RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 UBTFP17480 764 aaKnown RBP24.45■■□□□ 1.5
RPP40-202ENST00000380051 CHD1O14646 1710 aa24.39■■□□□ 1.5
RPP40-202ENST00000380051 TNIKQ9UKE5 1360 aa24.37■■□□□ 1.49
RPP40-202ENST00000380051 NUP160Q12769 1436 aa24.34■■□□□ 1.49
RPP40-202ENST00000380051 CEP170Q5SW79 1584 aa24.3■■□□□ 1.48
RPP40-202ENST00000380051 CTTNBP2Q8WZ74 1663 aa24.29■■□□□ 1.48
RPP40-202ENST00000380051 KIAA0586Q9BVV6 1533 aa24.28■■□□□ 1.48
RPP40-202ENST00000380051 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
RPP40-202ENST00000380051 IQGAP2Q13576 1575 aa24.2■■□□□ 1.47
RPP40-202ENST00000380051 PLPPR3Q6T4P5 718 aa24.2■■□□□ 1.47
RPP40-202ENST00000380051 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
RPP40-202ENST00000380051 JPH4Q96JJ6 628 aa24.15■■□□□ 1.46
RPP40-202ENST00000380051 CEP162Q5TB80 1403 aa24.13■■□□□ 1.45
RPP40-202ENST00000380051 MSH5O43196 834 aa24.12■■□□□ 1.45
RPP40-202ENST00000380051 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
RPP40-202ENST00000380051 UGGT2Q9NYU1 1516 aa24.12■■□□□ 1.45
RPP40-202ENST00000380051 CLIP1P30622 1438 aa24.11■■□□□ 1.45
RPP40-202ENST00000380051 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
RPP40-202ENST00000380051 EFCAB5A4FU69 1503 aa24.05■■□□□ 1.44
RPP40-202ENST00000380051 ARHGAP35Q9NRY4 1499 aa24.03■■□□□ 1.44
RPP40-202ENST00000380051 SAMD9Q5K651 1589 aa24.02■■□□□ 1.44
RPP40-202ENST00000380051 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
RPP40-202ENST00000380051 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
RPP40-202ENST00000380051 DISP1Q96F81 1524 aa23.99■■□□□ 1.43
RPP40-202ENST00000380051 P3H3Q8IVL6 736 aa23.97■■□□□ 1.43
RPP40-202ENST00000380051 KIAA0556O60303 1618 aa23.96■■□□□ 1.43
RPP40-202ENST00000380051 ARAP1Q96P48 1450 aa23.92■■□□□ 1.42
RPP40-202ENST00000380051 FHOD3Q2V2M9 1422 aa23.91■■□□□ 1.42
RPP40-202ENST00000380051 PIAS4Q8N2W9 510 aaPredicted RBP23.9■■□□□ 1.42
RPP40-202ENST00000380051 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
RPP40-202ENST00000380051 FMN1Q68DA7 1419 aa23.85■■□□□ 1.41
RPP40-202ENST00000380051 PTPRGP23470 1445 aa23.82■■□□□ 1.4
RPP40-202ENST00000380051 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
RPP40-202ENST00000380051 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
RPP40-202ENST00000380051 ARHGEF11O15085 1522 aa23.78■■□□□ 1.4
RPP40-202ENST00000380051 TTBK1Q5TCY1 1321 aaPredicted RBP23.78■■□□□ 1.4
RPP40-202ENST00000380051 CASKIN1Q8WXD9 1431 aa23.72■■□□□ 1.39
RPP40-202ENST00000380051 RIMBP3CA6NJZ7 1639 aa23.71■■□□□ 1.39
RPP40-202ENST00000380051 RIMBP3BA6NNM3 1639 aa23.71■■□□□ 1.39
RPP40-202ENST00000380051 RIMBP3Q9UFD9 1639 aa23.71■■□□□ 1.39
RPP40-202ENST00000380051 POTEDQ86YR6 584 aa23.7■■□□□ 1.38
RPP40-202ENST00000380051 FYCO1Q9BQS8 1478 aa23.68■■□□□ 1.38
RPP40-202ENST00000380051 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
RPP40-202ENST00000380051 ABCA8O94911 1581 aa23.67■■□□□ 1.38
RPP40-202ENST00000380051 PLB1Q6P1J6 1458 aa23.67■■□□□ 1.38
RPP40-202ENST00000380051 RAPGEF6Q8TEU7 1601 aa23.67■■□□□ 1.38
RPP40-202ENST00000380051 PCF11O94913 1555 aaKnown RBP23.66■■□□□ 1.38
RPP40-202ENST00000380051 ATP1B4Q9UN42 357 aaPredicted RBP23.66■■□□□ 1.38
RPP40-202ENST00000380051 PPP6R1Q9UPN7 881 aa23.64■■□□□ 1.38
RPP40-202ENST00000380051 ADRA2BP18089 450 aa23.62■■□□□ 1.37
RPP40-202ENST00000380051 HECW1Q76N89 1606 aa23.62■■□□□ 1.37
RPP40-202ENST00000380051 APLP2Q06481 763 aa23.62■■□□□ 1.37
RPP40-202ENST00000380051 UHRF1BP1LA0JNW5 1464 aa23.61■■□□□ 1.37
RPP40-202ENST00000380051 ABCC2Q92887 1545 aa23.6■■□□□ 1.37
RPP40-202ENST00000380051 NUP153P49790 1475 aaKnown RBP23.58■■□□□ 1.37
RPP40-202ENST00000380051 CYB5RLQ6IPT4 315 aa23.58■■□□□ 1.37
RPP40-202ENST00000380051 MAP3K1Q13233 1512 aa23.55■■□□□ 1.36
RPP40-202ENST00000380051 CCDC18Q5T9S5 1454 aa23.55■■□□□ 1.36
RPP40-202ENST00000380051 EPRSP07814 1512 aaKnown RBP23.55■■□□□ 1.36
RPP40-202ENST00000380051 ADCY10Q96PN6 1610 aa23.51■■□□□ 1.35
RPP40-202ENST00000380051 LRRIQ1Q96JM4 1722 aa23.51■■□□□ 1.35
RPP40-202ENST00000380051 ATP10BO94823 1461 aa23.51■■□□□ 1.35
RPP40-202ENST00000380051 TIAM1Q13009 1591 aa23.49■■□□□ 1.35
RPP40-202ENST00000380051 KDM5BQ9UGL1 1544 aa23.49■■□□□ 1.35
RPP40-202ENST00000380051 ARID3CA6NKF2 412 aa23.49■■□□□ 1.35
RPP40-202ENST00000380051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
RPP40-202ENST00000380051 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
RPP40-202ENST00000380051 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
RPP40-202ENST00000380051 NPM1P06748 294 aaKnown RBP eCLIP23.47■■□□□ 1.35
RPP40-202ENST00000380051 CDK13Q14004 1512 aaKnown RBP23.47■■□□□ 1.35
RPP40-202ENST00000380051 CFAP43Q8NDM7 1665 aa23.46■■□□□ 1.35
RPP40-202ENST00000380051 PLEKHD1A6NEE1 506 aa23.42■■□□□ 1.34
RPP40-202ENST00000380051 ZCCHC11Q5TAX3 1644 aaKnown RBP23.41■■□□□ 1.34
RPP40-202ENST00000380051 KANK4Q5T7N3 995 aaPredicted RBP23.41■■□□□ 1.34
RPP40-202ENST00000380051 LRRC9Q6ZRR7 1453 aa23.4■■□□□ 1.34
RPP40-202ENST00000380051 MTUS2Q5JR59 1369 aa23.38■■□□□ 1.33
RPP40-202ENST00000380051 TROQ12816 1431 aaPredicted RBP23.34■■□□□ 1.33
RPP40-202ENST00000380051 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
RPP40-202ENST00000380051 EHBP1L1Q8N3D4 1523 aa23.34■■□□□ 1.33
RPP40-202ENST00000380051 MAGI3Q5TCQ9 1506 aa23.33■■□□□ 1.33
RPP40-202ENST00000380051 ASXL2Q76L83 1435 aa23.29■■□□□ 1.32
RPP40-202ENST00000380051 MAPKBP1O60336 1514 aa23.27■■□□□ 1.32
RPP40-202ENST00000380051 WDR7Q9Y4E6 1490 aa23.27■■□□□ 1.32
RPP40-202ENST00000380051 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
RPP40-202ENST00000380051 KCNH8Q96L42 1107 aa23.23■■□□□ 1.31
RPP40-202ENST00000380051 NCOA2Q15596 1464 aa23.21■■□□□ 1.31
RPP40-202ENST00000380051 KIF14Q15058 1648 aa23.2■■□□□ 1.3
RPP40-202ENST00000380051 ABCC10Q5T3U5 1492 aa23.15■■□□□ 1.3
RPP40-202ENST00000380051 PHLDB1Q86UU1 1377 aa23.13■■□□□ 1.29
RPP40-202ENST00000380051 CCNB3Q8WWL7 1395 aa23.13■■□□□ 1.29
RPP40-202ENST00000380051 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.13■■□□□ 1.29
RPP40-202ENST00000380051 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
RPP40-202ENST00000380051 ABCA9Q8IUA7 1624 aa23.09■■□□□ 1.29
RPP40-202ENST00000380051 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.29
RPP40-202ENST00000380051 GLI2P10070 1586 aa23.08■■□□□ 1.28
RPP40-202ENST00000380051 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
RPP40-202ENST00000380051 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
RPP40-202ENST00000380051 ITSN2Q9NZM3 1697 aa23.05■■□□□ 1.28
RPP40-202ENST00000380051 FAM69CQ0P6D2 419 aa23.05■■□□□ 1.28
RPP40-202ENST00000380051 CDC42BPAQ5VT25 1732 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms