RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 BIVM-ERCC5R4GMW8 1640 aa8.07□□□□□ -1.12
C9orf72-203ENST00000380003 RUSC2Q8N2Y8 1516 aa8.05□□□□□ -1.12
C9orf72-203ENST00000380003 FHAD1B1AJZ9 1412 aa8.05□□□□□ -1.12
C9orf72-203ENST00000380003 ADAMTS12P58397 1594 aa8.05□□□□□ -1.12
C9orf72-203ENST00000380003 IGF1RP08069 1367 aa8.05□□□□□ -1.12
C9orf72-203ENST00000380003 RANGAP1P46060 587 aaPredicted RBP8.05□□□□□ -1.12
C9orf72-203ENST00000380003 PRG4Q92954 1404 aaPredicted RBP8.04□□□□□ -1.12
C9orf72-203ENST00000380003 FAM9AQ8IZU1 332 aaPredicted RBP8.03□□□□□ -1.12
C9orf72-203ENST00000380003 NUP160Q12769 1436 aa8.03□□□□□ -1.12
C9orf72-203ENST00000380003 ARID3CA6NKF2 412 aa8.01□□□□□ -1.13
C9orf72-203ENST00000380003 KIF27Q86VH2 1401 aa8□□□□□ -1.13
C9orf72-203ENST00000380003 ERICH3Q5RHP9 1530 aa8□□□□□ -1.13
C9orf72-203ENST00000380003 CARMIL1Q5VZK9 1371 aa8□□□□□ -1.13
C9orf72-203ENST00000380003 FAM69CQ0P6D2 419 aa7.98□□□□□ -1.13
C9orf72-203ENST00000380003 P3H3Q8IVL6 736 aa7.98□□□□□ -1.13
C9orf72-203ENST00000380003 NPM1P06748 294 aaKnown RBP eCLIP7.95□□□□□ -1.14
C9orf72-203ENST00000380003 PIAS4Q8N2W9 510 aaPredicted RBP7.93□□□□□ -1.14
C9orf72-203ENST00000380003 SHROOM2Q13796 1616 aa7.93□□□□□ -1.14
C9orf72-203ENST00000380003 KIAA0586Q9BVV6 1533 aa7.92□□□□□ -1.14
C9orf72-203ENST00000380003 PTPRGP23470 1445 aa7.91□□□□□ -1.14
C9orf72-203ENST00000380003 KCNH8Q96L42 1107 aa7.9□□□□□ -1.15
C9orf72-203ENST00000380003 ADCY10Q96PN6 1610 aa7.89□□□□□ -1.15
C9orf72-203ENST00000380003 TSPOAP1O95153 1857 aa7.87□□□□□ -1.15
C9orf72-203ENST00000380003 RAPGEF2Q9Y4G8 1499 aa7.87□□□□□ -1.15
C9orf72-203ENST00000380003 CUL7Q14999 1698 aa7.87□□□□□ -1.15
C9orf72-203ENST00000380003 DISP1Q96F81 1524 aa7.86□□□□□ -1.15
C9orf72-203ENST00000380003 IQGAP2Q13576 1575 aa7.86□□□□□ -1.15
C9orf72-203ENST00000380003 PLB1Q6P1J6 1458 aa7.85□□□□□ -1.15
C9orf72-203ENST00000380003 TNIKQ9UKE5 1360 aa7.85□□□□□ -1.15
C9orf72-203ENST00000380003 KIF13AQ9H1H9 1805 aa7.85□□□□□ -1.15
C9orf72-203ENST00000380003 CSRNP3Q8WYN3 585 aa7.85□□□□□ -1.15
C9orf72-203ENST00000380003 CARMIL2Q6F5E8 1435 aa7.85□□□□□ -1.15
C9orf72-203ENST00000380003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.85□□□□□ -1.15
C9orf72-203ENST00000380003 HNRNPUL2Q1KMD3 747 aaKnown RBP7.85□□□□□ -1.15
C9orf72-203ENST00000380003 ABCC10Q5T3U5 1492 aa7.84□□□□□ -1.15
C9orf72-203ENST00000380003 ASXL2Q76L83 1435 aa7.83□□□□□ -1.16
C9orf72-203ENST00000380003 ATP1B4Q9UN42 357 aaPredicted RBP7.82□□□□□ -1.16
C9orf72-203ENST00000380003 UACAQ9BZF9 1416 aa7.82□□□□□ -1.16
C9orf72-203ENST00000380003 DIP2BQ9P265 1576 aa7.81□□□□□ -1.16
C9orf72-203ENST00000380003 ABCC2Q92887 1545 aa7.8□□□□□ -1.16
C9orf72-203ENST00000380003 UBTFP17480 764 aaKnown RBP7.8□□□□□ -1.16
C9orf72-203ENST00000380003 PRXQ9BXM0 1461 aa7.8□□□□□ -1.16
C9orf72-203ENST00000380003 COL17A1Q9UMD9 1497 aaPredicted RBP7.78□□□□□ -1.16
C9orf72-203ENST00000380003 KDM4FA0A1W2PPD8 638 aa7.78□□□□□ -1.16
C9orf72-203ENST00000380003 MAPKBP1O60336 1514 aa7.78□□□□□ -1.16
C9orf72-203ENST00000380003 KIAA0556O60303 1618 aa7.78□□□□□ -1.16
C9orf72-203ENST00000380003 UGGT2Q9NYU1 1516 aa7.77□□□□□ -1.17
C9orf72-203ENST00000380003 FHOD3Q2V2M9 1422 aa7.76□□□□□ -1.17
C9orf72-203ENST00000380003 PLPPR3Q6T4P5 718 aa7.75□□□□□ -1.17
C9orf72-203ENST00000380003 KDM6BO15054 1643 aa7.75□□□□□ -1.17
C9orf72-203ENST00000380003 ZCCHC11Q5TAX3 1644 aaKnown RBP7.75□□□□□ -1.17
C9orf72-203ENST00000380003 EPRSP07814 1512 aaKnown RBP7.74□□□□□ -1.17
C9orf72-203ENST00000380003 RAPGEF3O95398 923 aa7.74□□□□□ -1.17
C9orf72-203ENST00000380003 CTTNBP2Q8WZ74 1663 aa7.74□□□□□ -1.17
C9orf72-203ENST00000380003 KDM5BQ9UGL1 1544 aa7.73□□□□□ -1.17
C9orf72-203ENST00000380003 UHRF1BP1LA0JNW5 1464 aa7.71□□□□□ -1.17
C9orf72-203ENST00000380003 ATP10BO94823 1461 aa7.71□□□□□ -1.17
C9orf72-203ENST00000380003 WDR7Q9Y4E6 1490 aa7.71□□□□□ -1.17
C9orf72-203ENST00000380003 CD109Q6YHK3 1445 aa7.71□□□□□ -1.17
C9orf72-203ENST00000380003 PPRC1Q5VV67 1664 aaKnown RBP7.7□□□□□ -1.18
C9orf72-203ENST00000380003 GOLGA3Q08378 1498 aa7.7□□□□□ -1.18
C9orf72-203ENST00000380003 ABCA8O94911 1581 aa7.69□□□□□ -1.18
C9orf72-203ENST00000380003 NUP153P49790 1475 aaKnown RBP7.67□□□□□ -1.18
C9orf72-203ENST00000380003 PLEKHD1A6NEE1 506 aa7.67□□□□□ -1.18
C9orf72-203ENST00000380003 CDK13Q14004 1512 aaKnown RBP7.66□□□□□ -1.18
C9orf72-203ENST00000380003 ARID4BQ4LE39 1312 aaPredicted RBP7.66□□□□□ -1.18
C9orf72-203ENST00000380003 LOC105371045A0A1W2PR82 267 aa7.66□□□□□ -1.18
C9orf72-203ENST00000380003 MLECQ14165 292 aa7.66□□□□□ -1.18
C9orf72-203ENST00000380003 MAP3K4Q9Y6R4 1608 aa7.66□□□□□ -1.18
C9orf72-203ENST00000380003 ADGRL1O94910 1474 aa7.65□□□□□ -1.19
C9orf72-203ENST00000380003 GLI2P10070 1586 aa7.64□□□□□ -1.19
C9orf72-203ENST00000380003 SAMD9Q5K651 1589 aa7.64□□□□□ -1.19
C9orf72-203ENST00000380003 RAPGEF6Q8TEU7 1601 aa7.63□□□□□ -1.19
C9orf72-203ENST00000380003 EEA1Q15075 1411 aa7.63□□□□□ -1.19
C9orf72-203ENST00000380003 TEX14Q8IWB6 1497 aa7.62□□□□□ -1.19
C9orf72-203ENST00000380003 MYT1LQ9UL68 1186 aa7.62□□□□□ -1.19
C9orf72-203ENST00000380003 ARHGAP35Q9NRY4 1499 aa7.62□□□□□ -1.19
C9orf72-203ENST00000380003 AFAP1Q8N556 730 aa7.6□□□□□ -1.19
C9orf72-203ENST00000380003 ZNF777Q9ULD5 760 aaPredicted RBP7.6□□□□□ -1.19
C9orf72-203ENST00000380003 KIF21BO75037 1637 aa7.6□□□□□ -1.19
C9orf72-203ENST00000380003 MAGI3Q5TCQ9 1506 aa7.59□□□□□ -1.19
C9orf72-203ENST00000380003 TTC37Q6PGP7 1564 aa7.58□□□□□ -1.2
C9orf72-203ENST00000380003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.58□□□□□ -1.2
C9orf72-203ENST00000380003 HSPA2P54652 639 aa7.57□□□□□ -1.2
C9orf72-203ENST00000380003 FANCAO15360 1455 aa7.57□□□□□ -1.2
C9orf72-203ENST00000380003 CFAP43Q8NDM7 1665 aa7.57□□□□□ -1.2
C9orf72-203ENST00000380003 CEBPAP49715 358 aaPredicted RBP7.57□□□□□ -1.2
C9orf72-203ENST00000380003 PPP6R1Q9UPN7 881 aa7.57□□□□□ -1.2
C9orf72-203ENST00000380003 YEATS2Q9ULM3 1422 aa7.57□□□□□ -1.2
C9orf72-203ENST00000380003 ADRA2BP18089 450 aa7.57□□□□□ -1.2
C9orf72-203ENST00000380003 AKNAQ7Z591 1439 aa7.56□□□□□ -1.2
C9orf72-203ENST00000380003 ABCA9Q8IUA7 1624 aa7.56□□□□□ -1.2
C9orf72-203ENST00000380003 SCAPERQ9BY12 1400 aa7.55□□□□□ -1.2
C9orf72-203ENST00000380003 KIF14Q15058 1648 aa7.55□□□□□ -1.2
C9orf72-203ENST00000380003 FMN1Q68DA7 1419 aa7.54□□□□□ -1.2
C9orf72-203ENST00000380003 ILDR1Q86SU0 546 aaPredicted RBP7.54□□□□□ -1.2
C9orf72-203ENST00000380003 CLIP1P30622 1438 aa7.54□□□□□ -1.2
C9orf72-203ENST00000380003 EFCAB5A4FU69 1503 aa7.54□□□□□ -1.2
C9orf72-203ENST00000380003 CDK11AQ9UQ88 783 aaPredicted RBP7.54□□□□□ -1.2
C9orf72-203ENST00000380003 ARAP3Q8WWN8 1544 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms