RNA–Protein interactions for RNA: ENST00000390393.3

TRBV19-201, Transcript of T cell receptor beta variable 19, humanhuman

APPRIS P1 BASIC

Gene TRBV19, Length 552 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19-201ENST00000390393 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
TRBV19-201ENST00000390393 CEP170Q5SW79 1584 aa12.19□□□□□ -0.46
TRBV19-201ENST00000390393 CUL7Q14999 1698 aa12.19□□□□□ -0.46
TRBV19-201ENST00000390393 KIAA0586Q9BVV6 1533 aa12.18□□□□□ -0.46
TRBV19-201ENST00000390393 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
TRBV19-201ENST00000390393 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
TRBV19-201ENST00000390393 PRXQ9BXM0 1461 aa12.15□□□□□ -0.46
TRBV19-201ENST00000390393 EEA1Q15075 1411 aa12.15□□□□□ -0.46
TRBV19-201ENST00000390393 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
TRBV19-201ENST00000390393 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
TRBV19-201ENST00000390393 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
TRBV19-201ENST00000390393 FAM9AQ8IZU1 332 aaPredicted RBP12.08□□□□□ -0.48
TRBV19-201ENST00000390393 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
TRBV19-201ENST00000390393 CARMIL2Q6F5E8 1435 aa12.04□□□□□ -0.48
TRBV19-201ENST00000390393 IQGAP2Q13576 1575 aa12.02□□□□□ -0.49
TRBV19-201ENST00000390393 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
TRBV19-201ENST00000390393 PTPRGP23470 1445 aa12.02□□□□□ -0.49
TRBV19-201ENST00000390393 UGGT2Q9NYU1 1516 aa12.01□□□□□ -0.49
TRBV19-201ENST00000390393 FOXD1Q16676 465 aa12.01□□□□□ -0.49
TRBV19-201ENST00000390393 DISP1Q96F81 1524 aa11.99□□□□□ -0.49
TRBV19-201ENST00000390393 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRBV19-201ENST00000390393 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
TRBV19-201ENST00000390393 KIF21BO75037 1637 aa11.94□□□□□ -0.5
TRBV19-201ENST00000390393 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
TRBV19-201ENST00000390393 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
TRBV19-201ENST00000390393 TRHP20396 242 aaPredicted RBP11.92□□□□□ -0.5
TRBV19-201ENST00000390393 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
TRBV19-201ENST00000390393 UHRF1BP1LA0JNW5 1464 aa11.91□□□□□ -0.5
TRBV19-201ENST00000390393 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
TRBV19-201ENST00000390393 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
TRBV19-201ENST00000390393 CTTNBP2Q8WZ74 1663 aa11.89□□□□□ -0.51
TRBV19-201ENST00000390393 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
TRBV19-201ENST00000390393 ABCC2Q92887 1545 aa11.86□□□□□ -0.51
TRBV19-201ENST00000390393 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
TRBV19-201ENST00000390393 RANGAP1P46060 587 aaPredicted RBP11.85□□□□□ -0.51
TRBV19-201ENST00000390393 KDM5BQ9UGL1 1544 aa11.85□□□□□ -0.51
TRBV19-201ENST00000390393 PLB1Q6P1J6 1458 aa11.84□□□□□ -0.51
TRBV19-201ENST00000390393 MAPKBP1O60336 1514 aa11.84□□□□□ -0.51
TRBV19-201ENST00000390393 SAMD9Q5K651 1589 aa11.84□□□□□ -0.51
TRBV19-201ENST00000390393 FAM69CQ0P6D2 419 aa11.82□□□□□ -0.52
TRBV19-201ENST00000390393 ABCC10Q5T3U5 1492 aa11.82□□□□□ -0.52
TRBV19-201ENST00000390393 ABCA8O94911 1581 aa11.81□□□□□ -0.52
TRBV19-201ENST00000390393 EFCAB5A4FU69 1503 aa11.8□□□□□ -0.52
TRBV19-201ENST00000390393 FHOD3Q2V2M9 1422 aa11.79□□□□□ -0.52
TRBV19-201ENST00000390393 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
TRBV19-201ENST00000390393 ARHGAP35Q9NRY4 1499 aa11.78□□□□□ -0.52
TRBV19-201ENST00000390393 ATP10BO94823 1461 aa11.77□□□□□ -0.52
TRBV19-201ENST00000390393 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
TRBV19-201ENST00000390393 FMN1Q68DA7 1419 aa11.75□□□□□ -0.53
TRBV19-201ENST00000390393 NUP153P49790 1475 aaKnown RBP11.72□□□□□ -0.53
TRBV19-201ENST00000390393 ARID3CA6NKF2 412 aa11.72□□□□□ -0.53
TRBV19-201ENST00000390393 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
TRBV19-201ENST00000390393 GLI2P10070 1586 aa11.71□□□□□ -0.53
TRBV19-201ENST00000390393 DIP2BQ9P265 1576 aa11.71□□□□□ -0.53
TRBV19-201ENST00000390393 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.53
TRBV19-201ENST00000390393 WDR7Q9Y4E6 1490 aa11.71□□□□□ -0.53
TRBV19-201ENST00000390393 CLIP1P30622 1438 aa11.71□□□□□ -0.53
TRBV19-201ENST00000390393 PLEKHD1A6NEE1 506 aa11.71□□□□□ -0.53
TRBV19-201ENST00000390393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
TRBV19-201ENST00000390393 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
TRBV19-201ENST00000390393 ZCCHC11Q5TAX3 1644 aaKnown RBP11.71□□□□□ -0.54
TRBV19-201ENST00000390393 RAPGEF6Q8TEU7 1601 aa11.71□□□□□ -0.54
TRBV19-201ENST00000390393 ATP1B4Q9UN42 357 aaPredicted RBP11.67□□□□□ -0.54
TRBV19-201ENST00000390393 KIF13AQ9H1H9 1805 aa11.67□□□□□ -0.54
TRBV19-201ENST00000390393 CDK11AQ9UQ88 783 aaPredicted RBP11.66□□□□□ -0.54
TRBV19-201ENST00000390393 CASKIN1Q8WXD9 1431 aa11.66□□□□□ -0.54
TRBV19-201ENST00000390393 CEP162Q5TB80 1403 aa11.65□□□□□ -0.54
TRBV19-201ENST00000390393 CD109Q6YHK3 1445 aa11.65□□□□□ -0.54
TRBV19-201ENST00000390393 MAGI3Q5TCQ9 1506 aa11.61□□□□□ -0.55
TRBV19-201ENST00000390393 TEX14Q8IWB6 1497 aa11.6□□□□□ -0.55
TRBV19-201ENST00000390393 PHLDB1Q86UU1 1377 aa11.6□□□□□ -0.55
TRBV19-201ENST00000390393 HECW1Q76N89 1606 aa11.59□□□□□ -0.55
TRBV19-201ENST00000390393 MAP3K4Q9Y6R4 1608 aa11.59□□□□□ -0.55
TRBV19-201ENST00000390393 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
TRBV19-201ENST00000390393 FYCO1Q9BQS8 1478 aa11.58□□□□□ -0.56
TRBV19-201ENST00000390393 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
TRBV19-201ENST00000390393 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
TRBV19-201ENST00000390393 COL17A1Q9UMD9 1497 aaPredicted RBP11.57□□□□□ -0.56
TRBV19-201ENST00000390393 ABCA9Q8IUA7 1624 aa11.56□□□□□ -0.56
TRBV19-201ENST00000390393 PPRC1Q5VV67 1664 aaKnown RBP11.55□□□□□ -0.56
TRBV19-201ENST00000390393 CFAP43Q8NDM7 1665 aa11.55□□□□□ -0.56
TRBV19-201ENST00000390393 PLCH2O75038 1416 aa11.54□□□□□ -0.56
TRBV19-201ENST00000390393 PCF11O94913 1555 aaKnown RBP11.54□□□□□ -0.56
TRBV19-201ENST00000390393 EFCAB2Q5VUJ9 269 aa11.53□□□□□ -0.56
TRBV19-201ENST00000390393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRBV19-201ENST00000390393 ARAP3Q8WWN8 1544 aa11.53□□□□□ -0.56
TRBV19-201ENST00000390393 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.56
TRBV19-201ENST00000390393 NEO1Q92859 1461 aa11.52□□□□□ -0.56
TRBV19-201ENST00000390393 TSPOAP1O95153 1857 aa11.52□□□□□ -0.57
TRBV19-201ENST00000390393 KDM6BO15054 1643 aa11.51□□□□□ -0.57
TRBV19-201ENST00000390393 AKNAQ7Z591 1439 aa11.5□□□□□ -0.57
TRBV19-201ENST00000390393 RAPGEF3O95398 923 aa11.49□□□□□ -0.57
TRBV19-201ENST00000390393 ADRA2BP18089 450 aa11.48□□□□□ -0.57
TRBV19-201ENST00000390393 PPP6R1Q9UPN7 881 aa11.48□□□□□ -0.57
TRBV19-201ENST00000390393 MTUS2Q5JR59 1369 aa11.48□□□□□ -0.57
TRBV19-201ENST00000390393 FANCAO15360 1455 aa11.48□□□□□ -0.57
TRBV19-201ENST00000390393 LRRIQ1Q96JM4 1722 aa11.47□□□□□ -0.57
TRBV19-201ENST00000390393 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
TRBV19-201ENST00000390393 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
TRBV19-201ENST00000390393 KIF14Q15058 1648 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms