RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 EIF4G3O43432 1585 aaKnown RBP35.63■■■■□ 3.3
PICALM-202ENST00000393346 VPS8Q8N3P4 1428 aa35.6■■■■□ 3.29
PICALM-202ENST00000393346 CTTNBP2Q8WZ74 1663 aa35.58■■■■□ 3.29
PICALM-202ENST00000393346 ARHGAP35Q9NRY4 1499 aa35.55■■■■□ 3.28
PICALM-202ENST00000393346 FHAD1B1AJZ9 1412 aa35.55■■■■□ 3.28
PICALM-202ENST00000393346 ARAP1Q96P48 1450 aa35.55■■■■□ 3.28
PICALM-202ENST00000393346 ADAMTS12P58397 1594 aa35.54■■■■□ 3.28
PICALM-202ENST00000393346 SCAF1Q9H7N4 1312 aaKnown RBP35.53■■■■□ 3.28
PICALM-202ENST00000393346 SNAPC4Q5SXM2 1469 aa35.46■■■■□ 3.27
PICALM-202ENST00000393346 DIEXFQ68CQ4 756 aaKnown RBP35.4■■■■□ 3.26
PICALM-202ENST00000393346 P3H3Q8IVL6 736 aa35.36■■■■□ 3.25
PICALM-202ENST00000393346 APLP2Q06481 763 aa35.35■■■■□ 3.25
PICALM-202ENST00000393346 MAGI1Q96QZ7 1491 aaPredicted RBP35.32■■■■□ 3.25
PICALM-202ENST00000393346 EFCAB5A4FU69 1503 aa35.27■■■■□ 3.24
PICALM-202ENST00000393346 GRIN2AQ12879 1464 aa35.25■■■■□ 3.23
PICALM-202ENST00000393346 CHMP7Q8WUX9 453 aaPredicted RBP35.24■■■■□ 3.23
PICALM-202ENST00000393346 FBLN2P98095 1184 aa35.24■■■■□ 3.23
PICALM-202ENST00000393346 ACIN1Q9UKV3 1341 aaKnown RBP35.23■■■■□ 3.23
PICALM-202ENST00000393346 FHOD3Q2V2M9 1422 aa35.23■■■■□ 3.23
PICALM-202ENST00000393346 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
PICALM-202ENST00000393346 IQGAP2Q13576 1575 aa35.2■■■■□ 3.23
PICALM-202ENST00000393346 ZNF316A6NFI3 1004 aaPredicted RBP35.15■■■■□ 3.22
PICALM-202ENST00000393346 SAMD9Q5K651 1589 aa35.15■■■■□ 3.22
PICALM-202ENST00000393346 HNRNPUL2Q1KMD3 747 aaKnown RBP35.14■■■■□ 3.22
PICALM-202ENST00000393346 PELP1Q8IZL8 1130 aaKnown RBP35.13■■■■□ 3.21
PICALM-202ENST00000393346 NEUROD1Q13562 356 aa35.1■■■■□ 3.21
PICALM-202ENST00000393346 KIAA0586Q9BVV6 1533 aa35.07■■■■□ 3.21
PICALM-202ENST00000393346 CENPBP07199 599 aaPredicted RBP35.04■■■■□ 3.2
PICALM-202ENST00000393346 PCF11O94913 1555 aaKnown RBP35.04■■■■□ 3.2
PICALM-202ENST00000393346 CEP170Q5SW79 1584 aa35.04■■■■□ 3.2
PICALM-202ENST00000393346 KANK4Q5T7N3 995 aaPredicted RBP35.03■■■■□ 3.2
PICALM-202ENST00000393346 ATP1B4Q9UN42 357 aaPredicted RBP35.03■■■■□ 3.2
PICALM-202ENST00000393346 FMN1Q68DA7 1419 aa35.01■■■■□ 3.19
PICALM-202ENST00000393346 UGGT2Q9NYU1 1516 aa34.96■■■■□ 3.19
PICALM-202ENST00000393346 NUP160Q12769 1436 aa34.94■■■■□ 3.18
PICALM-202ENST00000393346 FYCO1Q9BQS8 1478 aa34.92■■■■□ 3.18
PICALM-202ENST00000393346 CASKIN1Q8WXD9 1431 aa34.92■■■■□ 3.18
PICALM-202ENST00000393346 TIAM1Q13009 1591 aa34.92■■■■□ 3.18
PICALM-202ENST00000393346 CHD1O14646 1710 aa34.9■■■■□ 3.18
PICALM-202ENST00000393346 MAP3K1Q13233 1512 aa34.86■■■■□ 3.17
PICALM-202ENST00000393346 DISP1Q96F81 1524 aa34.84■■■■□ 3.17
PICALM-202ENST00000393346 KIAA0556O60303 1618 aa34.83■■■■□ 3.17
PICALM-202ENST00000393346 CFAP43Q8NDM7 1665 aa34.82■■■■□ 3.16
PICALM-202ENST00000393346 JPH4Q96JJ6 628 aa34.8■■■■□ 3.16
PICALM-202ENST00000393346 LRRC9Q6ZRR7 1453 aa34.77■■■■□ 3.16
PICALM-202ENST00000393346 GTF3C3Q9Y5Q9 886 aa34.76■■■■□ 3.16
PICALM-202ENST00000393346 LRRIQ1Q96JM4 1722 aa34.76■■■■□ 3.15
PICALM-202ENST00000393346 CLSPNQ9HAW4 1339 aa34.72■■■■□ 3.15
PICALM-202ENST00000393346 CARMIL2Q6F5E8 1435 aa34.66■■■■□ 3.14
PICALM-202ENST00000393346 HECW1Q76N89 1606 aa34.62■■■■□ 3.13
PICALM-202ENST00000393346 RRBP1Q9P2E9 1410 aaKnown RBP34.62■■■■□ 3.13
PICALM-202ENST00000393346 DHX57Q6P158 1386 aaKnown RBP34.6■■■■□ 3.13
PICALM-202ENST00000393346 MIER1Q8N108 512 aa34.59■■■■□ 3.13
PICALM-202ENST00000393346 ARID3CA6NKF2 412 aa34.56■■■■□ 3.12
PICALM-202ENST00000393346 MTUS2Q5JR59 1369 aa34.55■■■■□ 3.12
PICALM-202ENST00000393346 CCDC18Q5T9S5 1454 aa34.54■■■■□ 3.12
PICALM-202ENST00000393346 PRG4Q92954 1404 aaPredicted RBP34.53■■■■□ 3.12
PICALM-202ENST00000393346 EPRSP07814 1512 aaKnown RBP34.52■■■■□ 3.12
PICALM-202ENST00000393346 RAPGEF6Q8TEU7 1601 aa34.51■■■■□ 3.12
PICALM-202ENST00000393346 PHLDB1Q86UU1 1377 aa34.49■■■■□ 3.11
PICALM-202ENST00000393346 CDK13Q14004 1512 aaKnown RBP34.48■■■■□ 3.11
PICALM-202ENST00000393346 PLB1Q6P1J6 1458 aa34.46■■■■□ 3.11
PICALM-202ENST00000393346 CCNB3Q8WWL7 1395 aa34.46■■■■□ 3.11
PICALM-202ENST00000393346 SHROOM2Q13796 1616 aa34.44■■■■□ 3.1
PICALM-202ENST00000393346 YTHDC1Q96MU7 727 aaKnown RBP34.44■■■■□ 3.1
PICALM-202ENST00000393346 NUP153P49790 1475 aaKnown RBP34.44■■■■□ 3.1
PICALM-202ENST00000393346 MAGI3Q5TCQ9 1506 aa34.41■■■■□ 3.1
PICALM-202ENST00000393346 EHBP1L1Q8N3D4 1523 aa34.4■■■■□ 3.1
PICALM-202ENST00000393346 CLASP1Q7Z460 1538 aa34.37■■■■□ 3.09
PICALM-202ENST00000393346 SUPT6HQ7KZ85 1726 aaKnown RBP34.37■■■■□ 3.09
PICALM-202ENST00000393346 PTPRGP23470 1445 aa34.33■■■■□ 3.09
PICALM-202ENST00000393346 NCOA2Q15596 1464 aa34.32■■■■□ 3.09
PICALM-202ENST00000393346 ERCC6L2Q5T890 1561 aa34.31■■■■□ 3.08
PICALM-202ENST00000393346 ITGAEP38570 1179 aa34.3■■■■□ 3.08
PICALM-202ENST00000393346 ABCA8O94911 1581 aa34.28■■■■□ 3.08
PICALM-202ENST00000393346 FAM50AQ14320 339 aaKnown RBP34.28■■■■□ 3.08
PICALM-202ENST00000393346 CDK11AQ9UQ88 783 aaPredicted RBP34.24■■■■□ 3.07
PICALM-202ENST00000393346 FGD6Q6ZV73 1430 aa34.2■■■■□ 3.07
PICALM-202ENST00000393346 ARHGEF11O15085 1522 aa34.19■■■■□ 3.06
PICALM-202ENST00000393346 MYOM3Q5VTT5 1437 aa34.18■■■■□ 3.06
PICALM-202ENST00000393346 ATP10BO94823 1461 aa34.12■■■■□ 3.05
PICALM-202ENST00000393346 OSCARQ8IYS5 282 aa34.12■■■■□ 3.05
PICALM-202ENST00000393346 UACAQ9BZF9 1416 aa34.11■■■■□ 3.05
PICALM-202ENST00000393346 RAB3GAP2Q9H2M9 1393 aa34.1■■■■□ 3.05
PICALM-202ENST00000393346 TROQ12816 1431 aaPredicted RBP34.08■■■■□ 3.05
PICALM-202ENST00000393346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.07■■■■□ 3.052e-22■□□□□ 9.6
PICALM-202ENST00000393346 PLEKHD1A6NEE1 506 aa34.04■■■■□ 3.04
PICALM-202ENST00000393346 PTPN23Q9H3S7 1636 aa34.03■■■■□ 3.04
PICALM-202ENST00000393346 MAPKBP1O60336 1514 aa34.01■■■■□ 3.04
PICALM-202ENST00000393346 SETD5Q9C0A6 1442 aa34■■■■□ 3.03
PICALM-202ENST00000393346 KIF14Q15058 1648 aa33.99■■■■□ 3.03
PICALM-202ENST00000393346 ABCC2Q92887 1545 aa33.98■■■■□ 3.03
PICALM-202ENST00000393346 ADCY10Q96PN6 1610 aa33.95■■■■□ 3.03
PICALM-202ENST00000393346 MIA2Q96PC5 1412 aa33.94■■■■□ 3.02
PICALM-202ENST00000393346 TCOF1Q13428 1488 aaKnown RBP33.89■■■■□ 3.02
PICALM-202ENST00000393346 PTPRKQ15262 1439 aa33.85■■■■□ 3.01
PICALM-202ENST00000393346 ITSN2Q9NZM3 1697 aa33.84■■■■□ 3.01
PICALM-202ENST00000393346 UHRF1BP1LA0JNW5 1464 aa33.82■■■■□ 3
PICALM-202ENST00000393346 GPATCH8Q9UKJ3 1502 aaKnown RBP33.82■■■■□ 3
PICALM-202ENST00000393346 CFDP1Q9UEE9 299 aaPredicted RBP33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms