RNA–Protein interactions for RNA: ENST00000393389.7

ANKRD42-202, Transcript of ankyrin repeat domain 42, humanhuman

TSL 1 (best) BASIC

Gene ANKRD42, Length 4,066 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42-202ENST00000393389 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
ANKRD42-202ENST00000393389 DHX57Q6P158 1386 aaKnown RBP11.94□□□□□ -0.5
ANKRD42-202ENST00000393389 CLSPNQ9HAW4 1339 aa11.93□□□□□ -0.5
ANKRD42-202ENST00000393389 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
ANKRD42-202ENST00000393389 CUX2O14529 1486 aa11.92□□□□□ -0.5
ANKRD42-202ENST00000393389 FOXD1Q16676 465 aa11.92□□□□□ -0.5
ANKRD42-202ENST00000393389 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
ANKRD42-202ENST00000393389 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
ANKRD42-202ENST00000393389 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.5
ANKRD42-202ENST00000393389 NBR1Q14596 966 aa11.9□□□□□ -0.5
ANKRD42-202ENST00000393389 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
ANKRD42-202ENST00000393389 TSHZ2Q9NRE2 1034 aa11.9□□□□□ -0.5
ANKRD42-202ENST00000393389 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.51
ANKRD42-202ENST00000393389 EIF4G2P78344 907 aaKnown RBP eCLIP11.88□□□□□ -0.51
ANKRD42-202ENST00000393389 ANP32EQ9BTT0 268 aa11.86□□□□□ -0.51
ANKRD42-202ENST00000393389 SETD5Q9C0A6 1442 aa11.84□□□□□ -0.51
ANKRD42-202ENST00000393389 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
ANKRD42-202ENST00000393389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.51
ANKRD42-202ENST00000393389 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
ANKRD42-202ENST00000393389 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
ANKRD42-202ENST00000393389 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
ANKRD42-202ENST00000393389 RBM19Q9Y4C8 960 aaKnown RBP11.82□□□□□ -0.52
ANKRD42-202ENST00000393389 PPP1R15AO75807 674 aaPredicted RBP11.81□□□□□ -0.52
ANKRD42-202ENST00000393389 HSPA5P11021 654 aaKnown RBP11.79□□□□□ -0.52
ANKRD42-202ENST00000393389 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
ANKRD42-202ENST00000393389 BCL11AQ9H165 835 aa11.79□□□□□ -0.52
ANKRD42-202ENST00000393389 FHOD3Q2V2M9 1422 aa11.79□□□□□ -0.52
ANKRD42-202ENST00000393389 BICRAQ9NZM4 1560 aa11.78□□□□□ -0.52
ANKRD42-202ENST00000393389 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
ANKRD42-202ENST00000393389 UNC13AQ9UPW8 1703 aa11.78□□□□□ -0.52
ANKRD42-202ENST00000393389 TDRD9Q8NDG6 1382 aaKnown RBP11.78□□□□□ -0.52
ANKRD42-202ENST00000393389 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
ANKRD42-202ENST00000393389 KIF21BO75037 1637 aa11.76□□□□□ -0.53
ANKRD42-202ENST00000393389 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
ANKRD42-202ENST00000393389 ARAP1Q96P48 1450 aa11.73□□□□□ -0.53
ANKRD42-202ENST00000393389 FHAD1B1AJZ9 1412 aa11.73□□□□□ -0.53
ANKRD42-202ENST00000393389 PLPPR3Q6T4P5 718 aa11.72□□□□□ -0.53
ANKRD42-202ENST00000393389 ARHGAP35Q9NRY4 1499 aa11.71□□□□□ -0.54
ANKRD42-202ENST00000393389 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.54
ANKRD42-202ENST00000393389 CHMP7Q8WUX9 453 aaPredicted RBP11.7□□□□□ -0.54
ANKRD42-202ENST00000393389 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
ANKRD42-202ENST00000393389 CCER2I3L3R5 266 aa11.7□□□□□ -0.54
ANKRD42-202ENST00000393389 L3MBTL2Q969R5 705 aa11.7□□□□□ -0.54
ANKRD42-202ENST00000393389 TSPY4P0CV99 314 aa11.69□□□□□ -0.54
ANKRD42-202ENST00000393389 TSPY10P0CW01 314 aa11.69□□□□□ -0.54
ANKRD42-202ENST00000393389 EIF4G1Q04637 1599 aaKnown RBP11.69□□□□□ -0.54
ANKRD42-202ENST00000393389 IGF1RP08069 1367 aa11.68□□□□□ -0.54
ANKRD42-202ENST00000393389 CARD11Q9BXL7 1154 aa11.68□□□□□ -0.54
ANKRD42-202ENST00000393389 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
ANKRD42-202ENST00000393389 MPHOSPH9Q99550 1183 aa11.67□□□□□ -0.54
ANKRD42-202ENST00000393389 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
ANKRD42-202ENST00000393389 CANXP27824 592 aaKnown RBP11.66□□□□□ -0.54
ANKRD42-202ENST00000393389 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
ANKRD42-202ENST00000393389 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
ANKRD42-202ENST00000393389 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
ANKRD42-202ENST00000393389 CADPSQ9ULU8 1353 aa11.63□□□□□ -0.55
ANKRD42-202ENST00000393389 CC2D1BQ5T0F9 858 aaKnown RBP11.62□□□□□ -0.55
ANKRD42-202ENST00000393389 DCAF11Q8TEB1 546 aa11.62□□□□□ -0.55
ANKRD42-202ENST00000393389 LAS1LQ9Y4W2 734 aaKnown RBP11.61□□□□□ -0.55
ANKRD42-202ENST00000393389 PKD2Q13563 968 aa11.61□□□□□ -0.55
ANKRD42-202ENST00000393389 PLEKHD1A6NEE1 506 aa11.6□□□□□ -0.55
ANKRD42-202ENST00000393389 ARXQ96QS3 562 aa11.6□□□□□ -0.55
ANKRD42-202ENST00000393389 RAD54L2Q9Y4B4 1467 aa11.6□□□□□ -0.55
ANKRD42-202ENST00000393389 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
ANKRD42-202ENST00000393389 CCDC184Q52MB2 194 aa11.57□□□□□ -0.56
ANKRD42-202ENST00000393389 ZNF644Q9H582 1327 aaPredicted RBP11.57□□□□□ -0.56
ANKRD42-202ENST00000393389 FGD5Q6ZNL6 1462 aa11.56□□□□□ -0.56
ANKRD42-202ENST00000393389 PRXQ9BXM0 1461 aa11.56□□□□□ -0.56
ANKRD42-202ENST00000393389 WDR43Q15061 677 aaKnown RBP eCLIP11.56□□□□□ -0.56
ANKRD42-202ENST00000393389 RRBP1Q9P2E9 1410 aaKnown RBP11.55□□□□□ -0.56
ANKRD42-202ENST00000393389 FMN1Q68DA7 1419 aa11.55□□□□□ -0.56
ANKRD42-202ENST00000393389 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
ANKRD42-202ENST00000393389 NOP58Q9Y2X3 529 aaKnown RBP11.54□□□□□ -0.56
ANKRD42-202ENST00000393389 CCDC18Q5T9S5 1454 aa11.54□□□□□ -0.56
ANKRD42-202ENST00000393389 NEUROD2Q15784 382 aa11.54□□□□□ -0.56
ANKRD42-202ENST00000393389 LRRC9Q6ZRR7 1453 aa11.54□□□□□ -0.56
ANKRD42-202ENST00000393389 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
ANKRD42-202ENST00000393389 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
ANKRD42-202ENST00000393389 TNNT2P45379 298 aaPredicted RBP11.52□□□□□ -0.56
ANKRD42-202ENST00000393389 RGS3P49796 1198 aa11.52□□□□□ -0.57
ANKRD42-202ENST00000393389 CUX1P39880 1505 aa11.52□□□□□ -0.57
ANKRD42-202ENST00000393389 EIF5BO60841 1220 aaKnown RBP11.51□□□□□ -0.57
ANKRD42-202ENST00000393389 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
ANKRD42-202ENST00000393389 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
ANKRD42-202ENST00000393389 AEBP2Q6ZN18 517 aaPredicted RBP11.5□□□□□ -0.57
ANKRD42-202ENST00000393389 FANCD2Q9BXW9 1451 aa11.5□□□□□ -0.57
ANKRD42-202ENST00000393389 FGD6Q6ZV73 1430 aa11.49□□□□□ -0.57
ANKRD42-202ENST00000393389 ST20-MTHFSA0A0A6YYL1 179 aa11.48□□□□□ -0.57
ANKRD42-202ENST00000393389 HNRNPMP52272 730 aaKnown RBP eCLIP11.48□□□□□ -0.57
ANKRD42-202ENST00000393389 NUP155O75694 1391 aa11.48□□□□□ -0.57
ANKRD42-202ENST00000393389 NEFMP07197 916 aa11.47□□□□□ -0.57
ANKRD42-202ENST00000393389 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
ANKRD42-202ENST00000393389 PLIN1O60240 522 aa11.46□□□□□ -0.57
ANKRD42-202ENST00000393389 NESP48681 1621 aa11.46□□□□□ -0.57
ANKRD42-202ENST00000393389 KNSTRNQ9Y448 316 aa11.46□□□□□ -0.57
ANKRD42-202ENST00000393389 NBPF8Q3BBV2 869 aa11.45□□□□□ -0.58
ANKRD42-202ENST00000393389 ERICH3Q5RHP9 1530 aa11.44□□□□□ -0.58
ANKRD42-202ENST00000393389 KIF7Q2M1P5 1343 aa11.44□□□□□ -0.58
ANKRD42-202ENST00000393389 NUDCQ9Y266 331 aa11.44□□□□□ -0.58
ANKRD42-202ENST00000393389 C11orf95C9JLR9 678 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms