RNA–Protein interactions for RNA: ENST00000391921.8

CD55-206, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best) BASIC

Gene CD55, Length 2,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-206ENST00000391921 TIAM1Q13009 1591 aa27.8■■■□□ 2.04
CD55-206ENST00000391921 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
CD55-206ENST00000391921 ITGAEP38570 1179 aa27.78■■■□□ 2.04
CD55-206ENST00000391921 PCF11O94913 1555 aaKnown RBP27.77■■■□□ 2.04
CD55-206ENST00000391921 CCNB3Q8WWL7 1395 aa27.76■■■□□ 2.03
CD55-206ENST00000391921 CTTNBP2Q8WZ74 1663 aa27.75■■■□□ 2.03
CD55-206ENST00000391921 TARBP1Q13395 1621 aaKnown RBP27.75■■■□□ 2.03
CD55-206ENST00000391921 LRRC9Q6ZRR7 1453 aa27.72■■■□□ 2.03
CD55-206ENST00000391921 EFCAB5A4FU69 1503 aa27.7■■■□□ 2.03
CD55-206ENST00000391921 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.02
CD55-206ENST00000391921 MAP3K1Q13233 1512 aa27.7■■■□□ 2.02
CD55-206ENST00000391921 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.023e-7■■■■□ 25.8
CD55-206ENST00000391921 PHLDB1Q86UU1 1377 aa27.64■■■□□ 2.02
CD55-206ENST00000391921 FYCO1Q9BQS8 1478 aa27.61■■■□□ 2.01
CD55-206ENST00000391921 CASKIN1Q8WXD9 1431 aa27.6■■■□□ 2.01
CD55-206ENST00000391921 DHX57Q6P158 1386 aaKnown RBP27.59■■■□□ 2.01
CD55-206ENST00000391921 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
CD55-206ENST00000391921 FMN1Q68DA7 1419 aa27.57■■■□□ 2
CD55-206ENST00000391921 DIEXFQ68CQ4 756 aaKnown RBP27.57■■■□□ 2
CD55-206ENST00000391921 FAM50AQ14320 339 aaKnown RBP27.56■■■□□ 2
CD55-206ENST00000391921 PBRM1Q86U86 1689 aa27.55■■■□□ 2
CD55-206ENST00000391921 ZNF608Q9ULD9 1512 aaPredicted RBP27.54■■■□□ 2
CD55-206ENST00000391921 SAMD9Q5K651 1589 aa27.52■■■□□ 2
CD55-206ENST00000391921 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
CD55-206ENST00000391921 ZNF316A6NFI3 1004 aaPredicted RBP27.5■■□□□ 1.99
CD55-206ENST00000391921 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
CD55-206ENST00000391921 GRIN2BQ13224 1484 aa27.47■■□□□ 1.99
CD55-206ENST00000391921 WDR62O43379 1518 aa27.47■■□□□ 1.99
CD55-206ENST00000391921 ADAMTS12P58397 1594 aa27.46■■□□□ 1.99
CD55-206ENST00000391921 PELP1Q8IZL8 1130 aaKnown RBP27.46■■□□□ 1.99
CD55-206ENST00000391921 IFT140Q96RY7 1462 aa27.46■■□□□ 1.99
CD55-206ENST00000391921 RAB3GAP2Q9H2M9 1393 aa27.43■■□□□ 1.98
CD55-206ENST00000391921 MTUS2Q5JR59 1369 aa27.41■■□□□ 1.98
CD55-206ENST00000391921 CLSPNQ9HAW4 1339 aa27.41■■□□□ 1.98
CD55-206ENST00000391921 IQGAP2Q13576 1575 aa27.37■■□□□ 1.97
CD55-206ENST00000391921 LRRIQ1Q96JM4 1722 aa27.36■■□□□ 1.97
CD55-206ENST00000391921 SETD5Q9C0A6 1442 aa27.32■■□□□ 1.96
CD55-206ENST00000391921 ARID3CA6NKF2 412 aa27.31■■□□□ 1.96
CD55-206ENST00000391921 EIF4G3O43432 1585 aaKnown RBP27.29■■□□□ 1.96
CD55-206ENST00000391921 FGD6Q6ZV73 1430 aa27.28■■□□□ 1.96
CD55-206ENST00000391921 THOC2Q8NI27 1593 aaKnown RBP27.24■■□□□ 1.95
CD55-206ENST00000391921 NCOA2Q15596 1464 aa27.24■■□□□ 1.95
CD55-206ENST00000391921 MAGI3Q5TCQ9 1506 aa27.21■■□□□ 1.95
CD55-206ENST00000391921 FBLN2P98095 1184 aa27.2■■□□□ 1.95
CD55-206ENST00000391921 GRIN2AQ12879 1464 aa27.2■■□□□ 1.94
CD55-206ENST00000391921 MAPKBP1O60336 1514 aa27.19■■□□□ 1.94
CD55-206ENST00000391921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.18■■□□□ 1.944e-6■■□□□ 11.8
CD55-206ENST00000391921 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
CD55-206ENST00000391921 KIAA0586Q9BVV6 1533 aa27.17■■□□□ 1.94
CD55-206ENST00000391921 UGGT2Q9NYU1 1516 aa27.17■■□□□ 1.94
CD55-206ENST00000391921 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
CD55-206ENST00000391921 MYOM3Q5VTT5 1437 aa27.16■■□□□ 1.94
CD55-206ENST00000391921 CDK13Q14004 1512 aaKnown RBP27.15■■□□□ 1.94
CD55-206ENST00000391921 HECW1Q76N89 1606 aa27.15■■□□□ 1.94
CD55-206ENST00000391921 CCDC18Q5T9S5 1454 aa27.15■■□□□ 1.94
CD55-206ENST00000391921 SUPT6HQ7KZ85 1726 aaKnown RBP27.14■■□□□ 1.94
CD55-206ENST00000391921 EPRSP07814 1512 aaKnown RBP27.14■■□□□ 1.94
CD55-206ENST00000391921 PTPRKQ15262 1439 aa27.13■■□□□ 1.93
CD55-206ENST00000391921 DISP1Q96F81 1524 aa27.11■■□□□ 1.93
CD55-206ENST00000391921 SIN3AQ96ST3 1273 aa27.09■■□□□ 1.93
CD55-206ENST00000391921 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
CD55-206ENST00000391921 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
CD55-206ENST00000391921 NEUROD1Q13562 356 aa27.08■■□□□ 1.93
CD55-206ENST00000391921 MIER1Q8N108 512 aa27.07■■□□□ 1.92
CD55-206ENST00000391921 SYNJ2O15056 1496 aa27.05■■□□□ 1.92
CD55-206ENST00000391921 ARHGEF11O15085 1522 aa27.04■■□□□ 1.92
CD55-206ENST00000391921 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
CD55-206ENST00000391921 PTPN23Q9H3S7 1636 aa27.01■■□□□ 1.91
CD55-206ENST00000391921 CHIC2Q9UKJ5 165 aa26.99■■□□□ 1.91
CD55-206ENST00000391921 HFM1A2PYH4 1435 aa26.98■■□□□ 1.91
CD55-206ENST00000391921 SCAF1Q9H7N4 1312 aaKnown RBP26.97■■□□□ 1.91
CD55-206ENST00000391921 NUP153P49790 1475 aaKnown RBP26.96■■□□□ 1.91
CD55-206ENST00000391921 RRP7BPQ9NSQ0 103 aa26.95■■□□□ 1.9
CD55-206ENST00000391921 NAIPQ13075 1403 aa26.94■■□□□ 1.9
CD55-206ENST00000391921 YTHDC1Q96MU7 727 aaKnown RBP26.93■■□□□ 1.9
CD55-206ENST00000391921 JPH4Q96JJ6 628 aa26.92■■□□□ 1.9
CD55-206ENST00000391921 ACIN1Q9UKV3 1341 aaKnown RBP26.92■■□□□ 1.9
CD55-206ENST00000391921 RAPGEF6Q8TEU7 1601 aa26.91■■□□□ 1.9
CD55-206ENST00000391921 PLB1Q6P1J6 1458 aa26.89■■□□□ 1.9
CD55-206ENST00000391921 NUP160Q12769 1436 aa26.89■■□□□ 1.89
CD55-206ENST00000391921 TCOF1Q13428 1488 aaKnown RBP26.88■■□□□ 1.89
CD55-206ENST00000391921 CENPBP07199 599 aaPredicted RBP26.86■■□□□ 1.89
CD55-206ENST00000391921 UACAQ9BZF9 1416 aa26.85■■□□□ 1.89
CD55-206ENST00000391921 MIA2Q96PC5 1412 aa26.83■■□□□ 1.89
CD55-206ENST00000391921 CDK11AQ9UQ88 783 aaPredicted RBP26.82■■□□□ 1.88
CD55-206ENST00000391921 ZNF644Q9H582 1327 aaPredicted RBP26.82■■□□□ 1.88
CD55-206ENST00000391921 CARMIL2Q6F5E8 1435 aa26.82■■□□□ 1.88
CD55-206ENST00000391921 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
CD55-206ENST00000391921 TRIM52Q96A61 297 aa26.75■■□□□ 1.87
CD55-206ENST00000391921 TIMELESSQ9UNS1 1208 aa26.73■■□□□ 1.87
CD55-206ENST00000391921 TROQ12816 1431 aaPredicted RBP26.72■■□□□ 1.87
CD55-206ENST00000391921 PPP1R15AO75807 674 aaPredicted RBP26.72■■□□□ 1.87
CD55-206ENST00000391921 KDM6BO15054 1643 aa26.72■■□□□ 1.87
CD55-206ENST00000391921 TONSLQ96HA7 1378 aa26.71■■□□□ 1.87
CD55-206ENST00000391921 HIRIP3Q9BW71 556 aaPredicted RBP26.69■■□□□ 1.86
CD55-206ENST00000391921 DAPK1P53355 1430 aa26.69■■□□□ 1.86
CD55-206ENST00000391921 GCC2Q8IWJ2 1684 aa26.67■■□□□ 1.86
CD55-206ENST00000391921 ZNF777Q9ULD5 760 aaPredicted RBP26.67■■□□□ 1.86
CD55-206ENST00000391921 CFDP1Q9UEE9 299 aaPredicted RBP26.67■■□□□ 1.86
CD55-206ENST00000391921 ABCC5O15440 1437 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms