RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 NUP160Q12769 1436 aa19.99■□□□□ 0.79
APOBEC3F-202ENST00000381565 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
APOBEC3F-202ENST00000381565 ADRA2BP18089 450 aa19.96■□□□□ 0.79
APOBEC3F-202ENST00000381565 CUL7Q14999 1698 aa19.96■□□□□ 0.79
APOBEC3F-202ENST00000381565 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
APOBEC3F-202ENST00000381565 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
APOBEC3F-202ENST00000381565 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
APOBEC3F-202ENST00000381565 IGF1RP08069 1367 aa19.85■□□□□ 0.77
APOBEC3F-202ENST00000381565 KIF13AQ9H1H9 1805 aa19.78■□□□□ 0.76
APOBEC3F-202ENST00000381565 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
APOBEC3F-202ENST00000381565 CARMIL1Q5VZK9 1371 aa19.72■□□□□ 0.75
APOBEC3F-202ENST00000381565 JPH4Q96JJ6 628 aa19.69■□□□□ 0.74
APOBEC3F-202ENST00000381565 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
APOBEC3F-202ENST00000381565 CTTNBP2Q8WZ74 1663 aa19.66■□□□□ 0.74
APOBEC3F-202ENST00000381565 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
APOBEC3F-202ENST00000381565 ABCC10Q5T3U5 1492 aa19.64■□□□□ 0.73
APOBEC3F-202ENST00000381565 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
APOBEC3F-202ENST00000381565 IQGAP2Q13576 1575 aa19.63■□□□□ 0.73
APOBEC3F-202ENST00000381565 MAPKBP1O60336 1514 aa19.63■□□□□ 0.73
APOBEC3F-202ENST00000381565 DIP2BQ9P265 1576 aa19.61■□□□□ 0.73
APOBEC3F-202ENST00000381565 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
APOBEC3F-202ENST00000381565 FAM69CQ0P6D2 419 aa19.57■□□□□ 0.72
APOBEC3F-202ENST00000381565 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
APOBEC3F-202ENST00000381565 EEA1Q15075 1411 aa19.51■□□□□ 0.71
APOBEC3F-202ENST00000381565 DISP1Q96F81 1524 aa19.49■□□□□ 0.71
APOBEC3F-202ENST00000381565 KIAA0556O60303 1618 aa19.48■□□□□ 0.71
APOBEC3F-202ENST00000381565 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
APOBEC3F-202ENST00000381565 PIAS4Q8N2W9 510 aaPredicted RBP19.46■□□□□ 0.71
APOBEC3F-202ENST00000381565 KDM6BO15054 1643 aa19.45■□□□□ 0.7
APOBEC3F-202ENST00000381565 KIF21BO75037 1637 aa19.45■□□□□ 0.7
APOBEC3F-202ENST00000381565 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
APOBEC3F-202ENST00000381565 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
APOBEC3F-202ENST00000381565 TSPOAP1O95153 1857 aa19.4■□□□□ 0.7
APOBEC3F-202ENST00000381565 KDM4FA0A1W2PPD8 638 aa19.4■□□□□ 0.7
APOBEC3F-202ENST00000381565 PTPRGP23470 1445 aa19.4■□□□□ 0.7
APOBEC3F-202ENST00000381565 ABCC2Q92887 1545 aa19.37■□□□□ 0.69
APOBEC3F-202ENST00000381565 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
APOBEC3F-202ENST00000381565 PPRC1Q5VV67 1664 aaKnown RBP19.35■□□□□ 0.69
APOBEC3F-202ENST00000381565 SAMD9Q5K651 1589 aa19.35■□□□□ 0.69
APOBEC3F-202ENST00000381565 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
APOBEC3F-202ENST00000381565 ASXL2Q76L83 1435 aa19.33■□□□□ 0.68
APOBEC3F-202ENST00000381565 UHRF1BP1LA0JNW5 1464 aa19.32■□□□□ 0.68
APOBEC3F-202ENST00000381565 GLI2P10070 1586 aa19.32■□□□□ 0.68
APOBEC3F-202ENST00000381565 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
APOBEC3F-202ENST00000381565 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
APOBEC3F-202ENST00000381565 PLB1Q6P1J6 1458 aa19.28■□□□□ 0.68
APOBEC3F-202ENST00000381565 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
APOBEC3F-202ENST00000381565 ZCCHC11Q5TAX3 1644 aaKnown RBP19.25■□□□□ 0.67
APOBEC3F-202ENST00000381565 ABCA8O94911 1581 aa19.25■□□□□ 0.67
APOBEC3F-202ENST00000381565 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
APOBEC3F-202ENST00000381565 KDM5BQ9UGL1 1544 aa19.24■□□□□ 0.67
APOBEC3F-202ENST00000381565 EPRSP07814 1512 aaKnown RBP19.22■□□□□ 0.67
APOBEC3F-202ENST00000381565 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
APOBEC3F-202ENST00000381565 ADGRL1O94910 1474 aa19.19■□□□□ 0.66
APOBEC3F-202ENST00000381565 EFCAB5A4FU69 1503 aa19.17■□□□□ 0.66
APOBEC3F-202ENST00000381565 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.66
APOBEC3F-202ENST00000381565 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
APOBEC3F-202ENST00000381565 TEX14Q8IWB6 1497 aa19.1■□□□□ 0.65
APOBEC3F-202ENST00000381565 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
APOBEC3F-202ENST00000381565 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
APOBEC3F-202ENST00000381565 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
APOBEC3F-202ENST00000381565 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
APOBEC3F-202ENST00000381565 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
APOBEC3F-202ENST00000381565 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
APOBEC3F-202ENST00000381565 ILDR1Q86SU0 546 aaPredicted RBP19.03■□□□□ 0.64
APOBEC3F-202ENST00000381565 NUP153P49790 1475 aaKnown RBP19.03■□□□□ 0.64
APOBEC3F-202ENST00000381565 HECW2Q9P2P5 1572 aa19.02■□□□□ 0.63
APOBEC3F-202ENST00000381565 MAGI3Q5TCQ9 1506 aa19.01■□□□□ 0.63
APOBEC3F-202ENST00000381565 ATP10BO94823 1461 aa19.01■□□□□ 0.63
APOBEC3F-202ENST00000381565 LRRIQ1Q96JM4 1722 aa19■□□□□ 0.63
APOBEC3F-202ENST00000381565 CFAP43Q8NDM7 1665 aa19■□□□□ 0.63
APOBEC3F-202ENST00000381565 CD109Q6YHK3 1445 aa18.98■□□□□ 0.63
APOBEC3F-202ENST00000381565 MSH5O43196 834 aa18.97■□□□□ 0.63
APOBEC3F-202ENST00000381565 HECW1Q76N89 1606 aa18.95■□□□□ 0.62
APOBEC3F-202ENST00000381565 ABCA9Q8IUA7 1624 aa18.92■□□□□ 0.62
APOBEC3F-202ENST00000381565 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
APOBEC3F-202ENST00000381565 CDK13Q14004 1512 aaKnown RBP18.91■□□□□ 0.62
APOBEC3F-202ENST00000381565 PCF11O94913 1555 aaKnown RBP18.91■□□□□ 0.62
APOBEC3F-202ENST00000381565 KCNH8Q96L42 1107 aa18.91■□□□□ 0.62
APOBEC3F-202ENST00000381565 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
APOBEC3F-202ENST00000381565 ARAP3Q8WWN8 1544 aa18.87■□□□□ 0.61
APOBEC3F-202ENST00000381565 CLIP1P30622 1438 aa18.85■□□□□ 0.61
APOBEC3F-202ENST00000381565 TTC37Q6PGP7 1564 aa18.82■□□□□ 0.6
APOBEC3F-202ENST00000381565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
APOBEC3F-202ENST00000381565 CASKIN1Q8WXD9 1431 aa18.78■□□□□ 0.6
APOBEC3F-202ENST00000381565 KIF14Q15058 1648 aa18.78■□□□□ 0.6
APOBEC3F-202ENST00000381565 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.6
APOBEC3F-202ENST00000381565 CEP162Q5TB80 1403 aa18.77■□□□□ 0.6
APOBEC3F-202ENST00000381565 FRMPD1Q5SYB0 1578 aa18.76■□□□□ 0.59
APOBEC3F-202ENST00000381565 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
APOBEC3F-202ENST00000381565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
APOBEC3F-202ENST00000381565 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
APOBEC3F-202ENST00000381565 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
APOBEC3F-202ENST00000381565 PTPRMP28827 1452 aa18.73■□□□□ 0.59
APOBEC3F-202ENST00000381565 CCDC18Q5T9S5 1454 aa18.73■□□□□ 0.59
APOBEC3F-202ENST00000381565 NEO1Q92859 1461 aa18.73■□□□□ 0.59
APOBEC3F-202ENST00000381565 PHLDB1Q86UU1 1377 aa18.73■□□□□ 0.59
APOBEC3F-202ENST00000381565 RAPGEF3O95398 923 aa18.72■□□□□ 0.59
APOBEC3F-202ENST00000381565 PLEKHD1A6NEE1 506 aa18.7■□□□□ 0.58
APOBEC3F-202ENST00000381565 CFAP74Q9C0B2 1584 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms