RNA–Protein interactions for RNA: ENST00000390438.2

TRAV8-4-201, Transcript of T cell receptor alpha variable 8-4, humanhuman

APPRIS P1 BASIC

Gene TRAV8-4, Length 469 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4-201ENST00000390438 RUSC2Q8N2Y8 1516 aa10.53□□□□□ -0.72
TRAV8-4-201ENST00000390438 KIAA0586Q9BVV6 1533 aa10.53□□□□□ -0.72
TRAV8-4-201ENST00000390438 JPH4Q96JJ6 628 aa10.51□□□□□ -0.73
TRAV8-4-201ENST00000390438 RAPGEF2Q9Y4G8 1499 aa10.5□□□□□ -0.73
TRAV8-4-201ENST00000390438 EEA1Q15075 1411 aa10.5□□□□□ -0.73
TRAV8-4-201ENST00000390438 PRG4Q92954 1404 aaPredicted RBP10.5□□□□□ -0.73
TRAV8-4-201ENST00000390438 CARMIL2Q6F5E8 1435 aa10.48□□□□□ -0.73
TRAV8-4-201ENST00000390438 IQGAP2Q13576 1575 aa10.45□□□□□ -0.74
TRAV8-4-201ENST00000390438 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
TRAV8-4-201ENST00000390438 PRXQ9BXM0 1461 aa10.42□□□□□ -0.74
TRAV8-4-201ENST00000390438 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRAV8-4-201ENST00000390438 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
TRAV8-4-201ENST00000390438 FAM9AQ8IZU1 332 aaPredicted RBP10.42□□□□□ -0.74
TRAV8-4-201ENST00000390438 SENP3Q9H4L4 574 aaPredicted RBP10.42□□□□□ -0.74
TRAV8-4-201ENST00000390438 TNIKQ9UKE5 1360 aa10.41□□□□□ -0.74
TRAV8-4-201ENST00000390438 GOLGA3Q08378 1498 aa10.41□□□□□ -0.74
TRAV8-4-201ENST00000390438 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.74
TRAV8-4-201ENST00000390438 UGGT2Q9NYU1 1516 aa10.39□□□□□ -0.75
TRAV8-4-201ENST00000390438 CTTNBP2Q8WZ74 1663 aa10.39□□□□□ -0.75
TRAV8-4-201ENST00000390438 PTPRGP23470 1445 aa10.39□□□□□ -0.75
TRAV8-4-201ENST00000390438 KIAA0556O60303 1618 aa10.34□□□□□ -0.75
TRAV8-4-201ENST00000390438 MAPKBP1O60336 1514 aa10.33□□□□□ -0.76
TRAV8-4-201ENST00000390438 DISP1Q96F81 1524 aa10.33□□□□□ -0.76
TRAV8-4-201ENST00000390438 UHRF1BP1LA0JNW5 1464 aa10.33□□□□□ -0.76
TRAV8-4-201ENST00000390438 KIF21BO75037 1637 aa10.32□□□□□ -0.76
TRAV8-4-201ENST00000390438 ADCY10Q96PN6 1610 aa10.32□□□□□ -0.76
TRAV8-4-201ENST00000390438 UACAQ9BZF9 1416 aa10.32□□□□□ -0.76
TRAV8-4-201ENST00000390438 ABCC2Q92887 1545 aa10.31□□□□□ -0.76
TRAV8-4-201ENST00000390438 PLB1Q6P1J6 1458 aa10.29□□□□□ -0.76
TRAV8-4-201ENST00000390438 ABCC10Q5T3U5 1492 aa10.28□□□□□ -0.76
TRAV8-4-201ENST00000390438 TTBK1Q5TCY1 1321 aaPredicted RBP10.28□□□□□ -0.76
TRAV8-4-201ENST00000390438 EFCAB5A4FU69 1503 aa10.26□□□□□ -0.77
TRAV8-4-201ENST00000390438 KDM5BQ9UGL1 1544 aa10.25□□□□□ -0.77
TRAV8-4-201ENST00000390438 SAMD9Q5K651 1589 aa10.25□□□□□ -0.77
TRAV8-4-201ENST00000390438 DIP2BQ9P265 1576 aa10.24□□□□□ -0.77
TRAV8-4-201ENST00000390438 FAM69CQ0P6D2 419 aa10.24□□□□□ -0.77
TRAV8-4-201ENST00000390438 ABCA8O94911 1581 aa10.22□□□□□ -0.77
TRAV8-4-201ENST00000390438 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
TRAV8-4-201ENST00000390438 ASXL2Q76L83 1435 aa10.22□□□□□ -0.77
TRAV8-4-201ENST00000390438 KIF13AQ9H1H9 1805 aa10.21□□□□□ -0.77
TRAV8-4-201ENST00000390438 GLI2P10070 1586 aa10.21□□□□□ -0.78
TRAV8-4-201ENST00000390438 ZCCHC11Q5TAX3 1644 aaKnown RBP10.2□□□□□ -0.78
TRAV8-4-201ENST00000390438 WDR7Q9Y4E6 1490 aa10.18□□□□□ -0.78
TRAV8-4-201ENST00000390438 RAPGEF6Q8TEU7 1601 aa10.18□□□□□ -0.78
TRAV8-4-201ENST00000390438 EPRSP07814 1512 aaKnown RBP10.17□□□□□ -0.78
TRAV8-4-201ENST00000390438 TEX14Q8IWB6 1497 aa10.17□□□□□ -0.78
TRAV8-4-201ENST00000390438 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
TRAV8-4-201ENST00000390438 FMN1Q68DA7 1419 aa10.16□□□□□ -0.78
TRAV8-4-201ENST00000390438 PHF23Q9BUL5 403 aaPredicted RBP10.16□□□□□ -0.78
TRAV8-4-201ENST00000390438 FHOD3Q2V2M9 1422 aa10.16□□□□□ -0.78
TRAV8-4-201ENST00000390438 RANGAP1P46060 587 aaPredicted RBP10.14□□□□□ -0.79
TRAV8-4-201ENST00000390438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.13□□□□□ -0.79
TRAV8-4-201ENST00000390438 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
TRAV8-4-201ENST00000390438 KDM6BO15054 1643 aa10.12□□□□□ -0.79
TRAV8-4-201ENST00000390438 CFAP43Q8NDM7 1665 aa10.12□□□□□ -0.79
TRAV8-4-201ENST00000390438 MAP3K4Q9Y6R4 1608 aa10.11□□□□□ -0.79
TRAV8-4-201ENST00000390438 ATP10BO94823 1461 aa10.11□□□□□ -0.79
TRAV8-4-201ENST00000390438 HECW1Q76N89 1606 aa10.11□□□□□ -0.79
TRAV8-4-201ENST00000390438 TSPOAP1O95153 1857 aa10.1□□□□□ -0.79
TRAV8-4-201ENST00000390438 CD109Q6YHK3 1445 aa10.1□□□□□ -0.79
TRAV8-4-201ENST00000390438 CDK11AQ9UQ88 783 aaPredicted RBP10.1□□□□□ -0.79
TRAV8-4-201ENST00000390438 MAGI3Q5TCQ9 1506 aa10.1□□□□□ -0.79
TRAV8-4-201ENST00000390438 PHLDB1Q86UU1 1377 aa10.1□□□□□ -0.79
TRAV8-4-201ENST00000390438 NUP153P49790 1475 aaKnown RBP10.1□□□□□ -0.79
TRAV8-4-201ENST00000390438 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
TRAV8-4-201ENST00000390438 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
TRAV8-4-201ENST00000390438 EHMT2Q96KQ7 1210 aa10.09□□□□□ -0.79
TRAV8-4-201ENST00000390438 KCNH8Q96L42 1107 aa10.08□□□□□ -0.8
TRAV8-4-201ENST00000390438 ABCA9Q8IUA7 1624 aa10.06□□□□□ -0.8
TRAV8-4-201ENST00000390438 CLIP1P30622 1438 aa10.06□□□□□ -0.8
TRAV8-4-201ENST00000390438 PPRC1Q5VV67 1664 aaKnown RBP10.06□□□□□ -0.8
TRAV8-4-201ENST00000390438 CCDC18Q5T9S5 1454 aa10.05□□□□□ -0.8
TRAV8-4-201ENST00000390438 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
TRAV8-4-201ENST00000390438 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
TRAV8-4-201ENST00000390438 CASKIN1Q8WXD9 1431 aa10.03□□□□□ -0.8
TRAV8-4-201ENST00000390438 CFAP74Q9C0B2 1584 aa10.03□□□□□ -0.8
TRAV8-4-201ENST00000390438 NEO1Q92859 1461 aa10.03□□□□□ -0.8
TRAV8-4-201ENST00000390438 FYCO1Q9BQS8 1478 aa10.03□□□□□ -0.8
TRAV8-4-201ENST00000390438 CDK13Q14004 1512 aaKnown RBP10□□□□□ -0.81
TRAV8-4-201ENST00000390438 ARAP3Q8WWN8 1544 aa10□□□□□ -0.81
TRAV8-4-201ENST00000390438 KIF14Q15058 1648 aa10□□□□□ -0.81
TRAV8-4-201ENST00000390438 TROQ12816 1431 aaPredicted RBP9.99□□□□□ -0.81
TRAV8-4-201ENST00000390438 CEP162Q5TB80 1403 aa9.99□□□□□ -0.81
TRAV8-4-201ENST00000390438 PCF11O94913 1555 aaKnown RBP9.98□□□□□ -0.81
TRAV8-4-201ENST00000390438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRAV8-4-201ENST00000390438 FANCAO15360 1455 aa9.97□□□□□ -0.81
TRAV8-4-201ENST00000390438 PLCH2O75038 1416 aa9.95□□□□□ -0.82
TRAV8-4-201ENST00000390438 MYO5CQ9NQX4 1742 aa9.94□□□□□ -0.82
TRAV8-4-201ENST00000390438 TTC37Q6PGP7 1564 aa9.94□□□□□ -0.82
TRAV8-4-201ENST00000390438 DENND4BO75064 1496 aaPredicted RBP9.94□□□□□ -0.82
TRAV8-4-201ENST00000390438 COL17A1Q9UMD9 1497 aaPredicted RBP9.94□□□□□ -0.82
TRAV8-4-201ENST00000390438 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
TRAV8-4-201ENST00000390438 EFCAB2Q5VUJ9 269 aa9.94□□□□□ -0.82
TRAV8-4-201ENST00000390438 ADGRL1O94910 1474 aa9.91□□□□□ -0.82
TRAV8-4-201ENST00000390438 MAGI2Q86UL8 1455 aa9.91□□□□□ -0.82
TRAV8-4-201ENST00000390438 MTUS2Q5JR59 1369 aa9.91□□□□□ -0.82
TRAV8-4-201ENST00000390438 ARHGAP5Q13017 1502 aa9.91□□□□□ -0.82
TRAV8-4-201ENST00000390438 LRRIQ1Q96JM4 1722 aa9.9□□□□□ -0.83
TRAV8-4-201ENST00000390438 ZMYM4Q5VZL5 1548 aa9.89□□□□□ -0.83
TRAV8-4-201ENST00000390438 EHBP1L1Q8N3D4 1523 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms