RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 HAP1P54257 671 aaPredicted RBP7.96□□□□□ -1.13
GEN1-202ENST00000381254 FBXO41Q8TF61 875 aa7.96□□□□□ -1.14
GEN1-202ENST00000381254 ZNF777Q9ULD5 760 aaPredicted RBP7.95□□□□□ -1.14
GEN1-202ENST00000381254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.95□□□□□ -1.148e-13■■■■□ 21.9
GEN1-202ENST00000381254 YTHDC1Q96MU7 727 aaKnown RBP7.94□□□□□ -1.14
GEN1-202ENST00000381254 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
GEN1-202ENST00000381254 ERICH6Q7L0X2 663 aa7.94□□□□□ -1.14
GEN1-202ENST00000381254 TEX14Q8IWB6 1497 aa7.94□□□□□ -1.14
GEN1-202ENST00000381254 P3H3Q8IVL6 736 aa7.93□□□□□ -1.14
GEN1-202ENST00000381254 PPP1R15AO75807 674 aaPredicted RBP7.93□□□□□ -1.14
GEN1-202ENST00000381254 HDGFP51858 240 aaKnown RBP7.93□□□□□ -1.14
GEN1-202ENST00000381254 ILDR1Q86SU0 546 aaPredicted RBP7.92□□□□□ -1.14
GEN1-202ENST00000381254 SNAPC4Q5SXM2 1469 aa7.92□□□□□ -1.14
GEN1-202ENST00000381254 A0A0G2JS52 829 aa7.91□□□□□ -1.14
GEN1-202ENST00000381254 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
GEN1-202ENST00000381254 ARHGEF11O15085 1522 aa7.91□□□□□ -1.14
GEN1-202ENST00000381254 WDR62O43379 1518 aa7.9□□□□□ -1.14
GEN1-202ENST00000381254 PRG4Q92954 1404 aaPredicted RBP7.9□□□□□ -1.14
GEN1-202ENST00000381254 KIF27Q86VH2 1401 aa7.9□□□□□ -1.15
GEN1-202ENST00000381254 MAGI1Q96QZ7 1491 aaPredicted RBP7.9□□□□□ -1.15
GEN1-202ENST00000381254 PIP4K2BP78356 416 aa7.89□□□□□ -1.15
GEN1-202ENST00000381254 UBAP1LF5GYI3 381 aa7.89□□□□□ -1.15
GEN1-202ENST00000381254 TOM1O60784 492 aa7.89□□□□□ -1.15
GEN1-202ENST00000381254 CFTRP13569 1480 aa7.88□□□□□ -1.15
GEN1-202ENST00000381254 SYNJ2O15056 1496 aa7.88□□□□□ -1.15
GEN1-202ENST00000381254 TOP2AP11388 1531 aaKnown RBP7.87□□□□□ -1.15
GEN1-202ENST00000381254 EID1Q9Y6B2 187 aa7.86□□□□□ -1.15
GEN1-202ENST00000381254 EEA1Q15075 1411 aa7.86□□□□□ -1.15
GEN1-202ENST00000381254 TOPBP1Q92547 1522 aa7.85□□□□□ -1.15
GEN1-202ENST00000381254 FHAD1B1AJZ9 1412 aa7.85□□□□□ -1.15
GEN1-202ENST00000381254 TNIKQ9UKE5 1360 aa7.84□□□□□ -1.15
GEN1-202ENST00000381254 EFCAB2Q5VUJ9 269 aa7.84□□□□□ -1.15
GEN1-202ENST00000381254 LMTK3Q96Q04 1460 aa7.84□□□□□ -1.15
GEN1-202ENST00000381254 CHGAP10645 457 aaKnown RBP7.83□□□□□ -1.16
GEN1-202ENST00000381254 PLB1Q6P1J6 1458 aa7.83□□□□□ -1.16
GEN1-202ENST00000381254 DNMBPQ6XZF7 1577 aa7.82□□□□□ -1.16
GEN1-202ENST00000381254 KIF21AQ7Z4S6 1674 aa7.82□□□□□ -1.16
GEN1-202ENST00000381254 GOLGA3Q08378 1498 aa7.82□□□□□ -1.16
GEN1-202ENST00000381254 TSPY4P0CV99 314 aa7.81□□□□□ -1.16
GEN1-202ENST00000381254 TSPY10P0CW01 314 aa7.81□□□□□ -1.16
GEN1-202ENST00000381254 RIMBP3CA6NJZ7 1639 aa7.81□□□□□ -1.16
GEN1-202ENST00000381254 RIMBP3BA6NNM3 1639 aa7.81□□□□□ -1.16
GEN1-202ENST00000381254 RIMBP3Q9UFD9 1639 aa7.81□□□□□ -1.16
GEN1-202ENST00000381254 CLIP1P30622 1438 aa7.8□□□□□ -1.16
GEN1-202ENST00000381254 RAD54L2Q9Y4B4 1467 aa7.8□□□□□ -1.16
GEN1-202ENST00000381254 FGD5Q6ZNL6 1462 aa7.79□□□□□ -1.16
GEN1-202ENST00000381254 CCDC88BA6NC98 1476 aa7.79□□□□□ -1.16
GEN1-202ENST00000381254 THOC2Q8NI27 1593 aaKnown RBP7.79□□□□□ -1.16
GEN1-202ENST00000381254 CARMIL1Q5VZK9 1371 aa7.78□□□□□ -1.16
GEN1-202ENST00000381254 CERKQ8TCT0 537 aa7.78□□□□□ -1.16
GEN1-202ENST00000381254 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
GEN1-202ENST00000381254 URB2Q14146 1524 aaKnown RBP7.76□□□□□ -1.17
GEN1-202ENST00000381254 PHLDB1Q86UU1 1377 aa7.76□□□□□ -1.17
GEN1-202ENST00000381254 ZNF608Q9ULD9 1512 aaPredicted RBP7.75□□□□□ -1.17
GEN1-202ENST00000381254 AKNAQ7Z591 1439 aa7.74□□□□□ -1.17
GEN1-202ENST00000381254 GGT6Q6P531 493 aa7.74□□□□□ -1.17
GEN1-202ENST00000381254 KDM6BO15054 1643 aa7.74□□□□□ -1.17
GEN1-202ENST00000381254 TOP2BQ02880 1626 aa7.73□□□□□ -1.17
GEN1-202ENST00000381254 CD109Q6YHK3 1445 aa7.73□□□□□ -1.17
GEN1-202ENST00000381254 WIZO95785 1651 aa7.73□□□□□ -1.17
GEN1-202ENST00000381254 NUTM2BA6NNL0 878 aaPredicted RBP7.72□□□□□ -1.17
GEN1-202ENST00000381254 NUTM2EB1AL46 878 aaPredicted RBP7.72□□□□□ -1.17
GEN1-202ENST00000381254 NUTM2DQ5VT03 806 aaPredicted RBP7.72□□□□□ -1.17
GEN1-202ENST00000381254 NUTM2AQ8IVF1 878 aaPredicted RBP7.72□□□□□ -1.17
GEN1-202ENST00000381254 POLA1P09884 1462 aaPredicted RBP7.72□□□□□ -1.17
GEN1-202ENST00000381254 PPP6R1Q9UPN7 881 aa7.71□□□□□ -1.17
GEN1-202ENST00000381254 KANK1Q14678 1352 aa7.71□□□□□ -1.18
GEN1-202ENST00000381254 ARAP1Q96P48 1450 aa7.71□□□□□ -1.18
GEN1-202ENST00000381254 ANKLE2Q86XL3 938 aa7.71□□□□□ -1.18
GEN1-202ENST00000381254 CSRNP3Q8WYN3 585 aa7.7□□□□□ -1.18
GEN1-202ENST00000381254 THEMISQ8N1K5 641 aaPredicted RBP7.7□□□□□ -1.18
GEN1-202ENST00000381254 PPP1R1BQ9UD71 204 aaPredicted RBP7.69□□□□□ -1.18
GEN1-202ENST00000381254 DAXXQ9UER7 740 aaPredicted RBP7.69□□□□□ -1.18
GEN1-202ENST00000381254 GRIN2AQ12879 1464 aa7.69□□□□□ -1.18
GEN1-202ENST00000381254 ATF3P18847 181 aa7.69□□□□□ -1.18
GEN1-202ENST00000381254 UACAQ9BZF9 1416 aa7.68□□□□□ -1.18
GEN1-202ENST00000381254 SOCS7O14512 581 aa7.68□□□□□ -1.18
GEN1-202ENST00000381254 ZNF326Q5BKZ1 582 aaKnown RBP7.68□□□□□ -1.18
GEN1-202ENST00000381254 EIF4G3O43432 1585 aaKnown RBP7.68□□□□□ -1.18
GEN1-202ENST00000381254 HSPA2P54652 639 aa7.68□□□□□ -1.18
GEN1-202ENST00000381254 FANCAO15360 1455 aa7.67□□□□□ -1.18
GEN1-202ENST00000381254 CFDP1Q9UEE9 299 aaPredicted RBP7.67□□□□□ -1.18
GEN1-202ENST00000381254 UHRF1BP1Q6BDS2 1440 aa7.67□□□□□ -1.18
GEN1-202ENST00000381254 DIEXFQ68CQ4 756 aaKnown RBP7.66□□□□□ -1.18
GEN1-202ENST00000381254 WDR97A6NE52 1622 aa7.66□□□□□ -1.18
GEN1-202ENST00000381254 PEG3Q9GZU2 1588 aa7.66□□□□□ -1.18
GEN1-202ENST00000381254 SLC4A1APQ9BWU0 796 aaKnown RBP7.65□□□□□ -1.18
GEN1-202ENST00000381254 SPAG9O60271 1321 aaKnown RBP7.65□□□□□ -1.18
GEN1-202ENST00000381254 LMOD2Q6P5Q4 547 aa7.65□□□□□ -1.18
GEN1-202ENST00000381254 ZRANB1Q9UGI0 708 aa7.65□□□□□ -1.19
GEN1-202ENST00000381254 PKD2Q13563 968 aa7.64□□□□□ -1.19
GEN1-202ENST00000381254 ZNF316A6NFI3 1004 aaPredicted RBP7.64□□□□□ -1.19
GEN1-202ENST00000381254 WASHC2CQ9Y4E1 1318 aa7.64□□□□□ -1.19
GEN1-202ENST00000381254 NGLY1Q96IV0 654 aa7.64□□□□□ -1.19
GEN1-202ENST00000381254 ASXL2Q76L83 1435 aa7.63□□□□□ -1.19
GEN1-202ENST00000381254 PROSER2Q86WR7 435 aaPredicted RBP7.63□□□□□ -1.19
GEN1-202ENST00000381254 TIMELESSQ9UNS1 1208 aa7.62□□□□□ -1.19
GEN1-202ENST00000381254 MTUS2Q5JR59 1369 aa7.62□□□□□ -1.19
GEN1-202ENST00000381254 ADGRL1O94910 1474 aa7.62□□□□□ -1.19
GEN1-202ENST00000381254 KIAA0586Q9BVV6 1533 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms