RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 KANK4Q5T7N3 995 aaPredicted RBP26.18■■□□□ 1.78
SMARCD1-201ENST00000381513 ZBTB47Q9UFB7 747 aaPredicted RBP26.18■■□□□ 1.78
SMARCD1-201ENST00000381513 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
SMARCD1-201ENST00000381513 NACADO15069 1562 aa26.09■■□□□ 1.77
SMARCD1-201ENST00000381513 IPO9Q96P70 1041 aaKnown RBP26.07■■□□□ 1.76
SMARCD1-201ENST00000381513 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
SMARCD1-201ENST00000381513 RAB3GAP2Q9H2M9 1393 aa26.02■■□□□ 1.76
SMARCD1-201ENST00000381513 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
SMARCD1-201ENST00000381513 LAS1LQ9Y4W2 734 aaKnown RBP25.97■■□□□ 1.75
SMARCD1-201ENST00000381513 NPM2Q86SE8 214 aaKnown RBP25.96■■□□□ 1.75
SMARCD1-201ENST00000381513 CCNB3Q8WWL7 1395 aa25.96■■□□□ 1.75
SMARCD1-201ENST00000381513 KIF21BO75037 1637 aa25.96■■□□□ 1.75
SMARCD1-201ENST00000381513 NEFMP07197 916 aa25.95■■□□□ 1.74
SMARCD1-201ENST00000381513 RAPGEF2Q9Y4G8 1499 aa25.92■■□□□ 1.74
SMARCD1-201ENST00000381513 FAM9BQ8IZU0 186 aa25.89■■□□□ 1.74
SMARCD1-201ENST00000381513 MAPKBP1O60336 1514 aa25.86■■□□□ 1.73
SMARCD1-201ENST00000381513 RRBP1Q9P2E9 1410 aaKnown RBP25.86■■□□□ 1.73
SMARCD1-201ENST00000381513 BRPF3Q9ULD4 1205 aa25.84■■□□□ 1.73
SMARCD1-201ENST00000381513 BAZ1BQ9UIG0 1483 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-201ENST00000381513 FAM50AQ14320 339 aaKnown RBP25.79■■□□□ 1.72
SMARCD1-201ENST00000381513 CUX2O14529 1486 aa25.78■■□□□ 1.72
SMARCD1-201ENST00000381513 WASHC2AQ641Q2 1341 aa25.78■■□□□ 1.72
SMARCD1-201ENST00000381513 TOP2AP11388 1531 aaKnown RBP25.76■■□□□ 1.71
SMARCD1-201ENST00000381513 PKNOX2Q96KN3 472 aa25.75■■□□□ 1.71
SMARCD1-201ENST00000381513 SETD5Q9C0A6 1442 aa25.74■■□□□ 1.71
SMARCD1-201ENST00000381513 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
SMARCD1-201ENST00000381513 TIMELESSQ9UNS1 1208 aa25.73■■□□□ 1.71
SMARCD1-201ENST00000381513 CCDC184Q52MB2 194 aa25.72■■□□□ 1.71
SMARCD1-201ENST00000381513 TONSLQ96HA7 1378 aa25.71■■□□□ 1.71
SMARCD1-201ENST00000381513 MRS2Q9HD23 443 aa25.69■■□□□ 1.7
SMARCD1-201ENST00000381513 USP35Q9P2H5 1018 aa25.69■■□□□ 1.7
SMARCD1-201ENST00000381513 C11orf95C9JLR9 678 aaPredicted RBP25.67■■□□□ 1.7
SMARCD1-201ENST00000381513 PPM1GO15355 546 aaPredicted RBP25.62■■□□□ 1.69
SMARCD1-201ENST00000381513 WASHC2CQ9Y4E1 1318 aa25.62■■□□□ 1.69
SMARCD1-201ENST00000381513 ARAP1Q96P48 1450 aa25.61■■□□□ 1.69
SMARCD1-201ENST00000381513 CNGB1Q14028 1251 aaPredicted RBP25.61■■□□□ 1.69
SMARCD1-201ENST00000381513 SENP3-EIF4A1A0A087X0R7 540 aa25.59■■□□□ 1.69
SMARCD1-201ENST00000381513 ZBED9Q6R2W3 1325 aa25.58■■□□□ 1.69
SMARCD1-201ENST00000381513 GSE1Q14687 1217 aa25.58■■□□□ 1.69
SMARCD1-201ENST00000381513 AKNAQ7Z591 1439 aa25.52■■□□□ 1.68
SMARCD1-201ENST00000381513 RSPH6AQ9H0K4 717 aa25.51■■□□□ 1.67
SMARCD1-201ENST00000381513 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
SMARCD1-201ENST00000381513 ATP1B4Q9UN42 357 aaPredicted RBP25.48■■□□□ 1.67
SMARCD1-201ENST00000381513 GLIPR1L2Q4G1C9 344 aa25.46■■□□□ 1.67
SMARCD1-201ENST00000381513 FRAT1Q92837 279 aaPredicted RBP25.46■■□□□ 1.67
SMARCD1-201ENST00000381513 HSPA5P11021 654 aaKnown RBP25.46■■□□□ 1.67
SMARCD1-201ENST00000381513 PRKRIP1Q9H875 184 aaPredicted RBP25.44■■□□□ 1.66
SMARCD1-201ENST00000381513 PDE4AP27815 886 aa25.44■■□□□ 1.66
SMARCD1-201ENST00000381513 DAXXQ9UER7 740 aaPredicted RBP25.42■■□□□ 1.66
SMARCD1-201ENST00000381513 VSIG10Q8N0Z9 540 aa25.4■■□□□ 1.66
SMARCD1-201ENST00000381513 NFKBIBQ15653 356 aa25.39■■□□□ 1.65
SMARCD1-201ENST00000381513 NUDCQ9Y266 331 aa25.39■■□□□ 1.65
SMARCD1-201ENST00000381513 TCERG1O14776 1098 aaKnown RBP25.35■■□□□ 1.65
SMARCD1-201ENST00000381513 SLC4A3P48751 1232 aa25.35■■□□□ 1.65
SMARCD1-201ENST00000381513 EIF4G2P78344 907 aaKnown RBP eCLIP25.35■■□□□ 1.65
SMARCD1-201ENST00000381513 PHLDB1Q86UU1 1377 aa25.32■■□□□ 1.64
SMARCD1-201ENST00000381513 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
SMARCD1-201ENST00000381513 BACH2Q9BYV9 841 aa25.29■■□□□ 1.64
SMARCD1-201ENST00000381513 DDRGK1Q96HY6 314 aa25.29■■□□□ 1.64
SMARCD1-201ENST00000381513 ZMYND15Q9H091 742 aa25.29■■□□□ 1.64
SMARCD1-201ENST00000381513 FAM43AQ8N2R8 423 aa25.29■■□□□ 1.64
SMARCD1-201ENST00000381513 SMG6Q86US8 1419 aaKnown RBP25.27■■□□□ 1.64
SMARCD1-201ENST00000381513 CNTLNQ9NXG0 1405 aa25.27■■□□□ 1.64
SMARCD1-201ENST00000381513 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
SMARCD1-201ENST00000381513 POLR3GLQ9BT43 218 aa25.25■■□□□ 1.63
SMARCD1-201ENST00000381513 EXOC6Q8TAG9 804 aa25.24■■□□□ 1.63
SMARCD1-201ENST00000381513 ARHGAP35Q9NRY4 1499 aa25.19■■□□□ 1.62
SMARCD1-201ENST00000381513 PRXQ9BXM0 1461 aa25.19■■□□□ 1.62
SMARCD1-201ENST00000381513 DCAF11Q8TEB1 546 aa25.18■■□□□ 1.62
SMARCD1-201ENST00000381513 RNF123Q5XPI4 1314 aa25.18■■□□□ 1.62
SMARCD1-201ENST00000381513 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
SMARCD1-201ENST00000381513 FRAT2O75474 233 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-201ENST00000381513 P3H3Q8IVL6 736 aa25.15■■□□□ 1.62
SMARCD1-201ENST00000381513 SKAP1Q86WV1 359 aa25.14■■□□□ 1.62
SMARCD1-201ENST00000381513 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.62
SMARCD1-201ENST00000381513 MS4A1P11836 297 aa25.14■■□□□ 1.61
SMARCD1-201ENST00000381513 NAP1L5Q96NT1 182 aaPredicted RBP25.14■■□□□ 1.61
SMARCD1-201ENST00000381513 CCDC7Q96M83 1385 aa25.11■■□□□ 1.61
SMARCD1-201ENST00000381513 ARXQ96QS3 562 aa25.1■■□□□ 1.61
SMARCD1-201ENST00000381513 LRRC9Q6ZRR7 1453 aa25.09■■□□□ 1.61
SMARCD1-201ENST00000381513 HSP90AA2PQ14568 343 aaPredicted RBP25.08■■□□□ 1.61
SMARCD1-201ENST00000381513 PODXL2Q9NZ53 605 aa25.08■■□□□ 1.61
SMARCD1-201ENST00000381513 RRP1P56182 461 aaKnown RBP25.08■■□□□ 1.61
SMARCD1-201ENST00000381513 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
SMARCD1-201ENST00000381513 PLEKHG5O94827 1062 aa25.05■■□□□ 1.6
SMARCD1-201ENST00000381513 TIAM1Q13009 1591 aa25.05■■□□□ 1.6
SMARCD1-201ENST00000381513 CCDC18Q5T9S5 1454 aa25.04■■□□□ 1.6
SMARCD1-201ENST00000381513 RRAGDQ9NQL2 400 aaPredicted RBP25.04■■□□□ 1.6
SMARCD1-201ENST00000381513 TMC1Q8TDI8 760 aa25.03■■□□□ 1.6
SMARCD1-201ENST00000381513 NCOA2Q15596 1464 aa25.02■■□□□ 1.6
SMARCD1-201ENST00000381513 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
SMARCD1-201ENST00000381513 RCAN3Q9UKA8 241 aa25■■□□□ 1.59
SMARCD1-201ENST00000381513 UACAQ9BZF9 1416 aa24.99■■□□□ 1.59
SMARCD1-201ENST00000381513 HSP90AA1P07900 732 aaKnown RBP24.99■■□□□ 1.59
SMARCD1-201ENST00000381513 KIF7Q2M1P5 1343 aa24.98■■□□□ 1.59
SMARCD1-201ENST00000381513 L3MBTL2Q969R5 705 aa24.96■■□□□ 1.59
SMARCD1-201ENST00000381513 PNNQ9H307 717 aaKnown RBP24.96■■□□□ 1.59
SMARCD1-201ENST00000381513 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
SMARCD1-201ENST00000381513 NCOA1Q15788 1441 aa24.93■■□□□ 1.58
SMARCD1-201ENST00000381513 POGKQ9P215 609 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms