RNA–Protein interactions for RNA: ENST00000393648.6

FGFR4-203, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FGFR4, Length 2,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-203ENST00000393648 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.827e-7■■■■■ 37
FGFR4-203ENST00000393648 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
FGFR4-203ENST00000393648 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
FGFR4-203ENST00000393648 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.81
FGFR4-203ENST00000393648 CUL7Q14999 1698 aa26.36■■□□□ 1.81
FGFR4-203ENST00000393648 HNRNPUL2Q1KMD3 747 aaKnown RBP26.31■■□□□ 1.8
FGFR4-203ENST00000393648 ZNF608Q9ULD9 1512 aaPredicted RBP26.3■■□□□ 1.8
FGFR4-203ENST00000393648 ATP1B4Q9UN42 357 aaPredicted RBP26.28■■□□□ 1.8
FGFR4-203ENST00000393648 WDR62O43379 1518 aa26.27■■□□□ 1.8
FGFR4-203ENST00000393648 CCER1Q8TC90 406 aaPredicted RBP26.27■■□□□ 1.8
FGFR4-203ENST00000393648 FHOD3Q2V2M9 1422 aa26.26■■□□□ 1.79
FGFR4-203ENST00000393648 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
FGFR4-203ENST00000393648 CTTNBP2Q8WZ74 1663 aa26.16■■□□□ 1.78
FGFR4-203ENST00000393648 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
FGFR4-203ENST00000393648 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
FGFR4-203ENST00000393648 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.78
FGFR4-203ENST00000393648 CENPBP07199 599 aaPredicted RBP26.13■■□□□ 1.77
FGFR4-203ENST00000393648 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
FGFR4-203ENST00000393648 EFCAB5A4FU69 1503 aa26.07■■□□□ 1.76
FGFR4-203ENST00000393648 PCF11O94913 1555 aaKnown RBP26.07■■□□□ 1.76
FGFR4-203ENST00000393648 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
FGFR4-203ENST00000393648 TIAM1Q13009 1591 aa26.04■■□□□ 1.76
FGFR4-203ENST00000393648 SNAPC4Q5SXM2 1469 aa26.03■■□□□ 1.76
FGFR4-203ENST00000393648 EIF4G3O43432 1585 aaKnown RBP26.02■■□□□ 1.76
FGFR4-203ENST00000393648 FBLN2P98095 1184 aa26.01■■□□□ 1.75
FGFR4-203ENST00000393648 ITGAEP38570 1179 aa25.98■■□□□ 1.75
FGFR4-203ENST00000393648 DIEXFQ68CQ4 756 aaKnown RBP25.98■■□□□ 1.75
FGFR4-203ENST00000393648 LRRC9Q6ZRR7 1453 aa25.97■■□□□ 1.75
FGFR4-203ENST00000393648 FMN1Q68DA7 1419 aa25.96■■□□□ 1.75
FGFR4-203ENST00000393648 CASKIN1Q8WXD9 1431 aa25.96■■□□□ 1.75
FGFR4-203ENST00000393648 SAMD9Q5K651 1589 aa25.95■■□□□ 1.74
FGFR4-203ENST00000393648 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
FGFR4-203ENST00000393648 MAP3K1Q13233 1512 aa25.93■■□□□ 1.74
FGFR4-203ENST00000393648 FYCO1Q9BQS8 1478 aa25.93■■□□□ 1.74
FGFR4-203ENST00000393648 RRBP1Q9P2E9 1410 aaKnown RBP25.93■■□□□ 1.74
FGFR4-203ENST00000393648 CCNB3Q8WWL7 1395 aa25.92■■□□□ 1.74
FGFR4-203ENST00000393648 IQGAP2Q13576 1575 aa25.91■■□□□ 1.74
FGFR4-203ENST00000393648 PHLDB1Q86UU1 1377 aa25.9■■□□□ 1.74
FGFR4-203ENST00000393648 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
FGFR4-203ENST00000393648 ARID3CA6NKF2 412 aa25.87■■□□□ 1.73
FGFR4-203ENST00000393648 CFAP43Q8NDM7 1665 aa25.83■■□□□ 1.73
FGFR4-203ENST00000393648 FAM50AQ14320 339 aaKnown RBP25.82■■□□□ 1.72
FGFR4-203ENST00000393648 MAGI1Q96QZ7 1491 aaPredicted RBP25.81■■□□□ 1.72
FGFR4-203ENST00000393648 KIAA0586Q9BVV6 1533 aa25.8■■□□□ 1.72
FGFR4-203ENST00000393648 MTUS2Q5JR59 1369 aa25.78■■□□□ 1.72
FGFR4-203ENST00000393648 SYNJ2O15056 1496 aa25.78■■□□□ 1.72
FGFR4-203ENST00000393648 YTHDC1Q96MU7 727 aaKnown RBP25.77■■□□□ 1.72
FGFR4-203ENST00000393648 LRRIQ1Q96JM4 1722 aa25.74■■□□□ 1.71
FGFR4-203ENST00000393648 UGGT2Q9NYU1 1516 aa25.73■■□□□ 1.71
FGFR4-203ENST00000393648 DISP1Q96F81 1524 aa25.71■■□□□ 1.71
FGFR4-203ENST00000393648 CEP170Q5SW79 1584 aa25.71■■□□□ 1.71
FGFR4-203ENST00000393648 JPH4Q96JJ6 628 aa25.66■■□□□ 1.7
FGFR4-203ENST00000393648 KIAA0556O60303 1618 aa25.63■■□□□ 1.69
FGFR4-203ENST00000393648 CDK13Q14004 1512 aaKnown RBP25.63■■□□□ 1.69
FGFR4-203ENST00000393648 MAGI3Q5TCQ9 1506 aa25.62■■□□□ 1.69
FGFR4-203ENST00000393648 EPRSP07814 1512 aaKnown RBP25.61■■□□□ 1.69
FGFR4-203ENST00000393648 DHX57Q6P158 1386 aaKnown RBP25.61■■□□□ 1.69
FGFR4-203ENST00000393648 NUP160Q12769 1436 aa25.6■■□□□ 1.69
FGFR4-203ENST00000393648 NCOA2Q15596 1464 aa25.6■■□□□ 1.69
FGFR4-203ENST00000393648 FGD6Q6ZV73 1430 aa25.57■■□□□ 1.68
FGFR4-203ENST00000393648 HECW1Q76N89 1606 aa25.57■■□□□ 1.68
FGFR4-203ENST00000393648 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
FGFR4-203ENST00000393648 CCDC18Q5T9S5 1454 aa25.56■■□□□ 1.68
FGFR4-203ENST00000393648 EHBP1L1Q8N3D4 1523 aa25.52■■□□□ 1.68
FGFR4-203ENST00000393648 PLB1Q6P1J6 1458 aa25.5■■□□□ 1.67
FGFR4-203ENST00000393648 MYOM3Q5VTT5 1437 aa25.5■■□□□ 1.67
FGFR4-203ENST00000393648 NUP153P49790 1475 aaKnown RBP25.49■■□□□ 1.67
FGFR4-203ENST00000393648 CARMIL2Q6F5E8 1435 aa25.48■■□□□ 1.67
FGFR4-203ENST00000393648 SETD5Q9C0A6 1442 aa25.48■■□□□ 1.67
FGFR4-203ENST00000393648 SUPT6HQ7KZ85 1726 aaKnown RBP25.47■■□□□ 1.67
FGFR4-203ENST00000393648 PTPRKQ15262 1439 aa25.43■■□□□ 1.66
FGFR4-203ENST00000393648 RAPGEF6Q8TEU7 1601 aa25.43■■□□□ 1.66
FGFR4-203ENST00000393648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.43■■□□□ 1.663e-6■□□□□ 9
FGFR4-203ENST00000393648 ARHGEF11O15085 1522 aa25.4■■□□□ 1.66
FGFR4-203ENST00000393648 PRG4Q92954 1404 aaPredicted RBP25.39■■□□□ 1.66
FGFR4-203ENST00000393648 CLSPNQ9HAW4 1339 aa25.38■■□□□ 1.65
FGFR4-203ENST00000393648 CHIC2Q9UKJ5 165 aa25.37■■□□□ 1.65
FGFR4-203ENST00000393648 CHD1O14646 1710 aa25.37■■□□□ 1.65
FGFR4-203ENST00000393648 ZNF316A6NFI3 1004 aaPredicted RBP25.36■■□□□ 1.65
FGFR4-203ENST00000393648 CDK11AQ9UQ88 783 aaPredicted RBP25.36■■□□□ 1.65
FGFR4-203ENST00000393648 PTPN23Q9H3S7 1636 aa25.33■■□□□ 1.65
FGFR4-203ENST00000393648 MIER1Q8N108 512 aa25.32■■□□□ 1.64
FGFR4-203ENST00000393648 ZNF644Q9H582 1327 aaPredicted RBP25.3■■□□□ 1.64
FGFR4-203ENST00000393648 RRP7BPQ9NSQ0 103 aa25.3■■□□□ 1.64
FGFR4-203ENST00000393648 PTPRGP23470 1445 aa25.28■■□□□ 1.64
FGFR4-203ENST00000393648 MAPKBP1O60336 1514 aa25.26■■□□□ 1.63
FGFR4-203ENST00000393648 BCL11AQ9H165 835 aa25.26■■□□□ 1.63
FGFR4-203ENST00000393648 SIN3AQ96ST3 1273 aa25.25■■□□□ 1.63
FGFR4-203ENST00000393648 TROQ12816 1431 aaPredicted RBP25.24■■□□□ 1.63
FGFR4-203ENST00000393648 HFM1A2PYH4 1435 aa25.22■■□□□ 1.63
FGFR4-203ENST00000393648 MIA2Q96PC5 1412 aa25.22■■□□□ 1.63
FGFR4-203ENST00000393648 TCOF1Q13428 1488 aaKnown RBP25.22■■□□□ 1.63
FGFR4-203ENST00000393648 PLEKHD1A6NEE1 506 aa25.21■■□□□ 1.63
FGFR4-203ENST00000393648 NAIPQ13075 1403 aa25.21■■□□□ 1.63
FGFR4-203ENST00000393648 ATP10BO94823 1461 aa25.21■■□□□ 1.63
FGFR4-203ENST00000393648 ABCA8O94911 1581 aa25.21■■□□□ 1.63
FGFR4-203ENST00000393648 ZNF777Q9ULD5 760 aaPredicted RBP25.21■■□□□ 1.63
FGFR4-203ENST00000393648 ERCC6L2Q5T890 1561 aa25.2■■□□□ 1.62
FGFR4-203ENST00000393648 CFDP1Q9UEE9 299 aaPredicted RBP25.18■■□□□ 1.62
FGFR4-203ENST00000393648 KIF14Q15058 1648 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms