RNA–Protein interactions for RNA: ENST00000379995.1

C9orf72-201, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 3

Gene C9orf72, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-201ENST00000379995 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
C9orf72-201ENST00000379995 IGF1RP08069 1367 aa16.6■□□□□ 0.25
C9orf72-201ENST00000379995 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
C9orf72-201ENST00000379995 FOXD1Q16676 465 aa16.58■□□□□ 0.24
C9orf72-201ENST00000379995 KIF27Q86VH2 1401 aa16.57■□□□□ 0.24
C9orf72-201ENST00000379995 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
C9orf72-201ENST00000379995 KIAA0586Q9BVV6 1533 aa16.49■□□□□ 0.23
C9orf72-201ENST00000379995 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
C9orf72-201ENST00000379995 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
C9orf72-201ENST00000379995 FAM69CQ0P6D2 419 aa16.42■□□□□ 0.22
C9orf72-201ENST00000379995 CUL7Q14999 1698 aa16.4■□□□□ 0.22
C9orf72-201ENST00000379995 ABCC10Q5T3U5 1492 aa16.38■□□□□ 0.21
C9orf72-201ENST00000379995 TTBK1Q5TCY1 1321 aaPredicted RBP16.38■□□□□ 0.21
C9orf72-201ENST00000379995 PTPRGP23470 1445 aa16.37■□□□□ 0.21
C9orf72-201ENST00000379995 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
C9orf72-201ENST00000379995 TNIKQ9UKE5 1360 aa16.34■□□□□ 0.21
C9orf72-201ENST00000379995 CARMIL2Q6F5E8 1435 aa16.34■□□□□ 0.21
C9orf72-201ENST00000379995 ADCY10Q96PN6 1610 aa16.34■□□□□ 0.21
C9orf72-201ENST00000379995 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
C9orf72-201ENST00000379995 DIP2BQ9P265 1576 aa16.27■□□□□ 0.2
C9orf72-201ENST00000379995 KIF13AQ9H1H9 1805 aa16.27■□□□□ 0.2
C9orf72-201ENST00000379995 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
C9orf72-201ENST00000379995 ABCC2Q92887 1545 aa16.24■□□□□ 0.19
C9orf72-201ENST00000379995 DISP1Q96F81 1524 aa16.24■□□□□ 0.19
C9orf72-201ENST00000379995 UACAQ9BZF9 1416 aa16.23■□□□□ 0.19
C9orf72-201ENST00000379995 ASXL2Q76L83 1435 aa16.21■□□□□ 0.19
C9orf72-201ENST00000379995 UHRF1BP1LA0JNW5 1464 aa16.21■□□□□ 0.19
C9orf72-201ENST00000379995 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
C9orf72-201ENST00000379995 PLB1Q6P1J6 1458 aa16.19■□□□□ 0.18
C9orf72-201ENST00000379995 KDM5BQ9UGL1 1544 aa16.14■□□□□ 0.17
C9orf72-201ENST00000379995 PRXQ9BXM0 1461 aa16.13■□□□□ 0.17
C9orf72-201ENST00000379995 KDM6BO15054 1643 aa16.12■□□□□ 0.17
C9orf72-201ENST00000379995 KIAA0556O60303 1618 aa16.12■□□□□ 0.17
C9orf72-201ENST00000379995 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
C9orf72-201ENST00000379995 EPRSP07814 1512 aaKnown RBP16.1■□□□□ 0.17
C9orf72-201ENST00000379995 GLI2P10070 1586 aa16.1■□□□□ 0.17
C9orf72-201ENST00000379995 KDM4FA0A1W2PPD8 638 aa16.09■□□□□ 0.17
C9orf72-201ENST00000379995 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
C9orf72-201ENST00000379995 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
C9orf72-201ENST00000379995 TSPOAP1O95153 1857 aa16.05■□□□□ 0.16
C9orf72-201ENST00000379995 COL17A1Q9UMD9 1497 aaPredicted RBP16.03■□□□□ 0.16
C9orf72-201ENST00000379995 WDR7Q9Y4E6 1490 aa16.03■□□□□ 0.16
C9orf72-201ENST00000379995 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.16
C9orf72-201ENST00000379995 P3H3Q8IVL6 736 aa16.02■□□□□ 0.16
C9orf72-201ENST00000379995 KCNH8Q96L42 1107 aa16.02■□□□□ 0.16
C9orf72-201ENST00000379995 TEX14Q8IWB6 1497 aa16■□□□□ 0.15
C9orf72-201ENST00000379995 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
C9orf72-201ENST00000379995 ABCA8O94911 1581 aa16■□□□□ 0.15
C9orf72-201ENST00000379995 PPRC1Q5VV67 1664 aaKnown RBP15.99■□□□□ 0.15
C9orf72-201ENST00000379995 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
C9orf72-201ENST00000379995 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
C9orf72-201ENST00000379995 CTTNBP2Q8WZ74 1663 aa15.97■□□□□ 0.15
C9orf72-201ENST00000379995 MAP3K4Q9Y6R4 1608 aa15.96■□□□□ 0.15
C9orf72-201ENST00000379995 MAGI3Q5TCQ9 1506 aa15.93■□□□□ 0.14
C9orf72-201ENST00000379995 EEA1Q15075 1411 aa15.92■□□□□ 0.14
C9orf72-201ENST00000379995 ATP10BO94823 1461 aa15.91■□□□□ 0.14
C9orf72-201ENST00000379995 RANGAP1P46060 587 aaPredicted RBP15.91■□□□□ 0.14
C9orf72-201ENST00000379995 ADGRL1O94910 1474 aa15.9■□□□□ 0.14
C9orf72-201ENST00000379995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
C9orf72-201ENST00000379995 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
C9orf72-201ENST00000379995 SAMD9Q5K651 1589 aa15.85■□□□□ 0.13
C9orf72-201ENST00000379995 FHOD3Q2V2M9 1422 aa15.84■□□□□ 0.13
C9orf72-201ENST00000379995 CFAP43Q8NDM7 1665 aa15.83■□□□□ 0.12
C9orf72-201ENST00000379995 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
C9orf72-201ENST00000379995 PHLDB1Q86UU1 1377 aa15.79■□□□□ 0.12
C9orf72-201ENST00000379995 ARAP3Q8WWN8 1544 aa15.78■□□□□ 0.12
C9orf72-201ENST00000379995 PLEKHD1A6NEE1 506 aa15.78■□□□□ 0.12
C9orf72-201ENST00000379995 RAPGEF6Q8TEU7 1601 aa15.78■□□□□ 0.12
C9orf72-201ENST00000379995 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
C9orf72-201ENST00000379995 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
C9orf72-201ENST00000379995 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
C9orf72-201ENST00000379995 ABCA9Q8IUA7 1624 aa15.74■□□□□ 0.11
C9orf72-201ENST00000379995 NEO1Q92859 1461 aa15.73■□□□□ 0.11
C9orf72-201ENST00000379995 EFCAB5A4FU69 1503 aa15.72■□□□□ 0.11
C9orf72-201ENST00000379995 KIF21BO75037 1637 aa15.72■□□□□ 0.11
C9orf72-201ENST00000379995 ATP1B4Q9UN42 357 aaPredicted RBP15.67■□□□□ 0.1
C9orf72-201ENST00000379995 AKNAQ7Z591 1439 aa15.65■□□□□ 0.1
C9orf72-201ENST00000379995 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
C9orf72-201ENST00000379995 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
C9orf72-201ENST00000379995 HECW2Q9P2P5 1572 aa15.64■□□□□ 0.09
C9orf72-201ENST00000379995 FANCAO15360 1455 aa15.64■□□□□ 0.09
C9orf72-201ENST00000379995 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
C9orf72-201ENST00000379995 FMN1Q68DA7 1419 aa15.63■□□□□ 0.09
C9orf72-201ENST00000379995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.63■□□□□ 0.09
C9orf72-201ENST00000379995 ARHGAP35Q9NRY4 1499 aa15.62■□□□□ 0.09
C9orf72-201ENST00000379995 ILDR1Q86SU0 546 aaPredicted RBP15.61■□□□□ 0.09
C9orf72-201ENST00000379995 FRMPD1Q5SYB0 1578 aa15.61■□□□□ 0.09
C9orf72-201ENST00000379995 CDK11AQ9UQ88 783 aaPredicted RBP15.6■□□□□ 0.09
C9orf72-201ENST00000379995 PTPRMP28827 1452 aa15.59■□□□□ 0.09
C9orf72-201ENST00000379995 PLCH2O75038 1416 aa15.59■□□□□ 0.09
C9orf72-201ENST00000379995 TTC37Q6PGP7 1564 aa15.58■□□□□ 0.08
C9orf72-201ENST00000379995 MSH5O43196 834 aa15.57■□□□□ 0.08
C9orf72-201ENST00000379995 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
C9orf72-201ENST00000379995 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
C9orf72-201ENST00000379995 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
C9orf72-201ENST00000379995 SCAPERQ9BY12 1400 aa15.56■□□□□ 0.08
C9orf72-201ENST00000379995 YEATS2Q9ULM3 1422 aa15.54■□□□□ 0.08
C9orf72-201ENST00000379995 ADRA2BP18089 450 aa15.54■□□□□ 0.08
C9orf72-201ENST00000379995 ADAMTSL3P82987 1691 aa15.54■□□□□ 0.08
C9orf72-201ENST00000379995 ARHGEF40Q8TER5 1519 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms