RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 ABCB7O75027 752 aa7.37□□□□□ -1.23
GTDC1-205ENST00000392871 SMARCA4P51532 1647 aa7.36□□□□□ -1.23
GTDC1-205ENST00000392871 PLCD3Q8N3E9 789 aa7.35□□□□□ -1.23
GTDC1-205ENST00000392871 DNAJC5Q9H3Z4 198 aa7.34□□□□□ -1.23
GTDC1-205ENST00000392871 NBR1Q14596 966 aa7.31□□□□□ -1.24
GTDC1-205ENST00000392871 MIER1Q8N108 512 aa7.31□□□□□ -1.24
GTDC1-205ENST00000392871 ZNF692Q9BU19 519 aaPredicted RBP7.31□□□□□ -1.24
GTDC1-205ENST00000392871 CIZ1Q9ULV3 898 aaPredicted RBP7.31□□□□□ -1.24
GTDC1-205ENST00000392871 GTF3C3Q9Y5Q9 886 aa7.31□□□□□ -1.24
GTDC1-205ENST00000392871 EIF4G1Q04637 1599 aaKnown RBP7.3□□□□□ -1.24
GTDC1-205ENST00000392871 STAG3Q9UJ98 1225 aa7.3□□□□□ -1.24
GTDC1-205ENST00000392871 PCGF6Q9BYE7 350 aa7.29□□□□□ -1.24
GTDC1-205ENST00000392871 ATAD2BQ9ULI0 1458 aa7.28□□□□□ -1.24
GTDC1-205ENST00000392871 FAM9AQ8IZU1 332 aaPredicted RBP7.28□□□□□ -1.24
GTDC1-205ENST00000392871 RNF39Q9H2S5 420 aa7.28□□□□□ -1.24
GTDC1-205ENST00000392871 PEG3Q9GZU2 1588 aa7.27□□□□□ -1.24
GTDC1-205ENST00000392871 CACNB1Q02641 598 aaPredicted RBP7.27□□□□□ -1.24
GTDC1-205ENST00000392871 TRIM41Q8WV44 630 aa7.27□□□□□ -1.24
GTDC1-205ENST00000392871 OSCARQ8IYS5 282 aa7.27□□□□□ -1.25
GTDC1-205ENST00000392871 RNF25Q96BH1 459 aaPredicted RBP7.27□□□□□ -1.25
GTDC1-205ENST00000392871 ZBTB12Q9Y330 459 aaPredicted RBP7.26□□□□□ -1.25
GTDC1-205ENST00000392871 SSUH2Q9Y2M2 353 aa7.26□□□□□ -1.25
GTDC1-205ENST00000392871 NKX1-1Q15270 411 aaPredicted RBP7.25□□□□□ -1.25
GTDC1-205ENST00000392871 TOP2AP11388 1531 aaKnown RBP7.25□□□□□ -1.25
GTDC1-205ENST00000392871 SMARCA2P51531 1590 aa7.24□□□□□ -1.25
GTDC1-205ENST00000392871 HS6ST3Q8IZP7 471 aa7.24□□□□□ -1.25
GTDC1-205ENST00000392871 NCAPD3P42695 1498 aa7.23□□□□□ -1.25
GTDC1-205ENST00000392871 BAZ1BQ9UIG0 1483 aaKnown RBP7.23□□□□□ -1.25
GTDC1-205ENST00000392871 HRCP23327 699 aa7.22□□□□□ -1.25
GTDC1-205ENST00000392871 CCDC88BA6NC98 1476 aa7.2□□□□□ -1.26
GTDC1-205ENST00000392871 DAXXQ9UER7 740 aaPredicted RBP7.2□□□□□ -1.26
GTDC1-205ENST00000392871 ABCC8Q09428 1581 aa7.2□□□□□ -1.26
GTDC1-205ENST00000392871 CC2D2AQ9P2K1 1620 aa7.19□□□□□ -1.26
GTDC1-205ENST00000392871 SPDYE2BA6NHP3 402 aa7.19□□□□□ -1.26
GTDC1-205ENST00000392871 SPDYE6P0CI01 402 aa7.19□□□□□ -1.26
GTDC1-205ENST00000392871 SPDYE2Q495Y8 402 aa7.19□□□□□ -1.26
GTDC1-205ENST00000392871 GTPBP6O43824 516 aaPredicted RBP7.19□□□□□ -1.26
GTDC1-205ENST00000392871 TMEM132AQ24JP5 1023 aa7.18□□□□□ -1.26
GTDC1-205ENST00000392871 ARXQ96QS3 562 aa7.18□□□□□ -1.26
GTDC1-205ENST00000392871 HMGXB3Q12766 1538 aa7.18□□□□□ -1.26
GTDC1-205ENST00000392871 PPARGC1BQ86YN6 1023 aaKnown RBP7.17□□□□□ -1.26
GTDC1-205ENST00000392871 DSG3P32926 999 aa7.15□□□□□ -1.26
GTDC1-205ENST00000392871 C1QBPQ07021 282 aaKnown RBP7.15□□□□□ -1.26
GTDC1-205ENST00000392871 ZBTB47Q9UFB7 747 aaPredicted RBP7.12□□□□□ -1.27
GTDC1-205ENST00000392871 TRIM26Q12899 539 aaPredicted RBP7.11□□□□□ -1.27
GTDC1-205ENST00000392871 NUBP1P53384 320 aa7.1□□□□□ -1.27
GTDC1-205ENST00000392871 PLEKHG5O94827 1062 aa7.1□□□□□ -1.27
GTDC1-205ENST00000392871 RIOK3O14730 519 aaKnown RBP7.09□□□□□ -1.27
GTDC1-205ENST00000392871 C14orf37Q86TY3 774 aa7.09□□□□□ -1.27
GTDC1-205ENST00000392871 STK25O00506 426 aa7.09□□□□□ -1.28
GTDC1-205ENST00000392871 SOGA1O94964 1423 aa7.08□□□□□ -1.28
GTDC1-205ENST00000392871 RUSC2Q8N2Y8 1516 aa7.07□□□□□ -1.28
GTDC1-205ENST00000392871 GSE1Q14687 1217 aa7.06□□□□□ -1.28
GTDC1-205ENST00000392871 DCAF8Q5TAQ9 597 aa7.05□□□□□ -1.28
GTDC1-205ENST00000392871 CFTRP13569 1480 aa7.05□□□□□ -1.28
GTDC1-205ENST00000392871 SYNJ1O43426 1573 aa7.04□□□□□ -1.28
GTDC1-205ENST00000392871 CADPSQ9ULU8 1353 aa7.04□□□□□ -1.28
GTDC1-205ENST00000392871 HOMEZQ8IX15 550 aa7.04□□□□□ -1.28
GTDC1-205ENST00000392871 BCL11BQ9C0K0 894 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-205ENST00000392871 WRNQ14191 1432 aaPredicted RBP eCLIP7.02□□□□□ -1.29
GTDC1-205ENST00000392871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-205ENST00000392871 ZFP91Q96JP5 570 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-205ENST00000392871 TTBK1Q5TCY1 1321 aaPredicted RBP7.02□□□□□ -1.29
GTDC1-205ENST00000392871 VGFO15240 615 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-205ENST00000392871 BRPF1P55201 1214 aaPredicted RBP7.01□□□□□ -1.29
GTDC1-205ENST00000392871 STK24Q9Y6E0 443 aa7.01□□□□□ -1.29
GTDC1-205ENST00000392871 CEP162Q5TB80 1403 aa7.01□□□□□ -1.29
GTDC1-205ENST00000392871 KCNV2Q8TDN2 545 aa7.01□□□□□ -1.29
GTDC1-205ENST00000392871 LMOD2Q6P5Q4 547 aa7□□□□□ -1.29
GTDC1-205ENST00000392871 CADPS2Q86UW7 1296 aa7□□□□□ -1.29
GTDC1-205ENST00000392871 NESP48681 1621 aa7□□□□□ -1.29
GTDC1-205ENST00000392871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7□□□□□ -1.29
GTDC1-205ENST00000392871 ERICH6Q7L0X2 663 aa6.98□□□□□ -1.29
GTDC1-205ENST00000392871 MNX1P50219 401 aaPredicted RBP6.98□□□□□ -1.29
GTDC1-205ENST00000392871 RASEFQ8IZ41 740 aa6.97□□□□□ -1.29
GTDC1-205ENST00000392871 FANCD2Q9BXW9 1451 aa6.96□□□□□ -1.3
GTDC1-205ENST00000392871 LAMC3Q9Y6N6 1575 aa6.95□□□□□ -1.3
GTDC1-205ENST00000392871 GOLGA3Q08378 1498 aa6.95□□□□□ -1.3
GTDC1-205ENST00000392871 TNIKQ9UKE5 1360 aa6.95□□□□□ -1.3
GTDC1-205ENST00000392871 PYGBP11216 843 aa6.95□□□□□ -1.3
GTDC1-205ENST00000392871 UBTFP17480 764 aaKnown RBP6.95□□□□□ -1.3
GTDC1-205ENST00000392871 FAM212AQ96EL1 285 aa6.95□□□□□ -1.3
GTDC1-205ENST00000392871 CREBZFQ9NS37 354 aa6.95□□□□□ -1.3
GTDC1-205ENST00000392871 EEA1Q15075 1411 aa6.95□□□□□ -1.3
GTDC1-205ENST00000392871 P3H3Q8IVL6 736 aa6.94□□□□□ -1.3
GTDC1-205ENST00000392871 SGIP1Q9BQI5 828 aa6.94□□□□□ -1.3
GTDC1-205ENST00000392871 CHRM1P11229 460 aaPredicted RBP6.94□□□□□ -1.3
GTDC1-205ENST00000392871 CUX1P39880 1505 aa6.93□□□□□ -1.3
GTDC1-205ENST00000392871 PDS5BQ9NTI5 1447 aa6.93□□□□□ -1.3
GTDC1-205ENST00000392871 KIF21BO75037 1637 aa6.92□□□□□ -1.3
GTDC1-205ENST00000392871 TOP2BQ02880 1626 aa6.92□□□□□ -1.3
GTDC1-205ENST00000392871 RAPGEF2Q9Y4G8 1499 aa6.91□□□□□ -1.3
GTDC1-205ENST00000392871 PRDM2Q13029 1718 aa6.91□□□□□ -1.3
GTDC1-205ENST00000392871 CEP164Q9UPV0 1460 aa6.91□□□□□ -1.3
GTDC1-205ENST00000392871 BIVM-ERCC5R4GMW8 1640 aa6.9□□□□□ -1.3
GTDC1-205ENST00000392871 RANGAP1P46060 587 aaPredicted RBP6.9□□□□□ -1.31
GTDC1-205ENST00000392871 NEUROD2Q15784 382 aa6.89□□□□□ -1.31
GTDC1-205ENST00000392871 SLC24A3Q9HC58 644 aa6.89□□□□□ -1.31
GTDC1-205ENST00000392871 ZC3H15Q8WU90 426 aaKnown RBP6.89□□□□□ -1.31
GTDC1-205ENST00000392871 RYDENQ9NUL5 291 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms