RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 FAM9AQ8IZU1 332 aaPredicted RBP26.81■■□□□ 1.88
CSHL1-204ENST00000392824 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
CSHL1-204ENST00000392824 CYB5RLQ6IPT4 315 aa26.8■■□□□ 1.88
CSHL1-204ENST00000392824 KIAA0586Q9BVV6 1533 aa26.76■■□□□ 1.87
CSHL1-204ENST00000392824 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
CSHL1-204ENST00000392824 PRG4Q92954 1404 aaPredicted RBP26.7■■□□□ 1.86
CSHL1-204ENST00000392824 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
CSHL1-204ENST00000392824 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
CSHL1-204ENST00000392824 ERCC6L2Q5T890 1561 aa26.59■■□□□ 1.85
CSHL1-204ENST00000392824 IQGAP2Q13576 1575 aa26.56■■□□□ 1.84
CSHL1-204ENST00000392824 CARMIL2Q6F5E8 1435 aa26.53■■□□□ 1.84
CSHL1-204ENST00000392824 EHMT2Q96KQ7 1210 aa26.47■■□□□ 1.83
CSHL1-204ENST00000392824 TTBK1Q5TCY1 1321 aaPredicted RBP26.46■■□□□ 1.83
CSHL1-204ENST00000392824 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
CSHL1-204ENST00000392824 UGGT2Q9NYU1 1516 aa26.43■■□□□ 1.82
CSHL1-204ENST00000392824 TNIKQ9UKE5 1360 aa26.43■■□□□ 1.82
CSHL1-204ENST00000392824 PTPRGP23470 1445 aa26.42■■□□□ 1.82
CSHL1-204ENST00000392824 KIF21BO75037 1637 aa26.42■■□□□ 1.82
CSHL1-204ENST00000392824 CTTNBP2Q8WZ74 1663 aa26.4■■□□□ 1.82
CSHL1-204ENST00000392824 DISP1Q96F81 1524 aa26.39■■□□□ 1.81
CSHL1-204ENST00000392824 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
CSHL1-204ENST00000392824 RANGAP1P46060 587 aaPredicted RBP26.36■■□□□ 1.81
CSHL1-204ENST00000392824 NPM1P06748 294 aaKnown RBP eCLIP26.33■■□□□ 1.81
CSHL1-204ENST00000392824 P3H3Q8IVL6 736 aa26.3■■□□□ 1.8
CSHL1-204ENST00000392824 KIAA0556O60303 1618 aa26.28■■□□□ 1.8
CSHL1-204ENST00000392824 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
CSHL1-204ENST00000392824 UACAQ9BZF9 1416 aa26.21■■□□□ 1.79
CSHL1-204ENST00000392824 ADCY10Q96PN6 1610 aa26.14■■□□□ 1.78
CSHL1-204ENST00000392824 UHRF1BP1LA0JNW5 1464 aa26.13■■□□□ 1.77
CSHL1-204ENST00000392824 SAMD9Q5K651 1589 aa26.12■■□□□ 1.77
CSHL1-204ENST00000392824 ABCC2Q92887 1545 aa26.09■■□□□ 1.77
CSHL1-204ENST00000392824 PLB1Q6P1J6 1458 aa26.09■■□□□ 1.77
CSHL1-204ENST00000392824 FHOD3Q2V2M9 1422 aa26.08■■□□□ 1.77
CSHL1-204ENST00000392824 EFCAB5A4FU69 1503 aa26.08■■□□□ 1.77
CSHL1-204ENST00000392824 ABCA8O94911 1581 aa26■■□□□ 1.75
CSHL1-204ENST00000392824 MAPKBP1O60336 1514 aa26■■□□□ 1.75
CSHL1-204ENST00000392824 KDM5BQ9UGL1 1544 aa26■■□□□ 1.75
CSHL1-204ENST00000392824 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
CSHL1-204ENST00000392824 FAM69CQ0P6D2 419 aa25.98■■□□□ 1.75
CSHL1-204ENST00000392824 ARHGAP35Q9NRY4 1499 aa25.98■■□□□ 1.75
CSHL1-204ENST00000392824 ARID3CA6NKF2 412 aa25.97■■□□□ 1.75
CSHL1-204ENST00000392824 ASXL2Q76L83 1435 aa25.95■■□□□ 1.74
CSHL1-204ENST00000392824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.94■■□□□ 1.74
CSHL1-204ENST00000392824 HNRNPUL2Q1KMD3 747 aaKnown RBP25.94■■□□□ 1.74
CSHL1-204ENST00000392824 ABCC10Q5T3U5 1492 aa25.92■■□□□ 1.74
CSHL1-204ENST00000392824 CLIP1P30622 1438 aa25.92■■□□□ 1.74
CSHL1-204ENST00000392824 FMN1Q68DA7 1419 aa25.92■■□□□ 1.74
CSHL1-204ENST00000392824 ATP1B4Q9UN42 357 aaPredicted RBP25.91■■□□□ 1.74
CSHL1-204ENST00000392824 RAPGEF6Q8TEU7 1601 aa25.88■■□□□ 1.73
CSHL1-204ENST00000392824 ZCCHC11Q5TAX3 1644 aaKnown RBP25.88■■□□□ 1.73
CSHL1-204ENST00000392824 ATP10BO94823 1461 aa25.86■■□□□ 1.73
CSHL1-204ENST00000392824 KCNH8Q96L42 1107 aa25.84■■□□□ 1.73
CSHL1-204ENST00000392824 NUP153P49790 1475 aaKnown RBP25.83■■□□□ 1.73
CSHL1-204ENST00000392824 WDR7Q9Y4E6 1490 aa25.81■■□□□ 1.72
CSHL1-204ENST00000392824 DIP2BQ9P265 1576 aa25.8■■□□□ 1.72
CSHL1-204ENST00000392824 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
CSHL1-204ENST00000392824 PLEKHD1A6NEE1 506 aa25.78■■□□□ 1.72
CSHL1-204ENST00000392824 EPRSP07814 1512 aaKnown RBP25.77■■□□□ 1.72
CSHL1-204ENST00000392824 KIF13AQ9H1H9 1805 aa25.74■■□□□ 1.71
CSHL1-204ENST00000392824 CDK11AQ9UQ88 783 aaPredicted RBP25.72■■□□□ 1.71
CSHL1-204ENST00000392824 GLI2P10070 1586 aa25.71■■□□□ 1.71
CSHL1-204ENST00000392824 CASKIN1Q8WXD9 1431 aa25.7■■□□□ 1.7
CSHL1-204ENST00000392824 HECW1Q76N89 1606 aa25.69■■□□□ 1.7
CSHL1-204ENST00000392824 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
CSHL1-204ENST00000392824 CD109Q6YHK3 1445 aa25.63■■□□□ 1.69
CSHL1-204ENST00000392824 FYCO1Q9BQS8 1478 aa25.61■■□□□ 1.69
CSHL1-204ENST00000392824 PCF11O94913 1555 aaKnown RBP25.59■■□□□ 1.69
CSHL1-204ENST00000392824 CCDC18Q5T9S5 1454 aa25.58■■□□□ 1.69
CSHL1-204ENST00000392824 TSPOAP1O95153 1857 aa25.57■■□□□ 1.68
CSHL1-204ENST00000392824 TEX14Q8IWB6 1497 aa25.55■■□□□ 1.68
CSHL1-204ENST00000392824 MAP3K4Q9Y6R4 1608 aa25.54■■□□□ 1.68
CSHL1-204ENST00000392824 TROQ12816 1431 aaPredicted RBP25.5■■□□□ 1.67
CSHL1-204ENST00000392824 MAGI3Q5TCQ9 1506 aa25.5■■□□□ 1.67
CSHL1-204ENST00000392824 CFAP43Q8NDM7 1665 aa25.5■■□□□ 1.67
CSHL1-204ENST00000392824 VPS8Q8N3P4 1428 aa25.48■■□□□ 1.67
CSHL1-204ENST00000392824 ABCA9Q8IUA7 1624 aa25.47■■□□□ 1.67
CSHL1-204ENST00000392824 PPRC1Q5VV67 1664 aaKnown RBP25.44■■□□□ 1.66
CSHL1-204ENST00000392824 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
CSHL1-204ENST00000392824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.42■■□□□ 1.66
CSHL1-204ENST00000392824 KDM6BO15054 1643 aa25.4■■□□□ 1.66
CSHL1-204ENST00000392824 MTUS2Q5JR59 1369 aa25.4■■□□□ 1.66
CSHL1-204ENST00000392824 PHLDB1Q86UU1 1377 aa25.4■■□□□ 1.66
CSHL1-204ENST00000392824 APLP2Q06481 763 aa25.37■■□□□ 1.65
CSHL1-204ENST00000392824 KIF14Q15058 1648 aa25.37■■□□□ 1.65
CSHL1-204ENST00000392824 EFCAB2Q5VUJ9 269 aa25.35■■□□□ 1.65
CSHL1-204ENST00000392824 PLCH2O75038 1416 aa25.35■■□□□ 1.65
CSHL1-204ENST00000392824 TTC37Q6PGP7 1564 aa25.35■■□□□ 1.65
CSHL1-204ENST00000392824 NEO1Q92859 1461 aa25.34■■□□□ 1.65
CSHL1-204ENST00000392824 COL17A1Q9UMD9 1497 aaPredicted RBP25.33■■□□□ 1.65
CSHL1-204ENST00000392824 FANCAO15360 1455 aa25.31■■□□□ 1.64
CSHL1-204ENST00000392824 AKNAQ7Z591 1439 aa25.29■■□□□ 1.64
CSHL1-204ENST00000392824 ARAP3Q8WWN8 1544 aa25.27■■□□□ 1.64
CSHL1-204ENST00000392824 RAPGEF3O95398 923 aa25.25■■□□□ 1.63
CSHL1-204ENST00000392824 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
CSHL1-204ENST00000392824 CCNB3Q8WWL7 1395 aa25.24■■□□□ 1.63
CSHL1-204ENST00000392824 EHBP1L1Q8N3D4 1523 aa25.23■■□□□ 1.63
CSHL1-204ENST00000392824 ARHGAP5Q13017 1502 aa25.22■■□□□ 1.63
CSHL1-204ENST00000392824 MAP3K1Q13233 1512 aa25.22■■□□□ 1.63
CSHL1-204ENST00000392824 KANK4Q5T7N3 995 aaPredicted RBP25.21■■□□□ 1.63
CSHL1-204ENST00000392824 CFAP74Q9C0B2 1584 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms