RNA–Protein interactions for RNA: ENST00000393218.6

LGMN-202, Transcript of legumain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGMN, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-202ENST00000393218 TIAM1Q13009 1591 aa25.51■■□□□ 1.68
LGMN-202ENST00000393218 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
LGMN-202ENST00000393218 CTTNBP2Q8WZ74 1663 aa25.49■■□□□ 1.67
LGMN-202ENST00000393218 EFCAB5A4FU69 1503 aa25.48■■□□□ 1.67
LGMN-202ENST00000393218 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
LGMN-202ENST00000393218 CCNB3Q8WWL7 1395 aa25.45■■□□□ 1.66
LGMN-202ENST00000393218 LRRC9Q6ZRR7 1453 aa25.43■■□□□ 1.66
LGMN-202ENST00000393218 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
LGMN-202ENST00000393218 PCF11O94913 1555 aaKnown RBP25.42■■□□□ 1.66
LGMN-202ENST00000393218 AQRO60306 1485 aaKnown RBP eCLIP25.37■■□□□ 1.65
LGMN-202ENST00000393218 CASKIN1Q8WXD9 1431 aa25.37■■□□□ 1.65
LGMN-202ENST00000393218 ATP1B4Q9UN42 357 aaPredicted RBP25.37■■□□□ 1.65
LGMN-202ENST00000393218 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
LGMN-202ENST00000393218 CFAP43Q8NDM7 1665 aa25.35■■□□□ 1.65
LGMN-202ENST00000393218 FMN1Q68DA7 1419 aa25.32■■□□□ 1.64
LGMN-202ENST00000393218 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
LGMN-202ENST00000393218 SAMD9Q5K651 1589 aa25.3■■□□□ 1.64
LGMN-202ENST00000393218 DHX57Q6P158 1386 aaKnown RBP25.3■■□□□ 1.64
LGMN-202ENST00000393218 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
LGMN-202ENST00000393218 CLSPNQ9HAW4 1339 aa25.28■■□□□ 1.64
LGMN-202ENST00000393218 ITGAEP38570 1179 aa25.27■■□□□ 1.64
LGMN-202ENST00000393218 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
LGMN-202ENST00000393218 WDR62O43379 1518 aa25.24■■□□□ 1.63
LGMN-202ENST00000393218 ZNF316A6NFI3 1004 aaPredicted RBP25.24■■□□□ 1.63
LGMN-202ENST00000393218 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
LGMN-202ENST00000393218 DIEXFQ68CQ4 756 aaKnown RBP25.23■■□□□ 1.63
LGMN-202ENST00000393218 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
LGMN-202ENST00000393218 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
LGMN-202ENST00000393218 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
LGMN-202ENST00000393218 FAM50AQ14320 339 aaKnown RBP25.15■■□□□ 1.62
LGMN-202ENST00000393218 RAB3GAP2Q9H2M9 1393 aa25.11■■□□□ 1.61
LGMN-202ENST00000393218 IQGAP2Q13576 1575 aa25.11■■□□□ 1.61
LGMN-202ENST00000393218 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
LGMN-202ENST00000393218 LRRIQ1Q96JM4 1722 aa25.1■■□□□ 1.61
LGMN-202ENST00000393218 SETD5Q9C0A6 1442 aa25.09■■□□□ 1.61
LGMN-202ENST00000393218 MTUS2Q5JR59 1369 aa25.09■■□□□ 1.61
LGMN-202ENST00000393218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.09■■□□□ 1.61
LGMN-202ENST00000393218 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
LGMN-202ENST00000393218 FGD6Q6ZV73 1430 aa25.02■■□□□ 1.6
LGMN-202ENST00000393218 UGGT2Q9NYU1 1516 aa25■■□□□ 1.59
LGMN-202ENST00000393218 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
LGMN-202ENST00000393218 NCOA2Q15596 1464 aa24.97■■□□□ 1.59
LGMN-202ENST00000393218 KIAA0586Q9BVV6 1533 aa24.97■■□□□ 1.59
LGMN-202ENST00000393218 CCDC18Q5T9S5 1454 aa24.95■■□□□ 1.58
LGMN-202ENST00000393218 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
LGMN-202ENST00000393218 EHBP1L1Q8N3D4 1523 aa24.94■■□□□ 1.58
LGMN-202ENST00000393218 MAPKBP1O60336 1514 aa24.93■■□□□ 1.58
LGMN-202ENST00000393218 SUPT6HQ7KZ85 1726 aaKnown RBP24.92■■□□□ 1.58
LGMN-202ENST00000393218 HECW1Q76N89 1606 aa24.92■■□□□ 1.58
LGMN-202ENST00000393218 MAGI3Q5TCQ9 1506 aa24.92■■□□□ 1.58
LGMN-202ENST00000393218 MYOM3Q5VTT5 1437 aa24.92■■□□□ 1.58
LGMN-202ENST00000393218 EPRSP07814 1512 aaKnown RBP24.9■■□□□ 1.58
LGMN-202ENST00000393218 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.57
LGMN-202ENST00000393218 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
LGMN-202ENST00000393218 DISP1Q96F81 1524 aa24.88■■□□□ 1.57
LGMN-202ENST00000393218 PTPRKQ15262 1439 aa24.86■■□□□ 1.57
LGMN-202ENST00000393218 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
LGMN-202ENST00000393218 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
LGMN-202ENST00000393218 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
LGMN-202ENST00000393218 CDK13Q14004 1512 aaKnown RBP24.82■■□□□ 1.56
LGMN-202ENST00000393218 PTPN23Q9H3S7 1636 aa24.79■■□□□ 1.56
LGMN-202ENST00000393218 ARID3CA6NKF2 412 aa24.78■■□□□ 1.56
LGMN-202ENST00000393218 CEP170Q5SW79 1584 aa24.77■■□□□ 1.56
LGMN-202ENST00000393218 HFM1A2PYH4 1435 aa24.77■■□□□ 1.56
LGMN-202ENST00000393218 FBLN2P98095 1184 aa24.76■■□□□ 1.55
LGMN-202ENST00000393218 MIER1Q8N108 512 aa24.76■■□□□ 1.55
LGMN-202ENST00000393218 SIN3AQ96ST3 1273 aa24.76■■□□□ 1.55
LGMN-202ENST00000393218 TCOF1Q13428 1488 aaKnown RBP24.74■■□□□ 1.55
LGMN-202ENST00000393218 NAIPQ13075 1403 aa24.72■■□□□ 1.55
LGMN-202ENST00000393218 NUP153P49790 1475 aaKnown RBP24.71■■□□□ 1.55
LGMN-202ENST00000393218 NUP160Q12769 1436 aa24.71■■□□□ 1.55
LGMN-202ENST00000393218 NEUROD1Q13562 356 aa24.7■■□□□ 1.54
LGMN-202ENST00000393218 RAPGEF6Q8TEU7 1601 aa24.7■■□□□ 1.54
LGMN-202ENST00000393218 MIA2Q96PC5 1412 aa24.69■■□□□ 1.54
LGMN-202ENST00000393218 JPH4Q96JJ6 628 aa24.69■■□□□ 1.54
LGMN-202ENST00000393218 TIMELESSQ9UNS1 1208 aa24.68■■□□□ 1.54
LGMN-202ENST00000393218 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
LGMN-202ENST00000393218 UACAQ9BZF9 1416 aa24.65■■□□□ 1.54
LGMN-202ENST00000393218 SCAF1Q9H7N4 1312 aaKnown RBP24.65■■□□□ 1.54
LGMN-202ENST00000393218 CDK11AQ9UQ88 783 aaPredicted RBP24.63■■□□□ 1.53
LGMN-202ENST00000393218 CARMIL2Q6F5E8 1435 aa24.62■■□□□ 1.53
LGMN-202ENST00000393218 CENPBP07199 599 aaPredicted RBP24.62■■□□□ 1.53
LGMN-202ENST00000393218 CHIC2Q9UKJ5 165 aa24.62■■□□□ 1.53
LGMN-202ENST00000393218 RRP7BPQ9NSQ0 103 aa24.61■■□□□ 1.53
LGMN-202ENST00000393218 PLB1Q6P1J6 1458 aa24.59■■□□□ 1.53
LGMN-202ENST00000393218 PPP1R15AO75807 674 aaPredicted RBP24.55■■□□□ 1.52
LGMN-202ENST00000393218 AKNAQ7Z591 1439 aa24.55■■□□□ 1.52
LGMN-202ENST00000393218 PRG4Q92954 1404 aaPredicted RBP24.53■■□□□ 1.52
LGMN-202ENST00000393218 TROQ12816 1431 aaPredicted RBP24.53■■□□□ 1.52
LGMN-202ENST00000393218 GCC2Q8IWJ2 1684 aa24.52■■□□□ 1.52
LGMN-202ENST00000393218 ZNF644Q9H582 1327 aaPredicted RBP24.5■■□□□ 1.51
LGMN-202ENST00000393218 DAPK1P53355 1430 aa24.47■■□□□ 1.51
LGMN-202ENST00000393218 YTHDC1Q96MU7 727 aaKnown RBP24.47■■□□□ 1.51
LGMN-202ENST00000393218 ABCC5O15440 1437 aa24.46■■□□□ 1.51
LGMN-202ENST00000393218 KDM6BO15054 1643 aa24.46■■□□□ 1.51
LGMN-202ENST00000393218 ROCK1Q13464 1354 aa24.45■■□□□ 1.5
LGMN-202ENST00000393218 ABCA8O94911 1581 aa24.44■■□□□ 1.5
LGMN-202ENST00000393218 TRIM52Q96A61 297 aa24.44■■□□□ 1.5
LGMN-202ENST00000393218 TONSLQ96HA7 1378 aa24.44■■□□□ 1.5
LGMN-202ENST00000393218 DNMT1P26358 1616 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms