RNA–Protein interactions for RNA: ENST00000379716.5

SH3KBP1-203, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 2 BASIC

Gene SH3KBP1, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-203ENST00000379716 LOC105371045A0A1W2PR82 267 aa13.55□□□□□ -0.24
SH3KBP1-203ENST00000379716 ZMYND15Q9H091 742 aa13.55□□□□□ -0.24
SH3KBP1-203ENST00000379716 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
SH3KBP1-203ENST00000379716 ATP1B4Q9UN42 357 aaPredicted RBP13.55□□□□□ -0.24
SH3KBP1-203ENST00000379716 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
SH3KBP1-203ENST00000379716 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
SH3KBP1-203ENST00000379716 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
SH3KBP1-203ENST00000379716 CHMP4AQ9BY43 222 aa13.53□□□□□ -0.24
SH3KBP1-203ENST00000379716 PAXIP1Q6ZW49 1069 aaPredicted RBP13.52□□□□□ -0.25
SH3KBP1-203ENST00000379716 CFTRP13569 1480 aa13.51□□□□□ -0.25
SH3KBP1-203ENST00000379716 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
SH3KBP1-203ENST00000379716 AAMPQ13685 434 aa13.47□□□□□ -0.25
SH3KBP1-203ENST00000379716 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
SH3KBP1-203ENST00000379716 CHMP7Q8WUX9 453 aaPredicted RBP13.47□□□□□ -0.25
SH3KBP1-203ENST00000379716 SOGA1O94964 1423 aa13.44□□□□□ -0.26
SH3KBP1-203ENST00000379716 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
SH3KBP1-203ENST00000379716 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
SH3KBP1-203ENST00000379716 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
SH3KBP1-203ENST00000379716 CUX2O14529 1486 aa13.38□□□□□ -0.27
SH3KBP1-203ENST00000379716 NAP1L5Q96NT1 182 aaPredicted RBP13.37□□□□□ -0.27
SH3KBP1-203ENST00000379716 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
SH3KBP1-203ENST00000379716 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
SH3KBP1-203ENST00000379716 IL27Q8NEV9 243 aa13.36□□□□□ -0.27
SH3KBP1-203ENST00000379716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.35□□□□□ -0.27
SH3KBP1-203ENST00000379716 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
SH3KBP1-203ENST00000379716 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
SH3KBP1-203ENST00000379716 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.28
SH3KBP1-203ENST00000379716 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
SH3KBP1-203ENST00000379716 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
SH3KBP1-203ENST00000379716 IRX6P78412 446 aaPredicted RBP13.3□□□□□ -0.28
SH3KBP1-203ENST00000379716 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
SH3KBP1-203ENST00000379716 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
SH3KBP1-203ENST00000379716 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
SH3KBP1-203ENST00000379716 SUPT16HQ9Y5B9 1047 aaKnown RBP13.27□□□□□ -0.28
SH3KBP1-203ENST00000379716 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
SH3KBP1-203ENST00000379716 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
SH3KBP1-203ENST00000379716 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
SH3KBP1-203ENST00000379716 CUX1P39880 1505 aa13.25□□□□□ -0.29
SH3KBP1-203ENST00000379716 TRIM26Q12899 539 aaPredicted RBP13.25□□□□□ -0.29
SH3KBP1-203ENST00000379716 RBM19Q9Y4C8 960 aaKnown RBP13.24□□□□□ -0.29
SH3KBP1-203ENST00000379716 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
SH3KBP1-203ENST00000379716 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
SH3KBP1-203ENST00000379716 ZNF326Q5BKZ1 582 aaKnown RBP13.23□□□□□ -0.29
SH3KBP1-203ENST00000379716 KIF21AQ7Z4S6 1674 aa13.22□□□□□ -0.29
SH3KBP1-203ENST00000379716 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
SH3KBP1-203ENST00000379716 SYNJ1O43426 1573 aa13.22□□□□□ -0.29
SH3KBP1-203ENST00000379716 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
SH3KBP1-203ENST00000379716 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
SH3KBP1-203ENST00000379716 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
SH3KBP1-203ENST00000379716 NBR1Q14596 966 aa13.19□□□□□ -0.3
SH3KBP1-203ENST00000379716 DNMBPQ6XZF7 1577 aa13.18□□□□□ -0.3
SH3KBP1-203ENST00000379716 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
SH3KBP1-203ENST00000379716 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
SH3KBP1-203ENST00000379716 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
SH3KBP1-203ENST00000379716 CDK11BP21127 795 aaKnown RBP13.15□□□□□ -0.3
SH3KBP1-203ENST00000379716 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
SH3KBP1-203ENST00000379716 NAP1L2Q9ULW6 460 aaPredicted RBP13.15□□□□□ -0.3
SH3KBP1-203ENST00000379716 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
SH3KBP1-203ENST00000379716 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
SH3KBP1-203ENST00000379716 BCANQ96GW7 911 aa13.14□□□□□ -0.31
SH3KBP1-203ENST00000379716 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
SH3KBP1-203ENST00000379716 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
SH3KBP1-203ENST00000379716 MSH5O43196 834 aa13.13□□□□□ -0.31
SH3KBP1-203ENST00000379716 EEA1Q15075 1411 aa13.11□□□□□ -0.31
SH3KBP1-203ENST00000379716 IGF1RP08069 1367 aa13.11□□□□□ -0.31
SH3KBP1-203ENST00000379716 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
SH3KBP1-203ENST00000379716 RSPH4AQ5TD94 716 aa13.07□□□□□ -0.32
SH3KBP1-203ENST00000379716 BBXQ8WY36 941 aaPredicted RBP13.07□□□□□ -0.32
SH3KBP1-203ENST00000379716 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
SH3KBP1-203ENST00000379716 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
SH3KBP1-203ENST00000379716 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
SH3KBP1-203ENST00000379716 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
SH3KBP1-203ENST00000379716 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
SH3KBP1-203ENST00000379716 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
SH3KBP1-203ENST00000379716 WDR62O43379 1518 aa13.02□□□□□ -0.32
SH3KBP1-203ENST00000379716 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
SH3KBP1-203ENST00000379716 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
SH3KBP1-203ENST00000379716 KCNA4P22459 653 aa12.99□□□□□ -0.33
SH3KBP1-203ENST00000379716 ITGAEP38570 1179 aa12.98□□□□□ -0.33
SH3KBP1-203ENST00000379716 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
SH3KBP1-203ENST00000379716 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
SH3KBP1-203ENST00000379716 CLIP1P30622 1438 aa12.97□□□□□ -0.33
SH3KBP1-203ENST00000379716 KCNH8Q96L42 1107 aa12.97□□□□□ -0.33
SH3KBP1-203ENST00000379716 PRDM2Q13029 1718 aa12.96□□□□□ -0.33
SH3KBP1-203ENST00000379716 HSP90AA2PQ14568 343 aaPredicted RBP12.96□□□□□ -0.33
SH3KBP1-203ENST00000379716 ZFP91Q96JP5 570 aaPredicted RBP12.96□□□□□ -0.33
SH3KBP1-203ENST00000379716 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
SH3KBP1-203ENST00000379716 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
SH3KBP1-203ENST00000379716 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
SH3KBP1-203ENST00000379716 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
SH3KBP1-203ENST00000379716 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
SH3KBP1-203ENST00000379716 CEP162Q5TB80 1403 aa12.92□□□□□ -0.34
SH3KBP1-203ENST00000379716 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
SH3KBP1-203ENST00000379716 TNIKQ9UKE5 1360 aa12.91□□□□□ -0.34
SH3KBP1-203ENST00000379716 CARMIL2Q6F5E8 1435 aa12.9□□□□□ -0.34
SH3KBP1-203ENST00000379716 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
SH3KBP1-203ENST00000379716 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
SH3KBP1-203ENST00000379716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
SH3KBP1-203ENST00000379716 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
SH3KBP1-203ENST00000379716 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms