RNA–Protein interactions for RNA: ENST00000382580.6

CHEK2-204, Transcript of checkpoint kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHEK2, Length 1,971 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-204ENST00000382580 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
CHEK2-204ENST00000382580 CLIP1P30622 1438 aa23.56■■□□□ 1.36
CHEK2-204ENST00000382580 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
CHEK2-204ENST00000382580 SYNJ2O15056 1496 aa23.47■■□□□ 1.35
CHEK2-204ENST00000382580 GRIN2AQ12879 1464 aa23.45■■□□□ 1.35
CHEK2-204ENST00000382580 FBLN2P98095 1184 aa23.41■■□□□ 1.34
CHEK2-204ENST00000382580 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
CHEK2-204ENST00000382580 CHD1O14646 1710 aa23.39■■□□□ 1.33
CHEK2-204ENST00000382580 ARHGAP35Q9NRY4 1499 aa23.38■■□□□ 1.33
CHEK2-204ENST00000382580 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
CHEK2-204ENST00000382580 IQGAP2Q13576 1575 aa23.36■■□□□ 1.33
CHEK2-204ENST00000382580 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
CHEK2-204ENST00000382580 EFCAB5A4FU69 1503 aa23.31■■□□□ 1.32
CHEK2-204ENST00000382580 VPS8Q8N3P4 1428 aa23.31■■□□□ 1.32
CHEK2-204ENST00000382580 KIAA0586Q9BVV6 1533 aa23.27■■□□□ 1.32
CHEK2-204ENST00000382580 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
CHEK2-204ENST00000382580 P3H3Q8IVL6 736 aa23.26■■□□□ 1.31
CHEK2-204ENST00000382580 NUP160Q12769 1436 aa23.25■■□□□ 1.31
CHEK2-204ENST00000382580 FHOD3Q2V2M9 1422 aa23.23■■□□□ 1.31
CHEK2-204ENST00000382580 UGGT2Q9NYU1 1516 aa23.19■■□□□ 1.3
CHEK2-204ENST00000382580 KIAA0556O60303 1618 aa23.13■■□□□ 1.29
CHEK2-204ENST00000382580 PCF11O94913 1555 aaKnown RBP23.12■■□□□ 1.29
CHEK2-204ENST00000382580 DISP1Q96F81 1524 aa23.1■■□□□ 1.29
CHEK2-204ENST00000382580 APLP2Q06481 763 aa23.08■■□□□ 1.29
CHEK2-204ENST00000382580 FMN1Q68DA7 1419 aa23.07■■□□□ 1.28
CHEK2-204ENST00000382580 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
CHEK2-204ENST00000382580 JPH4Q96JJ6 628 aa23.05■■□□□ 1.28
CHEK2-204ENST00000382580 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
CHEK2-204ENST00000382580 FYCO1Q9BQS8 1478 aa23.02■■□□□ 1.28
CHEK2-204ENST00000382580 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
CHEK2-204ENST00000382580 CARMIL2Q6F5E8 1435 aa23.01■■□□□ 1.27
CHEK2-204ENST00000382580 ATP1B4Q9UN42 357 aaPredicted RBP23■■□□□ 1.27
CHEK2-204ENST00000382580 CASKIN1Q8WXD9 1431 aa23■■□□□ 1.27
CHEK2-204ENST00000382580 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
CHEK2-204ENST00000382580 PRG4Q92954 1404 aaPredicted RBP22.97■■□□□ 1.27
CHEK2-204ENST00000382580 TIAM1Q13009 1591 aa22.96■■□□□ 1.27
CHEK2-204ENST00000382580 CCER1Q8TC90 406 aaPredicted RBP22.96■■□□□ 1.27
CHEK2-204ENST00000382580 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
CHEK2-204ENST00000382580 HECW1Q76N89 1606 aa22.93■■□□□ 1.26
CHEK2-204ENST00000382580 MAP3K1Q13233 1512 aa22.9■■□□□ 1.26
CHEK2-204ENST00000382580 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.25
CHEK2-204ENST00000382580 RAPGEF6Q8TEU7 1601 aa22.89■■□□□ 1.25
CHEK2-204ENST00000382580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.89■■□□□ 1.25
CHEK2-204ENST00000382580 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
CHEK2-204ENST00000382580 OSCARQ8IYS5 282 aa22.83■■□□□ 1.25
CHEK2-204ENST00000382580 PLB1Q6P1J6 1458 aa22.82■■□□□ 1.24
CHEK2-204ENST00000382580 CCDC18Q5T9S5 1454 aa22.81■■□□□ 1.24
CHEK2-204ENST00000382580 LRRC9Q6ZRR7 1453 aa22.81■■□□□ 1.24
CHEK2-204ENST00000382580 EPRSP07814 1512 aaKnown RBP22.79■■□□□ 1.24
CHEK2-204ENST00000382580 CDK13Q14004 1512 aaKnown RBP22.79■■□□□ 1.24
CHEK2-204ENST00000382580 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
CHEK2-204ENST00000382580 PTPRGP23470 1445 aa22.79■■□□□ 1.24
CHEK2-204ENST00000382580 NUP153P49790 1475 aaKnown RBP22.78■■□□□ 1.24
CHEK2-204ENST00000382580 ABCA8O94911 1581 aa22.78■■□□□ 1.24
CHEK2-204ENST00000382580 MTUS2Q5JR59 1369 aa22.72■■□□□ 1.23
CHEK2-204ENST00000382580 EHBP1L1Q8N3D4 1523 aa22.7■■□□□ 1.22
CHEK2-204ENST00000382580 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
CHEK2-204ENST00000382580 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
CHEK2-204ENST00000382580 SUPT6HQ7KZ85 1726 aaKnown RBP22.67■■□□□ 1.22
CHEK2-204ENST00000382580 UACAQ9BZF9 1416 aa22.66■■□□□ 1.22
CHEK2-204ENST00000382580 ABCC2Q92887 1545 aa22.63■■□□□ 1.21
CHEK2-204ENST00000382580 ATP10BO94823 1461 aa22.59■■□□□ 1.21
CHEK2-204ENST00000382580 PHLDB1Q86UU1 1377 aa22.59■■□□□ 1.21
CHEK2-204ENST00000382580 NCOA2Q15596 1464 aa22.58■■□□□ 1.21
CHEK2-204ENST00000382580 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
CHEK2-204ENST00000382580 CDK11AQ9UQ88 783 aaPredicted RBP22.56■■□□□ 1.2
CHEK2-204ENST00000382580 RRBP1Q9P2E9 1410 aaKnown RBP22.55■■□□□ 1.2
CHEK2-204ENST00000382580 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
CHEK2-204ENST00000382580 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
CHEK2-204ENST00000382580 UHRF1BP1LA0JNW5 1464 aa22.53■■□□□ 1.2
CHEK2-204ENST00000382580 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
CHEK2-204ENST00000382580 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
CHEK2-204ENST00000382580 TROQ12816 1431 aaPredicted RBP22.53■■□□□ 1.2
CHEK2-204ENST00000382580 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
CHEK2-204ENST00000382580 CCNB3Q8WWL7 1395 aa22.51■■□□□ 1.19
CHEK2-204ENST00000382580 KIF14Q15058 1648 aa22.5■■□□□ 1.19
CHEK2-204ENST00000382580 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
CHEK2-204ENST00000382580 MYOM3Q5VTT5 1437 aa22.47■■□□□ 1.19
CHEK2-204ENST00000382580 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
CHEK2-204ENST00000382580 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
CHEK2-204ENST00000382580 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
CHEK2-204ENST00000382580 ACIN1Q9UKV3 1341 aaKnown RBP22.46■■□□□ 1.19
CHEK2-204ENST00000382580 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
CHEK2-204ENST00000382580 KDM5BQ9UGL1 1544 aa22.45■■□□□ 1.18
CHEK2-204ENST00000382580 FGD6Q6ZV73 1430 aa22.45■■□□□ 1.18
CHEK2-204ENST00000382580 CENPBP07199 599 aaPredicted RBP22.43■■□□□ 1.18
CHEK2-204ENST00000382580 FAM50AQ14320 339 aaKnown RBP22.42■■□□□ 1.18
CHEK2-204ENST00000382580 PTPN23Q9H3S7 1636 aa22.41■■□□□ 1.18
CHEK2-204ENST00000382580 ITSN2Q9NZM3 1697 aa22.4■■□□□ 1.18
CHEK2-204ENST00000382580 ITGAEP38570 1179 aa22.38■■□□□ 1.17
CHEK2-204ENST00000382580 CDC42BPAQ5VT25 1732 aa22.36■■□□□ 1.17
CHEK2-204ENST00000382580 CLSPNQ9HAW4 1339 aa22.34■■□□□ 1.17
CHEK2-204ENST00000382580 ABCC10Q5T3U5 1492 aa22.34■■□□□ 1.17
CHEK2-204ENST00000382580 MIA2Q96PC5 1412 aa22.32■■□□□ 1.16
CHEK2-204ENST00000382580 TTC37Q6PGP7 1564 aa22.32■■□□□ 1.16
CHEK2-204ENST00000382580 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
CHEK2-204ENST00000382580 TCOF1Q13428 1488 aaKnown RBP22.3■■□□□ 1.16
CHEK2-204ENST00000382580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.3■■□□□ 1.16
CHEK2-204ENST00000382580 NEUROD1Q13562 356 aa22.29■■□□□ 1.16
CHEK2-204ENST00000382580 KCNH8Q96L42 1107 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms