RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 RRP7BPQ9NSQ0 103 aa17.42■□□□□ 0.38
LCA5-202ENST00000392959 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.37
LCA5-202ENST00000392959 GOLGA3Q08378 1498 aa17.38■□□□□ 0.37
LCA5-202ENST00000392959 SUPT16HQ9Y5B9 1047 aaKnown RBP17.36■□□□□ 0.37
LCA5-202ENST00000392959 DDRGK1Q96HY6 314 aa17.36■□□□□ 0.37
LCA5-202ENST00000392959 NPM1P06748 294 aaKnown RBP eCLIP17.35■□□□□ 0.37
LCA5-202ENST00000392959 BECN1Q14457 450 aa17.33■□□□□ 0.36
LCA5-202ENST00000392959 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
LCA5-202ENST00000392959 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
LCA5-202ENST00000392959 MYH16Q9H6N6 1097 aa17.3■□□□□ 0.36
LCA5-202ENST00000392959 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
LCA5-202ENST00000392959 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
LCA5-202ENST00000392959 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
LCA5-202ENST00000392959 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
LCA5-202ENST00000392959 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
LCA5-202ENST00000392959 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
LCA5-202ENST00000392959 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
LCA5-202ENST00000392959 TRIM44Q96DX7 344 aaPredicted RBP17.22■□□□□ 0.35
LCA5-202ENST00000392959 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
LCA5-202ENST00000392959 GOLGA6L22H0YM25 854 aa17.2■□□□□ 0.34
LCA5-202ENST00000392959 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
LCA5-202ENST00000392959 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
LCA5-202ENST00000392959 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
LCA5-202ENST00000392959 KNSTRNQ9Y448 316 aa17.19■□□□□ 0.34
LCA5-202ENST00000392959 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
LCA5-202ENST00000392959 CDCA8Q53HL2 280 aa17.18■□□□□ 0.34
LCA5-202ENST00000392959 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
LCA5-202ENST00000392959 NCLP19338 710 aaKnown RBP17.15■□□□□ 0.34
LCA5-202ENST00000392959 CFDP1Q9UEE9 299 aaPredicted RBP17.14■□□□□ 0.33
LCA5-202ENST00000392959 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
LCA5-202ENST00000392959 NOP58Q9Y2X3 529 aaKnown RBP17.13■□□□□ 0.33
LCA5-202ENST00000392959 ERICH6BQ5W0A0 696 aa17.13■□□□□ 0.33
LCA5-202ENST00000392959 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
LCA5-202ENST00000392959 B4GALNT3Q6L9W6 998 aa17.11■□□□□ 0.33
LCA5-202ENST00000392959 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
LCA5-202ENST00000392959 RGS3P49796 1198 aa17.1■□□□□ 0.33
LCA5-202ENST00000392959 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
LCA5-202ENST00000392959 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
LCA5-202ENST00000392959 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
LCA5-202ENST00000392959 CCNB3Q8WWL7 1395 aa17.07■□□□□ 0.32
LCA5-202ENST00000392959 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
LCA5-202ENST00000392959 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
LCA5-202ENST00000392959 PPP1R15AO75807 674 aaPredicted RBP17.04■□□□□ 0.32
LCA5-202ENST00000392959 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
LCA5-202ENST00000392959 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.31
LCA5-202ENST00000392959 RTN4Q9NQC3 1192 aaKnown RBP17.02■□□□□ 0.31
LCA5-202ENST00000392959 CASC1Q6TDU7 716 aa17■□□□□ 0.31
LCA5-202ENST00000392959 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
LCA5-202ENST00000392959 MAPK8IP3Q9UPT6 1336 aa17■□□□□ 0.31
LCA5-202ENST00000392959 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
LCA5-202ENST00000392959 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
LCA5-202ENST00000392959 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
LCA5-202ENST00000392959 C14orf37Q86TY3 774 aa16.97■□□□□ 0.31
LCA5-202ENST00000392959 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.31
LCA5-202ENST00000392959 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
LCA5-202ENST00000392959 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
LCA5-202ENST00000392959 ZBTB7CA1YPR0 619 aa16.95■□□□□ 0.3
LCA5-202ENST00000392959 NAP1L5Q96NT1 182 aaPredicted RBP16.95■□□□□ 0.3
LCA5-202ENST00000392959 MS4A1P11836 297 aa16.94■□□□□ 0.3
LCA5-202ENST00000392959 TNNT2P45379 298 aaPredicted RBP16.94■□□□□ 0.3
LCA5-202ENST00000392959 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
LCA5-202ENST00000392959 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
LCA5-202ENST00000392959 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
LCA5-202ENST00000392959 SOGA1O94964 1423 aa16.92■□□□□ 0.3
LCA5-202ENST00000392959 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
LCA5-202ENST00000392959 TMF1P82094 1093 aa16.91■□□□□ 0.3
LCA5-202ENST00000392959 CDK11BP21127 795 aaKnown RBP16.91■□□□□ 0.3
LCA5-202ENST00000392959 DEKP35659 375 aaKnown RBP16.91■□□□□ 0.3
LCA5-202ENST00000392959 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
LCA5-202ENST00000392959 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
LCA5-202ENST00000392959 SETD5Q9C0A6 1442 aa16.9■□□□□ 0.3
LCA5-202ENST00000392959 TPRNQ4KMQ1 711 aa16.89■□□□□ 0.3
LCA5-202ENST00000392959 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
LCA5-202ENST00000392959 A0A0G2JS52 829 aa16.88■□□□□ 0.29
LCA5-202ENST00000392959 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
LCA5-202ENST00000392959 POGKQ9P215 609 aa16.87■□□□□ 0.29
LCA5-202ENST00000392959 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
LCA5-202ENST00000392959 PLCB2Q00722 1185 aa16.85■□□□□ 0.29
LCA5-202ENST00000392959 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
LCA5-202ENST00000392959 NACADO15069 1562 aa16.84■□□□□ 0.29
LCA5-202ENST00000392959 HSCBQ8IWL3 235 aa16.84■□□□□ 0.29
LCA5-202ENST00000392959 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.29
LCA5-202ENST00000392959 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
LCA5-202ENST00000392959 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
LCA5-202ENST00000392959 L1TD1Q5T7N2 865 aaKnown RBP16.81■□□□□ 0.28
LCA5-202ENST00000392959 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
LCA5-202ENST00000392959 RCAN3Q9UKA8 241 aa16.78■□□□□ 0.28
LCA5-202ENST00000392959 CUX2O14529 1486 aa16.78■□□□□ 0.28
LCA5-202ENST00000392959 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.28
LCA5-202ENST00000392959 TCERG1O14776 1098 aaKnown RBP16.77■□□□□ 0.27
LCA5-202ENST00000392959 KTN1Q86UP2 1357 aaKnown RBP16.76■□□□□ 0.27
LCA5-202ENST00000392959 PKD2Q13563 968 aa16.76■□□□□ 0.27
LCA5-202ENST00000392959 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
LCA5-202ENST00000392959 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
LCA5-202ENST00000392959 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
LCA5-202ENST00000392959 KCNJ4P48050 445 aa16.75■□□□□ 0.27
LCA5-202ENST00000392959 FGD1P98174 961 aa16.75■□□□□ 0.27
LCA5-202ENST00000392959 FOXD1Q16676 465 aa16.74■□□□□ 0.27
LCA5-202ENST00000392959 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
LCA5-202ENST00000392959 RALBP1Q15311 655 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms