RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
CAPRIN1-202ENST00000389645 WDR97A6NE52 1622 aa18.08■□□□□ 0.49
CAPRIN1-202ENST00000389645 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
CAPRIN1-202ENST00000389645 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
CAPRIN1-202ENST00000389645 KANK4Q5T7N3 995 aaPredicted RBP18.04■□□□□ 0.48
CAPRIN1-202ENST00000389645 YTHDC1Q96MU7 727 aaKnown RBP18.04■□□□□ 0.48
CAPRIN1-202ENST00000389645 ATP1B4Q9UN42 357 aaPredicted RBP18.04■□□□□ 0.48
CAPRIN1-202ENST00000389645 WDR62O43379 1518 aa18■□□□□ 0.47
CAPRIN1-202ENST00000389645 ITGAEP38570 1179 aa18■□□□□ 0.47
CAPRIN1-202ENST00000389645 CUL7Q14999 1698 aa17.99■□□□□ 0.47
CAPRIN1-202ENST00000389645 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
CAPRIN1-202ENST00000389645 FHOD3Q2V2M9 1422 aa17.95■□□□□ 0.46
CAPRIN1-202ENST00000389645 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
CAPRIN1-202ENST00000389645 FBLN2P98095 1184 aa17.92■□□□□ 0.46
CAPRIN1-202ENST00000389645 GRIN2BQ13224 1484 aa17.91■□□□□ 0.46
CAPRIN1-202ENST00000389645 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
CAPRIN1-202ENST00000389645 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
CAPRIN1-202ENST00000389645 CENPBP07199 599 aaPredicted RBP17.89■□□□□ 0.45
CAPRIN1-202ENST00000389645 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
CAPRIN1-202ENST00000389645 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
CAPRIN1-202ENST00000389645 CTTNBP2Q8WZ74 1663 aa17.86■□□□□ 0.45
CAPRIN1-202ENST00000389645 SNAPC4Q5SXM2 1469 aa17.85■□□□□ 0.45
CAPRIN1-202ENST00000389645 EIF4G3O43432 1585 aaKnown RBP17.84■□□□□ 0.45
CAPRIN1-202ENST00000389645 CHMP7Q8WUX9 453 aaPredicted RBP17.83■□□□□ 0.44
CAPRIN1-202ENST00000389645 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
CAPRIN1-202ENST00000389645 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
CAPRIN1-202ENST00000389645 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
CAPRIN1-202ENST00000389645 ARID3CA6NKF2 412 aa17.78■□□□□ 0.44
CAPRIN1-202ENST00000389645 PCF11O94913 1555 aaKnown RBP17.78■□□□□ 0.44
CAPRIN1-202ENST00000389645 EFCAB5A4FU69 1503 aa17.76■□□□□ 0.43
CAPRIN1-202ENST00000389645 TIAM1Q13009 1591 aa17.73■□□□□ 0.43
CAPRIN1-202ENST00000389645 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
CAPRIN1-202ENST00000389645 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
CAPRIN1-202ENST00000389645 IQGAP2Q13576 1575 aa17.71■□□□□ 0.43
CAPRIN1-202ENST00000389645 CASKIN1Q8WXD9 1431 aa17.71■□□□□ 0.43
CAPRIN1-202ENST00000389645 LRRC9Q6ZRR7 1453 aa17.7■□□□□ 0.42
CAPRIN1-202ENST00000389645 SAMD9Q5K651 1589 aa17.7■□□□□ 0.42
CAPRIN1-202ENST00000389645 MIER1Q8N108 512 aa17.68■□□□□ 0.42
CAPRIN1-202ENST00000389645 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
CAPRIN1-202ENST00000389645 FYCO1Q9BQS8 1478 aa17.67■□□□□ 0.42
CAPRIN1-202ENST00000389645 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
CAPRIN1-202ENST00000389645 SYNJ2O15056 1496 aa17.66■□□□□ 0.42
CAPRIN1-202ENST00000389645 FAM50AQ14320 339 aaKnown RBP17.66■□□□□ 0.42
CAPRIN1-202ENST00000389645 KIAA0586Q9BVV6 1533 aa17.65■□□□□ 0.42
CAPRIN1-202ENST00000389645 CCNB3Q8WWL7 1395 aa17.65■□□□□ 0.42
CAPRIN1-202ENST00000389645 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
CAPRIN1-202ENST00000389645 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
CAPRIN1-202ENST00000389645 JPH4Q96JJ6 628 aa17.62■□□□□ 0.41
CAPRIN1-202ENST00000389645 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
CAPRIN1-202ENST00000389645 CEP170Q5SW79 1584 aa17.61■□□□□ 0.41
CAPRIN1-202ENST00000389645 DISP1Q96F81 1524 aa17.59■□□□□ 0.41
CAPRIN1-202ENST00000389645 UGGT2Q9NYU1 1516 aa17.58■□□□□ 0.4
CAPRIN1-202ENST00000389645 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.4
CAPRIN1-202ENST00000389645 LRRIQ1Q96JM4 1722 aa17.57■□□□□ 0.4
CAPRIN1-202ENST00000389645 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
CAPRIN1-202ENST00000389645 NUP160Q12769 1436 aa17.53■□□□□ 0.4
CAPRIN1-202ENST00000389645 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
CAPRIN1-202ENST00000389645 KIAA0556O60303 1618 aa17.52■□□□□ 0.39
CAPRIN1-202ENST00000389645 EPRSP07814 1512 aaKnown RBP17.49■□□□□ 0.39
CAPRIN1-202ENST00000389645 MAGI3Q5TCQ9 1506 aa17.49■□□□□ 0.39
CAPRIN1-202ENST00000389645 PLB1Q6P1J6 1458 aa17.47■□□□□ 0.39
CAPRIN1-202ENST00000389645 NCOA2Q15596 1464 aa17.47■□□□□ 0.39
CAPRIN1-202ENST00000389645 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
CAPRIN1-202ENST00000389645 HECW1Q76N89 1606 aa17.45■□□□□ 0.38
CAPRIN1-202ENST00000389645 FGD6Q6ZV73 1430 aa17.43■□□□□ 0.38
CAPRIN1-202ENST00000389645 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
CAPRIN1-202ENST00000389645 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
CAPRIN1-202ENST00000389645 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
CAPRIN1-202ENST00000389645 CHD1O14646 1710 aa17.42■□□□□ 0.38
CAPRIN1-202ENST00000389645 DHX57Q6P158 1386 aaKnown RBP17.41■□□□□ 0.38
CAPRIN1-202ENST00000389645 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
CAPRIN1-202ENST00000389645 EHBP1L1Q8N3D4 1523 aa17.38■□□□□ 0.37
CAPRIN1-202ENST00000389645 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
CAPRIN1-202ENST00000389645 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
CAPRIN1-202ENST00000389645 RAPGEF6Q8TEU7 1601 aa17.38■□□□□ 0.37
CAPRIN1-202ENST00000389645 HIRIP3Q9BW71 556 aaPredicted RBP17.38■□□□□ 0.37
CAPRIN1-202ENST00000389645 SUPT6HQ7KZ85 1726 aaKnown RBP17.37■□□□□ 0.37
CAPRIN1-202ENST00000389645 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
CAPRIN1-202ENST00000389645 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
CAPRIN1-202ENST00000389645 PTPRKQ15262 1439 aa17.35■□□□□ 0.37
CAPRIN1-202ENST00000389645 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
CAPRIN1-202ENST00000389645 PTPRGP23470 1445 aa17.34■□□□□ 0.37
CAPRIN1-202ENST00000389645 PRKCSHP14314 528 aaPredicted RBP17.34■□□□□ 0.37
CAPRIN1-202ENST00000389645 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
CAPRIN1-202ENST00000389645 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
CAPRIN1-202ENST00000389645 ERCC6L2Q5T890 1561 aa17.3■□□□□ 0.36
CAPRIN1-202ENST00000389645 ZNF777Q9ULD5 760 aaPredicted RBP17.3■□□□□ 0.36
CAPRIN1-202ENST00000389645 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
CAPRIN1-202ENST00000389645 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
CAPRIN1-202ENST00000389645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
CAPRIN1-202ENST00000389645 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
CAPRIN1-202ENST00000389645 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
CAPRIN1-202ENST00000389645 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.36
CAPRIN1-202ENST00000389645 ATP10BO94823 1461 aa17.27■□□□□ 0.35
CAPRIN1-202ENST00000389645 TROQ12816 1431 aaPredicted RBP17.24■□□□□ 0.35
CAPRIN1-202ENST00000389645 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
CAPRIN1-202ENST00000389645 ABCA8O94911 1581 aa17.24■□□□□ 0.35
CAPRIN1-202ENST00000389645 KIF14Q15058 1648 aa17.21■□□□□ 0.35
CAPRIN1-202ENST00000389645 MIA2Q96PC5 1412 aa17.19■□□□□ 0.34
CAPRIN1-202ENST00000389645 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms