RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
TRBV4-1-201ENST00000390357 KIAA0586Q9BVV6 1533 aa23.39■■□□□ 1.34
TRBV4-1-201ENST00000390357 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
TRBV4-1-201ENST00000390357 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
TRBV4-1-201ENST00000390357 NPM1P06748 294 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRBV4-1-201ENST00000390357 CARMIL2Q6F5E8 1435 aa23.2■■□□□ 1.3
TRBV4-1-201ENST00000390357 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
TRBV4-1-201ENST00000390357 PTPRGP23470 1445 aa23.14■■□□□ 1.29
TRBV4-1-201ENST00000390357 IQGAP2Q13576 1575 aa23.14■■□□□ 1.29
TRBV4-1-201ENST00000390357 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
TRBV4-1-201ENST00000390357 MAPKBP1O60336 1514 aa23.1■■□□□ 1.29
TRBV4-1-201ENST00000390357 ADCY10Q96PN6 1610 aa23.09■■□□□ 1.29
TRBV4-1-201ENST00000390357 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.29
TRBV4-1-201ENST00000390357 ABCC10Q5T3U5 1492 aa23.06■■□□□ 1.28
TRBV4-1-201ENST00000390357 FAM69CQ0P6D2 419 aa23.06■■□□□ 1.28
TRBV4-1-201ENST00000390357 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
TRBV4-1-201ENST00000390357 DISP1Q96F81 1524 aa22.99■■□□□ 1.27
TRBV4-1-201ENST00000390357 UHRF1BP1LA0JNW5 1464 aa22.98■■□□□ 1.27
TRBV4-1-201ENST00000390357 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
TRBV4-1-201ENST00000390357 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
TRBV4-1-201ENST00000390357 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
TRBV4-1-201ENST00000390357 ABCC2Q92887 1545 aa22.96■■□□□ 1.27
TRBV4-1-201ENST00000390357 CTTNBP2Q8WZ74 1663 aa22.94■■□□□ 1.26
TRBV4-1-201ENST00000390357 DIP2BQ9P265 1576 aa22.94■■□□□ 1.26
TRBV4-1-201ENST00000390357 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
TRBV4-1-201ENST00000390357 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
TRBV4-1-201ENST00000390357 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
TRBV4-1-201ENST00000390357 PLB1Q6P1J6 1458 aa22.91■■□□□ 1.26
TRBV4-1-201ENST00000390357 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
TRBV4-1-201ENST00000390357 EEA1Q15075 1411 aa22.86■■□□□ 1.25
TRBV4-1-201ENST00000390357 KDM5BQ9UGL1 1544 aa22.85■■□□□ 1.25
TRBV4-1-201ENST00000390357 ASXL2Q76L83 1435 aa22.84■■□□□ 1.25
TRBV4-1-201ENST00000390357 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
TRBV4-1-201ENST00000390357 GLI2P10070 1586 aa22.82■■□□□ 1.24
TRBV4-1-201ENST00000390357 TSPOAP1O95153 1857 aa22.79■■□□□ 1.24
TRBV4-1-201ENST00000390357 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
TRBV4-1-201ENST00000390357 KDM6BO15054 1643 aa22.73■■□□□ 1.23
TRBV4-1-201ENST00000390357 EPRSP07814 1512 aaKnown RBP22.71■■□□□ 1.23
TRBV4-1-201ENST00000390357 ABCA8O94911 1581 aa22.7■■□□□ 1.22
TRBV4-1-201ENST00000390357 TEX14Q8IWB6 1497 aa22.66■■□□□ 1.22
TRBV4-1-201ENST00000390357 WDR7Q9Y4E6 1490 aa22.66■■□□□ 1.22
TRBV4-1-201ENST00000390357 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.22
TRBV4-1-201ENST00000390357 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
TRBV4-1-201ENST00000390357 PPRC1Q5VV67 1664 aaKnown RBP22.62■■□□□ 1.21
TRBV4-1-201ENST00000390357 SAMD9Q5K651 1589 aa22.6■■□□□ 1.21
TRBV4-1-201ENST00000390357 KCNH8Q96L42 1107 aa22.58■■□□□ 1.21
TRBV4-1-201ENST00000390357 KIF21BO75037 1637 aa22.57■■□□□ 1.2
TRBV4-1-201ENST00000390357 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
TRBV4-1-201ENST00000390357 CD109Q6YHK3 1445 aa22.55■■□□□ 1.2
TRBV4-1-201ENST00000390357 CFAP43Q8NDM7 1665 aa22.55■■□□□ 1.2
TRBV4-1-201ENST00000390357 ATP10BO94823 1461 aa22.54■■□□□ 1.2
TRBV4-1-201ENST00000390357 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.2
TRBV4-1-201ENST00000390357 RAPGEF6Q8TEU7 1601 aa22.5■■□□□ 1.19
TRBV4-1-201ENST00000390357 EFCAB5A4FU69 1503 aa22.47■■□□□ 1.19
TRBV4-1-201ENST00000390357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.46■■□□□ 1.19
TRBV4-1-201ENST00000390357 RANGAP1P46060 587 aaPredicted RBP22.46■■□□□ 1.19
TRBV4-1-201ENST00000390357 HNRNPUL2Q1KMD3 747 aaKnown RBP22.46■■□□□ 1.19
TRBV4-1-201ENST00000390357 COL17A1Q9UMD9 1497 aaPredicted RBP22.46■■□□□ 1.19
TRBV4-1-201ENST00000390357 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
TRBV4-1-201ENST00000390357 PHLDB1Q86UU1 1377 aa22.45■■□□□ 1.18
TRBV4-1-201ENST00000390357 KDM4FA0A1W2PPD8 638 aa22.43■■□□□ 1.18
TRBV4-1-201ENST00000390357 ARID3CA6NKF2 412 aa22.42■■□□□ 1.18
TRBV4-1-201ENST00000390357 FHOD3Q2V2M9 1422 aa22.41■■□□□ 1.18
TRBV4-1-201ENST00000390357 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
TRBV4-1-201ENST00000390357 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.17
TRBV4-1-201ENST00000390357 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
TRBV4-1-201ENST00000390357 ARAP3Q8WWN8 1544 aa22.36■■□□□ 1.17
TRBV4-1-201ENST00000390357 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
TRBV4-1-201ENST00000390357 NEO1Q92859 1461 aa22.3■■□□□ 1.16
TRBV4-1-201ENST00000390357 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
TRBV4-1-201ENST00000390357 CDK11AQ9UQ88 783 aaPredicted RBP22.26■■□□□ 1.15
TRBV4-1-201ENST00000390357 ADGRL1O94910 1474 aa22.26■■□□□ 1.15
TRBV4-1-201ENST00000390357 ARHGAP35Q9NRY4 1499 aa22.23■■□□□ 1.15
TRBV4-1-201ENST00000390357 ATP1B4Q9UN42 357 aaPredicted RBP22.2■■□□□ 1.14
TRBV4-1-201ENST00000390357 HECW1Q76N89 1606 aa22.18■■□□□ 1.14
TRBV4-1-201ENST00000390357 CFAP74Q9C0B2 1584 aa22.17■■□□□ 1.14
TRBV4-1-201ENST00000390357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.17■■□□□ 1.14
TRBV4-1-201ENST00000390357 RAPGEF3O95398 923 aa22.17■■□□□ 1.14
TRBV4-1-201ENST00000390357 AKNAQ7Z591 1439 aa22.14■■□□□ 1.14
TRBV4-1-201ENST00000390357 CDK13Q14004 1512 aaKnown RBP22.13■■□□□ 1.13
TRBV4-1-201ENST00000390357 FANCAO15360 1455 aa22.13■■□□□ 1.13
TRBV4-1-201ENST00000390357 DENND4BO75064 1496 aaPredicted RBP22.12■■□□□ 1.13
TRBV4-1-201ENST00000390357 PLCH2O75038 1416 aa22.11■■□□□ 1.13
TRBV4-1-201ENST00000390357 EFCAB2Q5VUJ9 269 aa22.08■■□□□ 1.13
TRBV4-1-201ENST00000390357 TTC37Q6PGP7 1564 aa22.07■■□□□ 1.12
TRBV4-1-201ENST00000390357 CLIP1P30622 1438 aa22.06■■□□□ 1.12
TRBV4-1-201ENST00000390357 TROQ12816 1431 aaPredicted RBP22.06■■□□□ 1.12
TRBV4-1-201ENST00000390357 CASKIN1Q8WXD9 1431 aa22.05■■□□□ 1.12
TRBV4-1-201ENST00000390357 RICTORQ6R327 1708 aa22.04■■□□□ 1.12
TRBV4-1-201ENST00000390357 FRMPD1Q5SYB0 1578 aa22.04■■□□□ 1.12
TRBV4-1-201ENST00000390357 MAGI2Q86UL8 1455 aa22.03■■□□□ 1.12
TRBV4-1-201ENST00000390357 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
TRBV4-1-201ENST00000390357 MYO5CQ9NQX4 1742 aa22.02■■□□□ 1.12
TRBV4-1-201ENST00000390357 KIF14Q15058 1648 aa22.01■■□□□ 1.11
TRBV4-1-201ENST00000390357 ARID4BQ4LE39 1312 aaPredicted RBP22■■□□□ 1.11
TRBV4-1-201ENST00000390357 SCAPERQ9BY12 1400 aa21.99■■□□□ 1.11
TRBV4-1-201ENST00000390357 ZMYM4Q5VZL5 1548 aa21.98■■□□□ 1.11
TRBV4-1-201ENST00000390357 LRRIQ1Q96JM4 1722 aa21.97■■□□□ 1.11
TRBV4-1-201ENST00000390357 ADAMTSL3P82987 1691 aa21.97■■□□□ 1.11
TRBV4-1-201ENST00000390357 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms