PDZD4-202ENST00000393758 NAIPQ13075 1403 aa21.52■■□□□ 1.03
PDZD4-202ENST00000393758 CNTLNQ9NXG0 1405 aa21.51■■□□□ 1.03
PDZD4-202ENST00000393758 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
PDZD4-202ENST00000393758 FYCO1Q9BQS8 1478 aa21.49■■□□□ 1.03
PDZD4-202ENST00000393758 PKD2Q13563 968 aa21.48■■□□□ 1.03
PDZD4-202ENST00000393758 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
PDZD4-202ENST00000393758 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.03
PDZD4-202ENST00000393758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.47■■□□□ 1.03
PDZD4-202ENST00000393758 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
PDZD4-202ENST00000393758 NEFMP07197 916 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms