RNA–Protein interactions for RNA: ENST00000393716.6

NR1I2-202, Transcript of nuclear receptor subfamily 1 group I member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NR1I2, Length 4,417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I2-202ENST00000393716 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
NR1I2-202ENST00000393716 NAP1L5Q96NT1 182 aaPredicted RBP15.66■□□□□ 0.1
NR1I2-202ENST00000393716 CCER2I3L3R5 266 aa15.66■□□□□ 0.1
NR1I2-202ENST00000393716 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
NR1I2-202ENST00000393716 ARID3CA6NKF2 412 aa15.65■□□□□ 0.1
NR1I2-202ENST00000393716 SIN3AQ96ST3 1273 aa15.64■□□□□ 0.09
NR1I2-202ENST00000393716 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.62■□□□□ 0.09
NR1I2-202ENST00000393716 TRIM44Q96DX7 344 aaPredicted RBP15.62■□□□□ 0.09
NR1I2-202ENST00000393716 GOLGA3Q08378 1498 aa15.61■□□□□ 0.09
NR1I2-202ENST00000393716 BECN1Q14457 450 aa15.6■□□□□ 0.09
NR1I2-202ENST00000393716 EEA1Q15075 1411 aa15.59■□□□□ 0.09
NR1I2-202ENST00000393716 KCNH8Q96L42 1107 aa15.56■□□□□ 0.08
NR1I2-202ENST00000393716 CHIC2Q9UKJ5 165 aa15.56■□□□□ 0.08
NR1I2-202ENST00000393716 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
NR1I2-202ENST00000393716 FANCIQ9NVI1 1328 aa15.54■□□□□ 0.08
NR1I2-202ENST00000393716 IPO9Q96P70 1041 aaKnown RBP15.53■□□□□ 0.08
NR1I2-202ENST00000393716 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
NR1I2-202ENST00000393716 WDR43Q15061 677 aaKnown RBP eCLIP15.46■□□□□ 0.07
NR1I2-202ENST00000393716 RGS3P49796 1198 aa15.46■□□□□ 0.06
NR1I2-202ENST00000393716 TNNT2P45379 298 aaPredicted RBP15.45■□□□□ 0.06
NR1I2-202ENST00000393716 TIMELESSQ9UNS1 1208 aa15.44■□□□□ 0.06
NR1I2-202ENST00000393716 ZNF777Q9ULD5 760 aaPredicted RBP15.43■□□□□ 0.06
NR1I2-202ENST00000393716 ANO8Q9HCE9 1232 aaPredicted RBP15.42■□□□□ 0.06
NR1I2-202ENST00000393716 L1TD1Q5T7N2 865 aaKnown RBP15.41■□□□□ 0.06
NR1I2-202ENST00000393716 RRP7BPQ9NSQ0 103 aa15.41■□□□□ 0.06
NR1I2-202ENST00000393716 CCNB3Q8WWL7 1395 aa15.41■□□□□ 0.06
NR1I2-202ENST00000393716 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
NR1I2-202ENST00000393716 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
NR1I2-202ENST00000393716 PNNQ9H307 717 aaKnown RBP15.39■□□□□ 0.05
NR1I2-202ENST00000393716 ARID4BQ4LE39 1312 aaPredicted RBP15.39■□□□□ 0.05
NR1I2-202ENST00000393716 MTUS2Q5JR59 1369 aa15.38■□□□□ 0.05
NR1I2-202ENST00000393716 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
NR1I2-202ENST00000393716 USP35Q9P2H5 1018 aa15.37■□□□□ 0.05
NR1I2-202ENST00000393716 GOLGA6L22H0YM25 854 aa15.37■□□□□ 0.05
NR1I2-202ENST00000393716 SOGA1O94964 1423 aa15.35■□□□□ 0.05
NR1I2-202ENST00000393716 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
NR1I2-202ENST00000393716 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.04
NR1I2-202ENST00000393716 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.04
NR1I2-202ENST00000393716 VPS8Q8N3P4 1428 aa15.33■□□□□ 0.04
NR1I2-202ENST00000393716 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
NR1I2-202ENST00000393716 DNTTIP2Q5QJE6 756 aaKnown RBP15.31■□□□□ 0.04
NR1I2-202ENST00000393716 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
NR1I2-202ENST00000393716 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
NR1I2-202ENST00000393716 HSPA5P11021 654 aaKnown RBP15.3■□□□□ 0.04
NR1I2-202ENST00000393716 PTMAP06454 111 aaKnown RBP15.3■□□□□ 0.04
NR1I2-202ENST00000393716 PPP1R15AO75807 674 aaPredicted RBP15.29■□□□□ 0.04
NR1I2-202ENST00000393716 GSE1Q14687 1217 aa15.29■□□□□ 0.04
NR1I2-202ENST00000393716 KANK4Q5T7N3 995 aaPredicted RBP15.28■□□□□ 0.04
NR1I2-202ENST00000393716 DHX57Q6P158 1386 aaKnown RBP15.28■□□□□ 0.04
NR1I2-202ENST00000393716 SETD5Q9C0A6 1442 aa15.27■□□□□ 0.04
NR1I2-202ENST00000393716 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.03
NR1I2-202ENST00000393716 RAB3GAP2Q9H2M9 1393 aa15.26■□□□□ 0.03
NR1I2-202ENST00000393716 NUDCQ9Y266 331 aa15.26■□□□□ 0.03
NR1I2-202ENST00000393716 SLKQ9H2G2 1235 aaPredicted RBP15.25■□□□□ 0.03
NR1I2-202ENST00000393716 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
NR1I2-202ENST00000393716 RCAN3Q9UKA8 241 aa15.24■□□□□ 0.03
NR1I2-202ENST00000393716 IL27Q8NEV9 243 aa15.23■□□□□ 0.03
NR1I2-202ENST00000393716 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
NR1I2-202ENST00000393716 MSNP26038 577 aaKnown RBP15.22■□□□□ 0.03
NR1I2-202ENST00000393716 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
NR1I2-202ENST00000393716 PDE4AP27815 886 aa15.21■□□□□ 0.03
NR1I2-202ENST00000393716 GOLGA6L3A6NEY3 463 aa15.19■□□□□ 0.02
NR1I2-202ENST00000393716 CDK11BP21127 795 aaKnown RBP15.18■□□□□ 0.02
NR1I2-202ENST00000393716 SLC4A3P48751 1232 aa15.18■□□□□ 0.02
NR1I2-202ENST00000393716 SLC24A1O60721 1099 aa15.18■□□□□ 0.02
NR1I2-202ENST00000393716 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
NR1I2-202ENST00000393716 HSP90AB1P08238 724 aaKnown RBP15.17■□□□□ 0.02
NR1I2-202ENST00000393716 FRAT1Q92837 279 aaPredicted RBP15.17■□□□□ 0.02
NR1I2-202ENST00000393716 ARID3AQ99856 593 aa15.16■□□□□ 0.02
NR1I2-202ENST00000393716 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
NR1I2-202ENST00000393716 MSH5O43196 834 aa15.16■□□□□ 0.02
NR1I2-202ENST00000393716 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
NR1I2-202ENST00000393716 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
NR1I2-202ENST00000393716 MYH16Q9H6N6 1097 aa15.14■□□□□ 0.01
NR1I2-202ENST00000393716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.019e-6■■■□□ 18.9
NR1I2-202ENST00000393716 ESF1Q9H501 851 aaKnown RBP15.13■□□□□ 0.01
NR1I2-202ENST00000393716 KNSTRNQ9Y448 316 aa15.13■□□□□ 0.01
NR1I2-202ENST00000393716 CC2D1BQ5T0F9 858 aaKnown RBP15.12■□□□□ 0.01
NR1I2-202ENST00000393716 FTSJ3Q8IY81 847 aaKnown RBP15.12■□□□□ 0.01
NR1I2-202ENST00000393716 ZBED9Q6R2W3 1325 aa15.12■□□□□ 0.01
NR1I2-202ENST00000393716 TSPY4P0CV99 314 aa15.11■□□□□ 0.01
NR1I2-202ENST00000393716 TSPY10P0CW01 314 aa15.11■□□□□ 0.01
NR1I2-202ENST00000393716 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
NR1I2-202ENST00000393716 RGL3Q3MIN7 710 aa15.11■□□□□ 0.01
NR1I2-202ENST00000393716 BRPF3Q9ULD4 1205 aa15.11■□□□□ 0.01
NR1I2-202ENST00000393716 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
NR1I2-202ENST00000393716 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
NR1I2-202ENST00000393716 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
NR1I2-202ENST00000393716 PKNOX2Q96KN3 472 aa15.09■□□□□ 0.01
NR1I2-202ENST00000393716 PLCB2Q00722 1185 aa15.09■□□□□ 0.01
NR1I2-202ENST00000393716 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0.01
NR1I2-202ENST00000393716 ABCC8Q09428 1581 aa15.08■□□□□ 0
NR1I2-202ENST00000393716 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
NR1I2-202ENST00000393716 EXOC6Q8TAG9 804 aa15.08■□□□□ 0
NR1I2-202ENST00000393716 TPRNQ4KMQ1 711 aa15.08■□□□□ 0
NR1I2-202ENST00000393716 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
NR1I2-202ENST00000393716 KIF27Q86VH2 1401 aa15.07■□□□□ 0
NR1I2-202ENST00000393716 NFKBIBQ15653 356 aa15.06■□□□□ 0
NR1I2-202ENST00000393716 MS4A1P11836 297 aa15.06■□□□□ 0
NR1I2-202ENST00000393716 GBP4Q96PP9 640 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms