RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 NEUROD1Q13562 356 aa27.81■■■□□ 2.04
TRAF3-203ENST00000392745 APLP2Q06481 763 aa27.8■■■□□ 2.04
TRAF3-203ENST00000392745 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.044e-6■■■■■ 31
TRAF3-203ENST00000392745 IFT140Q96RY7 1462 aa27.73■■■□□ 2.03
TRAF3-203ENST00000392745 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
TRAF3-203ENST00000392745 THOC2Q8NI27 1593 aaKnown RBP27.72■■■□□ 2.03
TRAF3-203ENST00000392745 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
TRAF3-203ENST00000392745 ZNF608Q9ULD9 1512 aaPredicted RBP27.71■■■□□ 2.03
TRAF3-203ENST00000392745 DIEXFQ68CQ4 756 aaKnown RBP27.67■■■□□ 2.02
TRAF3-203ENST00000392745 P3H3Q8IVL6 736 aa27.65■■■□□ 2.02
TRAF3-203ENST00000392745 KANK4Q5T7N3 995 aaPredicted RBP27.63■■■□□ 2.01
TRAF3-203ENST00000392745 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
TRAF3-203ENST00000392745 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
TRAF3-203ENST00000392745 GTF3C3Q9Y5Q9 886 aa27.59■■■□□ 2.01
TRAF3-203ENST00000392745 ADAMTS12P58397 1594 aa27.58■■■□□ 2.01
TRAF3-203ENST00000392745 EFCAB5A4FU69 1503 aa27.56■■■□□ 2
TRAF3-203ENST00000392745 FHOD3Q2V2M9 1422 aa27.56■■■□□ 2
TRAF3-203ENST00000392745 EIF4G3O43432 1585 aaKnown RBP27.53■■■□□ 2
TRAF3-203ENST00000392745 CENPBP07199 599 aaPredicted RBP27.52■■■□□ 2
TRAF3-203ENST00000392745 PCF11O94913 1555 aaKnown RBP27.45■■□□□ 1.99
TRAF3-203ENST00000392745 SAMD9Q5K651 1589 aa27.45■■□□□ 1.99
TRAF3-203ENST00000392745 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
TRAF3-203ENST00000392745 TIAM1Q13009 1591 aa27.44■■□□□ 1.98
TRAF3-203ENST00000392745 MAP3K1Q13233 1512 aa27.43■■□□□ 1.98
TRAF3-203ENST00000392745 HNRNPUL2Q1KMD3 747 aaKnown RBP27.4■■□□□ 1.98
TRAF3-203ENST00000392745 ATP1B4Q9UN42 357 aaPredicted RBP27.38■■□□□ 1.97
TRAF3-203ENST00000392745 CASKIN1Q8WXD9 1431 aa27.37■■□□□ 1.97
TRAF3-203ENST00000392745 IQGAP2Q13576 1575 aa27.37■■□□□ 1.97
TRAF3-203ENST00000392745 FMN1Q68DA7 1419 aa27.36■■□□□ 1.97
TRAF3-203ENST00000392745 FYCO1Q9BQS8 1478 aa27.35■■□□□ 1.97
TRAF3-203ENST00000392745 LRRC9Q6ZRR7 1453 aa27.33■■□□□ 1.97
TRAF3-203ENST00000392745 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
TRAF3-203ENST00000392745 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
TRAF3-203ENST00000392745 CFAP43Q8NDM7 1665 aa27.32■■□□□ 1.96
TRAF3-203ENST00000392745 ZNF316A6NFI3 1004 aaPredicted RBP27.29■■□□□ 1.96
TRAF3-203ENST00000392745 RRBP1Q9P2E9 1410 aaKnown RBP27.28■■□□□ 1.96
TRAF3-203ENST00000392745 CHMP7Q8WUX9 453 aaPredicted RBP27.26■■□□□ 1.95
TRAF3-203ENST00000392745 KIAA0586Q9BVV6 1533 aa27.25■■□□□ 1.95
TRAF3-203ENST00000392745 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
TRAF3-203ENST00000392745 UGGT2Q9NYU1 1516 aa27.22■■□□□ 1.95
TRAF3-203ENST00000392745 LRRIQ1Q96JM4 1722 aa27.21■■□□□ 1.95
TRAF3-203ENST00000392745 FBLN2P98095 1184 aa27.21■■□□□ 1.95
TRAF3-203ENST00000392745 CCNB3Q8WWL7 1395 aa27.19■■□□□ 1.94
TRAF3-203ENST00000392745 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
TRAF3-203ENST00000392745 PHLDB1Q86UU1 1377 aa27.17■■□□□ 1.94
TRAF3-203ENST00000392745 YTHDC1Q96MU7 727 aaKnown RBP27.15■■□□□ 1.94
TRAF3-203ENST00000392745 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
TRAF3-203ENST00000392745 KIAA0556O60303 1618 aa27.09■■□□□ 1.93
TRAF3-203ENST00000392745 NUP160Q12769 1436 aa27.08■■□□□ 1.93
TRAF3-203ENST00000392745 MTUS2Q5JR59 1369 aa27.05■■□□□ 1.92
TRAF3-203ENST00000392745 MIER1Q8N108 512 aa27.05■■□□□ 1.92
TRAF3-203ENST00000392745 ITGAEP38570 1179 aa27.03■■□□□ 1.92
TRAF3-203ENST00000392745 HECW1Q76N89 1606 aa27.01■■□□□ 1.91
TRAF3-203ENST00000392745 JPH4Q96JJ6 628 aa27■■□□□ 1.91
TRAF3-203ENST00000392745 MYT1Q01538 1121 aa26.99■■□□□ 1.91
TRAF3-203ENST00000392745 CCDC18Q5T9S5 1454 aa26.99■■□□□ 1.91
TRAF3-203ENST00000392745 EPRSP07814 1512 aaKnown RBP26.98■■□□□ 1.91
TRAF3-203ENST00000392745 MAGI3Q5TCQ9 1506 aa26.97■■□□□ 1.91
TRAF3-203ENST00000392745 FAM50AQ14320 339 aaKnown RBP26.96■■□□□ 1.91
TRAF3-203ENST00000392745 ARID3CA6NKF2 412 aa26.94■■□□□ 1.9
TRAF3-203ENST00000392745 CDK13Q14004 1512 aaKnown RBP26.93■■□□□ 1.9
TRAF3-203ENST00000392745 EHBP1L1Q8N3D4 1523 aa26.93■■□□□ 1.9
TRAF3-203ENST00000392745 NCOA2Q15596 1464 aa26.92■■□□□ 1.9
TRAF3-203ENST00000392745 SUPT6HQ7KZ85 1726 aaKnown RBP26.9■■□□□ 1.9
TRAF3-203ENST00000392745 CHD1O14646 1710 aa26.89■■□□□ 1.9
TRAF3-203ENST00000392745 FGD6Q6ZV73 1430 aa26.88■■□□□ 1.89
TRAF3-203ENST00000392745 RAPGEF6Q8TEU7 1601 aa26.88■■□□□ 1.89
TRAF3-203ENST00000392745 CARMIL2Q6F5E8 1435 aa26.87■■□□□ 1.89
TRAF3-203ENST00000392745 NUP153P49790 1475 aaKnown RBP26.87■■□□□ 1.89
TRAF3-203ENST00000392745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.85■■□□□ 1.89
TRAF3-203ENST00000392745 ARHGEF11O15085 1522 aa26.84■■□□□ 1.89
TRAF3-203ENST00000392745 DHX57Q6P158 1386 aaKnown RBP26.83■■□□□ 1.89
TRAF3-203ENST00000392745 MYOM3Q5VTT5 1437 aa26.83■■□□□ 1.88
TRAF3-203ENST00000392745 PLB1Q6P1J6 1458 aa26.82■■□□□ 1.88
TRAF3-203ENST00000392745 RAB3GAP2Q9H2M9 1393 aa26.77■■□□□ 1.88
TRAF3-203ENST00000392745 PRG4Q92954 1404 aaPredicted RBP26.75■■□□□ 1.87
TRAF3-203ENST00000392745 SETD5Q9C0A6 1442 aa26.74■■□□□ 1.87
TRAF3-203ENST00000392745 PTPN23Q9H3S7 1636 aa26.7■■□□□ 1.86
TRAF3-203ENST00000392745 PTPRKQ15262 1439 aa26.69■■□□□ 1.86
TRAF3-203ENST00000392745 CLSPNQ9HAW4 1339 aa26.68■■□□□ 1.86
TRAF3-203ENST00000392745 CDK11AQ9UQ88 783 aaPredicted RBP26.67■■□□□ 1.86
TRAF3-203ENST00000392745 ABCA8O94911 1581 aa26.67■■□□□ 1.86
TRAF3-203ENST00000392745 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
TRAF3-203ENST00000392745 TCOF1Q13428 1488 aaKnown RBP26.62■■□□□ 1.85
TRAF3-203ENST00000392745 PTPRGP23470 1445 aa26.62■■□□□ 1.85
TRAF3-203ENST00000392745 MIA2Q96PC5 1412 aa26.6■■□□□ 1.85
TRAF3-203ENST00000392745 TROQ12816 1431 aaPredicted RBP26.6■■□□□ 1.85
TRAF3-203ENST00000392745 ATP10BO94823 1461 aa26.57■■□□□ 1.84
TRAF3-203ENST00000392745 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
TRAF3-203ENST00000392745 HFM1A2PYH4 1435 aa26.53■■□□□ 1.84
TRAF3-203ENST00000392745 CLASP1Q7Z460 1538 aa26.52■■□□□ 1.84
TRAF3-203ENST00000392745 KIF14Q15058 1648 aa26.52■■□□□ 1.84
TRAF3-203ENST00000392745 MAPKBP1O60336 1514 aa26.52■■□□□ 1.84
TRAF3-203ENST00000392745 ADCY10Q96PN6 1610 aa26.5■■□□□ 1.83
TRAF3-203ENST00000392745 PLEKHD1A6NEE1 506 aa26.49■■□□□ 1.83
TRAF3-203ENST00000392745 NAIPQ13075 1403 aa26.49■■□□□ 1.83
TRAF3-203ENST00000392745 ZNF644Q9H582 1327 aaPredicted RBP26.49■■□□□ 1.83
TRAF3-203ENST00000392745 CHIC2Q9UKJ5 165 aa26.48■■□□□ 1.83
TRAF3-203ENST00000392745 UACAQ9BZF9 1416 aa26.45■■□□□ 1.83
TRAF3-203ENST00000392745 GPATCH8Q9UKJ3 1502 aaKnown RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms