RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 KIAA0586Q9BVV6 1533 aa24.95■■□□□ 1.58
VCX3B-201ENST00000381029 ARAP1Q96P48 1450 aa24.95■■□□□ 1.58
VCX3B-201ENST00000381029 EEA1Q15075 1411 aa24.93■■□□□ 1.58
VCX3B-201ENST00000381029 ERCC6L2Q5T890 1561 aa24.91■■□□□ 1.58
VCX3B-201ENST00000381029 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.58
VCX3B-201ENST00000381029 JPH4Q96JJ6 628 aa24.87■■□□□ 1.57
VCX3B-201ENST00000381029 PRG4Q92954 1404 aaPredicted RBP24.83■■□□□ 1.57
VCX3B-201ENST00000381029 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
VCX3B-201ENST00000381029 IQGAP2Q13576 1575 aa24.78■■□□□ 1.56
VCX3B-201ENST00000381029 FAM9AQ8IZU1 332 aaPredicted RBP24.73■■□□□ 1.55
VCX3B-201ENST00000381029 UGGT2Q9NYU1 1516 aa24.71■■□□□ 1.55
VCX3B-201ENST00000381029 KIF21BO75037 1637 aa24.68■■□□□ 1.54
VCX3B-201ENST00000381029 DISP1Q96F81 1524 aa24.68■■□□□ 1.54
VCX3B-201ENST00000381029 CTTNBP2Q8WZ74 1663 aa24.67■■□□□ 1.54
VCX3B-201ENST00000381029 CARMIL2Q6F5E8 1435 aa24.59■■□□□ 1.53
VCX3B-201ENST00000381029 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
VCX3B-201ENST00000381029 KIAA0556O60303 1618 aa24.56■■□□□ 1.52
VCX3B-201ENST00000381029 PTPRGP23470 1445 aa24.52■■□□□ 1.52
VCX3B-201ENST00000381029 GOLGA3Q08378 1498 aa24.51■■□□□ 1.51
VCX3B-201ENST00000381029 ADCY10Q96PN6 1610 aa24.46■■□□□ 1.51
VCX3B-201ENST00000381029 SAMD9Q5K651 1589 aa24.46■■□□□ 1.51
VCX3B-201ENST00000381029 UHRF1BP1LA0JNW5 1464 aa24.4■■□□□ 1.5
VCX3B-201ENST00000381029 UACAQ9BZF9 1416 aa24.38■■□□□ 1.49
VCX3B-201ENST00000381029 ABCC2Q92887 1545 aa24.35■■□□□ 1.49
VCX3B-201ENST00000381029 UBTFP17480 764 aaKnown RBP24.35■■□□□ 1.49
VCX3B-201ENST00000381029 EHMT2Q96KQ7 1210 aa24.35■■□□□ 1.49
VCX3B-201ENST00000381029 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
VCX3B-201ENST00000381029 ABCA8O94911 1581 aa24.33■■□□□ 1.48
VCX3B-201ENST00000381029 PLB1Q6P1J6 1458 aa24.32■■□□□ 1.48
VCX3B-201ENST00000381029 EFCAB5A4FU69 1503 aa24.31■■□□□ 1.48
VCX3B-201ENST00000381029 P3H3Q8IVL6 736 aa24.31■■□□□ 1.48
VCX3B-201ENST00000381029 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
VCX3B-201ENST00000381029 KDM5BQ9UGL1 1544 aa24.3■■□□□ 1.48
VCX3B-201ENST00000381029 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
VCX3B-201ENST00000381029 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
VCX3B-201ENST00000381029 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
VCX3B-201ENST00000381029 NPM1P06748 294 aaKnown RBP eCLIP24.21■■□□□ 1.47
VCX3B-201ENST00000381029 TRHP20396 242 aaPredicted RBP24.18■■□□□ 1.46
VCX3B-201ENST00000381029 ABCC10Q5T3U5 1492 aa24.18■■□□□ 1.46
VCX3B-201ENST00000381029 ZCCHC11Q5TAX3 1644 aaKnown RBP24.17■■□□□ 1.46
VCX3B-201ENST00000381029 ASXL2Q76L83 1435 aa24.15■■□□□ 1.46
VCX3B-201ENST00000381029 RAPGEF6Q8TEU7 1601 aa24.14■■□□□ 1.46
VCX3B-201ENST00000381029 NUP153P49790 1475 aaKnown RBP24.13■■□□□ 1.45
VCX3B-201ENST00000381029 DIP2BQ9P265 1576 aa24.13■■□□□ 1.45
VCX3B-201ENST00000381029 KIF13AQ9H1H9 1805 aa24.13■■□□□ 1.45
VCX3B-201ENST00000381029 ATP10BO94823 1461 aa24.13■■□□□ 1.45
VCX3B-201ENST00000381029 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
VCX3B-201ENST00000381029 CLIP1P30622 1438 aa24.08■■□□□ 1.44
VCX3B-201ENST00000381029 FMN1Q68DA7 1419 aa24.07■■□□□ 1.44
VCX3B-201ENST00000381029 WDR7Q9Y4E6 1490 aa24.05■■□□□ 1.44
VCX3B-201ENST00000381029 FAM69CQ0P6D2 419 aa24.04■■□□□ 1.44
VCX3B-201ENST00000381029 EPRSP07814 1512 aaKnown RBP24.04■■□□□ 1.44
VCX3B-201ENST00000381029 GLI2P10070 1586 aa24.03■■□□□ 1.44
VCX3B-201ENST00000381029 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
VCX3B-201ENST00000381029 ARID3CA6NKF2 412 aa23.99■■□□□ 1.43
VCX3B-201ENST00000381029 CASKIN1Q8WXD9 1431 aa23.94■■□□□ 1.42
VCX3B-201ENST00000381029 CDK13Q14004 1512 aaKnown RBP23.93■■□□□ 1.42
VCX3B-201ENST00000381029 HECW1Q76N89 1606 aa23.92■■□□□ 1.42
VCX3B-201ENST00000381029 PCF11O94913 1555 aaKnown RBP23.92■■□□□ 1.42
VCX3B-201ENST00000381029 MAP3K4Q9Y6R4 1608 aa23.91■■□□□ 1.42
VCX3B-201ENST00000381029 PPRC1Q5VV67 1664 aaKnown RBP23.89■■□□□ 1.41
VCX3B-201ENST00000381029 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
VCX3B-201ENST00000381029 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
VCX3B-201ENST00000381029 KCNH8Q96L42 1107 aa23.84■■□□□ 1.41
VCX3B-201ENST00000381029 ABCA9Q8IUA7 1624 aa23.82■■□□□ 1.4
VCX3B-201ENST00000381029 CFAP43Q8NDM7 1665 aa23.81■■□□□ 1.4
VCX3B-201ENST00000381029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.81■■□□□ 1.4
VCX3B-201ENST00000381029 HNRNPUL2Q1KMD3 747 aaKnown RBP23.81■■□□□ 1.4
VCX3B-201ENST00000381029 PLEKHD1A6NEE1 506 aa23.8■■□□□ 1.4
VCX3B-201ENST00000381029 MAGI3Q5TCQ9 1506 aa23.79■■□□□ 1.4
VCX3B-201ENST00000381029 TSPOAP1O95153 1857 aa23.79■■□□□ 1.4
VCX3B-201ENST00000381029 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
VCX3B-201ENST00000381029 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
VCX3B-201ENST00000381029 CCDC18Q5T9S5 1454 aa23.78■■□□□ 1.4
VCX3B-201ENST00000381029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.74■■□□□ 1.39
VCX3B-201ENST00000381029 TROQ12816 1431 aaPredicted RBP23.74■■□□□ 1.39
VCX3B-201ENST00000381029 VPS8Q8N3P4 1428 aa23.72■■□□□ 1.39
VCX3B-201ENST00000381029 TEX14Q8IWB6 1497 aa23.72■■□□□ 1.39
VCX3B-201ENST00000381029 COL17A1Q9UMD9 1497 aaPredicted RBP23.72■■□□□ 1.39
VCX3B-201ENST00000381029 TTC37Q6PGP7 1564 aa23.7■■□□□ 1.38
VCX3B-201ENST00000381029 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.38
VCX3B-201ENST00000381029 KIF14Q15058 1648 aa23.67■■□□□ 1.38
VCX3B-201ENST00000381029 KDM6BO15054 1643 aa23.64■■□□□ 1.38
VCX3B-201ENST00000381029 AEBP2Q6ZN18 517 aaPredicted RBP23.62■■□□□ 1.37
VCX3B-201ENST00000381029 NEO1Q92859 1461 aa23.61■■□□□ 1.37
VCX3B-201ENST00000381029 PLCH2O75038 1416 aa23.6■■□□□ 1.37
VCX3B-201ENST00000381029 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
VCX3B-201ENST00000381029 PHLDB1Q86UU1 1377 aa23.58■■□□□ 1.37
VCX3B-201ENST00000381029 TIAM1Q13009 1591 aa23.56■■□□□ 1.36
VCX3B-201ENST00000381029 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
VCX3B-201ENST00000381029 FANCAO15360 1455 aa23.54■■□□□ 1.36
VCX3B-201ENST00000381029 EHBP1L1Q8N3D4 1523 aa23.52■■□□□ 1.36
VCX3B-201ENST00000381029 AKNAQ7Z591 1439 aa23.51■■□□□ 1.35
VCX3B-201ENST00000381029 MTUS2Q5JR59 1369 aa23.51■■□□□ 1.35
VCX3B-201ENST00000381029 MYO5CQ9NQX4 1742 aa23.5■■□□□ 1.35
VCX3B-201ENST00000381029 CFAP74Q9C0B2 1584 aa23.48■■□□□ 1.35
VCX3B-201ENST00000381029 LRRC9Q6ZRR7 1453 aa23.47■■□□□ 1.35
VCX3B-201ENST00000381029 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
VCX3B-201ENST00000381029 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
VCX3B-201ENST00000381029 PREX2Q70Z35 1606 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms