RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 WDR43Q15061 677 aaKnown RBP eCLIP10.63□□□□□ -0.71
NCBP3-201ENST00000389005 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
NCBP3-201ENST00000389005 SIN3AQ96ST3 1273 aa10.63□□□□□ -0.71
NCBP3-201ENST00000389005 DDRGK1Q96HY6 314 aa10.61□□□□□ -0.71
NCBP3-201ENST00000389005 GLIPR1L2Q4G1C9 344 aa10.61□□□□□ -0.71
NCBP3-201ENST00000389005 KIF27Q86VH2 1401 aa10.61□□□□□ -0.71
NCBP3-201ENST00000389005 CCNB3Q8WWL7 1395 aa10.61□□□□□ -0.71
NCBP3-201ENST00000389005 SOGA1O94964 1423 aa10.6□□□□□ -0.71
NCBP3-201ENST00000389005 ARXQ96QS3 562 aa10.6□□□□□ -0.71
NCBP3-201ENST00000389005 TSPY4P0CV99 314 aa10.59□□□□□ -0.71
NCBP3-201ENST00000389005 TSPY10P0CW01 314 aa10.59□□□□□ -0.71
NCBP3-201ENST00000389005 NACADO15069 1562 aa10.59□□□□□ -0.71
NCBP3-201ENST00000389005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.719e-8■■■■□ 23.1
NCBP3-201ENST00000389005 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
NCBP3-201ENST00000389005 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
NCBP3-201ENST00000389005 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
NCBP3-201ENST00000389005 NOP58Q9Y2X3 529 aaKnown RBP10.57□□□□□ -0.72
NCBP3-201ENST00000389005 VPS8Q8N3P4 1428 aa10.57□□□□□ -0.72
NCBP3-201ENST00000389005 CCER2I3L3R5 266 aa10.56□□□□□ -0.72
NCBP3-201ENST00000389005 SENP3-EIF4A1A0A087X0R7 540 aa10.56□□□□□ -0.72
NCBP3-201ENST00000389005 CHGAP10645 457 aaKnown RBP10.56□□□□□ -0.72
NCBP3-201ENST00000389005 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
NCBP3-201ENST00000389005 TIMELESSQ9UNS1 1208 aa10.55□□□□□ -0.72
NCBP3-201ENST00000389005 BECN1Q14457 450 aa10.55□□□□□ -0.72
NCBP3-201ENST00000389005 BAZ1BQ9UIG0 1483 aaKnown RBP10.55□□□□□ -0.72
NCBP3-201ENST00000389005 PPM1GO15355 546 aaPredicted RBP10.55□□□□□ -0.72
NCBP3-201ENST00000389005 B4GALNT3Q6L9W6 998 aa10.54□□□□□ -0.72
NCBP3-201ENST00000389005 LAS1LQ9Y4W2 734 aaKnown RBP10.52□□□□□ -0.72
NCBP3-201ENST00000389005 TSHZ2Q9NRE2 1034 aa10.51□□□□□ -0.73
NCBP3-201ENST00000389005 SETD5Q9C0A6 1442 aa10.5□□□□□ -0.73
NCBP3-201ENST00000389005 ABCC8Q09428 1581 aa10.5□□□□□ -0.73
NCBP3-201ENST00000389005 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
NCBP3-201ENST00000389005 CARD11Q9BXL7 1154 aa10.48□□□□□ -0.73
NCBP3-201ENST00000389005 DEKP35659 375 aaKnown RBP10.48□□□□□ -0.73
NCBP3-201ENST00000389005 CCDC88BA6NC98 1476 aa10.48□□□□□ -0.73
NCBP3-201ENST00000389005 KANK4Q5T7N3 995 aaPredicted RBP10.48□□□□□ -0.73
NCBP3-201ENST00000389005 MROH2BQ7Z745 1585 aa10.47□□□□□ -0.73
NCBP3-201ENST00000389005 RGL3Q3MIN7 710 aa10.46□□□□□ -0.73
NCBP3-201ENST00000389005 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.74
NCBP3-201ENST00000389005 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.74
NCBP3-201ENST00000389005 MYH16Q9H6N6 1097 aa10.45□□□□□ -0.74
NCBP3-201ENST00000389005 KNSTRNQ9Y448 316 aa10.45□□□□□ -0.74
NCBP3-201ENST00000389005 CFDP1Q9UEE9 299 aaPredicted RBP10.45□□□□□ -0.74
NCBP3-201ENST00000389005 RAB3GAP2Q9H2M9 1393 aa10.44□□□□□ -0.74
NCBP3-201ENST00000389005 STAG3Q9UJ98 1225 aa10.44□□□□□ -0.74
NCBP3-201ENST00000389005 RGS3P49796 1198 aa10.44□□□□□ -0.74
NCBP3-201ENST00000389005 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
NCBP3-201ENST00000389005 CHMP7Q8WUX9 453 aaPredicted RBP10.43□□□□□ -0.74
NCBP3-201ENST00000389005 TRIM44Q96DX7 344 aaPredicted RBP10.43□□□□□ -0.74
NCBP3-201ENST00000389005 HSPA5P11021 654 aaKnown RBP10.43□□□□□ -0.74
NCBP3-201ENST00000389005 PLEKHD1A6NEE1 506 aa10.43□□□□□ -0.74
NCBP3-201ENST00000389005 GOLGA6L22H0YM25 854 aa10.42□□□□□ -0.74
NCBP3-201ENST00000389005 CARMIL1Q5VZK9 1371 aa10.42□□□□□ -0.74
NCBP3-201ENST00000389005 ARHGAP35Q9NRY4 1499 aa10.4□□□□□ -0.75
NCBP3-201ENST00000389005 CUX2O14529 1486 aa10.39□□□□□ -0.75
NCBP3-201ENST00000389005 PPP1R15AO75807 674 aaPredicted RBP10.38□□□□□ -0.75
NCBP3-201ENST00000389005 CFAP53Q96M91 514 aa10.38□□□□□ -0.75
NCBP3-201ENST00000389005 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
NCBP3-201ENST00000389005 FTSJ3Q8IY81 847 aaKnown RBP10.37□□□□□ -0.75
NCBP3-201ENST00000389005 CC2D1BQ5T0F9 858 aaKnown RBP10.36□□□□□ -0.75
NCBP3-201ENST00000389005 NAP1L5Q96NT1 182 aaPredicted RBP10.36□□□□□ -0.75
NCBP3-201ENST00000389005 DHX57Q6P158 1386 aaKnown RBP10.35□□□□□ -0.75
NCBP3-201ENST00000389005 NEUROD2Q15784 382 aa10.34□□□□□ -0.75
NCBP3-201ENST00000389005 WIZO95785 1651 aa10.34□□□□□ -0.75
NCBP3-201ENST00000389005 FRAT1Q92837 279 aaPredicted RBP10.34□□□□□ -0.75
NCBP3-201ENST00000389005 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
NCBP3-201ENST00000389005 KCNH8Q96L42 1107 aa10.34□□□□□ -0.75
NCBP3-201ENST00000389005 NCLP19338 710 aaKnown RBP10.33□□□□□ -0.76
NCBP3-201ENST00000389005 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
NCBP3-201ENST00000389005 DCAF11Q8TEB1 546 aa10.32□□□□□ -0.76
NCBP3-201ENST00000389005 TCERG1O14776 1098 aaKnown RBP10.32□□□□□ -0.76
NCBP3-201ENST00000389005 RCAN3Q9UKA8 241 aa10.32□□□□□ -0.76
NCBP3-201ENST00000389005 FOXD1Q16676 465 aa10.32□□□□□ -0.76
NCBP3-201ENST00000389005 PTMAP06454 111 aaKnown RBP10.31□□□□□ -0.76
NCBP3-201ENST00000389005 TMF1P82094 1093 aa10.31□□□□□ -0.76
NCBP3-201ENST00000389005 RAPGEF2Q9Y4G8 1499 aa10.3□□□□□ -0.76
NCBP3-201ENST00000389005 IPO9Q96P70 1041 aaKnown RBP10.3□□□□□ -0.76
NCBP3-201ENST00000389005 NUDCQ9Y266 331 aa10.3□□□□□ -0.76
NCBP3-201ENST00000389005 L1TD1Q5T7N2 865 aaKnown RBP10.3□□□□□ -0.76
NCBP3-201ENST00000389005 KTN1Q86UP2 1357 aaKnown RBP10.29□□□□□ -0.76
NCBP3-201ENST00000389005 MS4A1P11836 297 aa10.29□□□□□ -0.76
NCBP3-201ENST00000389005 MPHOSPH9Q99550 1183 aa10.28□□□□□ -0.76
NCBP3-201ENST00000389005 RALBP1Q15311 655 aa10.28□□□□□ -0.76
NCBP3-201ENST00000389005 MAPK8IP3Q9UPT6 1336 aa10.28□□□□□ -0.76
NCBP3-201ENST00000389005 PKD2Q13563 968 aa10.28□□□□□ -0.76
NCBP3-201ENST00000389005 CASC1Q6TDU7 716 aa10.28□□□□□ -0.76
NCBP3-201ENST00000389005 SENP3Q9H4L4 574 aaPredicted RBP10.28□□□□□ -0.76
NCBP3-201ENST00000389005 FMN1Q68DA7 1419 aa10.28□□□□□ -0.76
NCBP3-201ENST00000389005 TNNT2P45379 298 aaPredicted RBP10.27□□□□□ -0.77
NCBP3-201ENST00000389005 EIF4G1Q04637 1599 aaKnown RBP10.27□□□□□ -0.77
NCBP3-201ENST00000389005 HSCBQ8IWL3 235 aa10.26□□□□□ -0.77
NCBP3-201ENST00000389005 HSP90AB1P08238 724 aaKnown RBP10.26□□□□□ -0.77
NCBP3-201ENST00000389005 L3MBTL2Q969R5 705 aa10.25□□□□□ -0.77
NCBP3-201ENST00000389005 CHMP4BQ9H444 224 aaKnown RBP10.25□□□□□ -0.77
NCBP3-201ENST00000389005 RUSC2Q8N2Y8 1516 aa10.25□□□□□ -0.77
NCBP3-201ENST00000389005 DNTTIP2Q5QJE6 756 aaKnown RBP10.24□□□□□ -0.77
NCBP3-201ENST00000389005 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
NCBP3-201ENST00000389005 FANCIQ9NVI1 1328 aa10.23□□□□□ -0.77
NCBP3-201ENST00000389005 PDE3BQ13370 1112 aa10.22□□□□□ -0.77
NCBP3-201ENST00000389005 SLKQ9H2G2 1235 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms