RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 PRG4Q92954 1404 aaPredicted RBP42.27■■■■■ 4.36
TNFRSF4-201ENST00000379236 JPH4Q96JJ6 628 aa42.25■■■■■ 4.35
TNFRSF4-201ENST00000379236 CARMIL1Q5VZK9 1371 aa42.21■■■■■ 4.35
TNFRSF4-201ENST00000379236 KIAA0586Q9BVV6 1533 aa42.16■■■■■ 4.34
TNFRSF4-201ENST00000379236 RAPGEF2Q9Y4G8 1499 aa41.93■■■■■ 4.3
TNFRSF4-201ENST00000379236 IQGAP2Q13576 1575 aa41.93■■■■■ 4.3
TNFRSF4-201ENST00000379236 CARMIL2Q6F5E8 1435 aa41.81■■■■■ 4.28
TNFRSF4-201ENST00000379236 NPM1P06748 294 aaKnown RBP eCLIP41.76■■■■■ 4.28
TNFRSF4-201ENST00000379236 ADCY10Q96PN6 1610 aa41.75■■■■■ 4.27
TNFRSF4-201ENST00000379236 CTTNBP2Q8WZ74 1663 aa41.74■■■■■ 4.27
TNFRSF4-201ENST00000379236 TTBK1Q5TCY1 1321 aaPredicted RBP41.69■■■■■ 4.26
TNFRSF4-201ENST00000379236 PTPRGP23470 1445 aa41.68■■■■■ 4.26
TNFRSF4-201ENST00000379236 KIF13AQ9H1H9 1805 aa41.66■■■■■ 4.26
TNFRSF4-201ENST00000379236 TNIKQ9UKE5 1360 aa41.65■■■■■ 4.26
TNFRSF4-201ENST00000379236 UGGT2Q9NYU1 1516 aa41.6■■■■■ 4.25
TNFRSF4-201ENST00000379236 MAPKBP1O60336 1514 aa41.59■■■■■ 4.25
TNFRSF4-201ENST00000379236 DISP1Q96F81 1524 aa41.57■■■■■ 4.25
TNFRSF4-201ENST00000379236 PRXQ9BXM0 1461 aa41.55■■■■■ 4.24
TNFRSF4-201ENST00000379236 KIAA0556O60303 1618 aa41.52■■■■■ 4.24
TNFRSF4-201ENST00000379236 ABCC10Q5T3U5 1492 aa41.44■■■■■ 4.22
TNFRSF4-201ENST00000379236 DIP2BQ9P265 1576 aa41.42■■■■■ 4.22
TNFRSF4-201ENST00000379236 FAM69CQ0P6D2 419 aa41.4■■■■■ 4.22
TNFRSF4-201ENST00000379236 CSRNP3Q8WYN3 585 aa41.4■■■■■ 4.22
TNFRSF4-201ENST00000379236 EEA1Q15075 1411 aa41.4■■■■■ 4.22
TNFRSF4-201ENST00000379236 GOLGA3Q08378 1498 aa41.4■■■■■ 4.22
TNFRSF4-201ENST00000379236 ABCC2Q92887 1545 aa41.39■■■■■ 4.22
TNFRSF4-201ENST00000379236 UACAQ9BZF9 1416 aa41.38■■■■■ 4.22
TNFRSF4-201ENST00000379236 UHRF1BP1LA0JNW5 1464 aa41.36■■■■■ 4.21
TNFRSF4-201ENST00000379236 TSPOAP1O95153 1857 aa41.25■■■■■ 4.19
TNFRSF4-201ENST00000379236 ZCCHC11Q5TAX3 1644 aaKnown RBP41.2■■■■■ 4.19
TNFRSF4-201ENST00000379236 FAM9AQ8IZU1 332 aaPredicted RBP41.2■■■■■ 4.19
TNFRSF4-201ENST00000379236 PLB1Q6P1J6 1458 aa41.2■■■■■ 4.19
TNFRSF4-201ENST00000379236 ASXL2Q76L83 1435 aa41.19■■■■■ 4.18
TNFRSF4-201ENST00000379236 KDM5BQ9UGL1 1544 aa41.16■■■■■ 4.18
TNFRSF4-201ENST00000379236 CHIC1Q5VXU3 224 aa41.06■■■■■ 4.16
TNFRSF4-201ENST00000379236 ABCA8O94911 1581 aa41.06■■■■■ 4.16
TNFRSF4-201ENST00000379236 KIF21BO75037 1637 aa41.06■■■■■ 4.16
TNFRSF4-201ENST00000379236 GLI2P10070 1586 aa41.04■■■■■ 4.16
TNFRSF4-201ENST00000379236 SAMD9Q5K651 1589 aa41.02■■■■■ 4.16
TNFRSF4-201ENST00000379236 P3H3Q8IVL6 736 aa41.01■■■■■ 4.16
TNFRSF4-201ENST00000379236 KDM6BO15054 1643 aa41■■■■■ 4.15
TNFRSF4-201ENST00000379236 EPRSP07814 1512 aaKnown RBP40.94■■■■■ 4.14
TNFRSF4-201ENST00000379236 RANGAP1P46060 587 aaPredicted RBP40.91■■■■■ 4.14
TNFRSF4-201ENST00000379236 WDR7Q9Y4E6 1490 aa40.9■■■■■ 4.14
TNFRSF4-201ENST00000379236 PPRC1Q5VV67 1664 aaKnown RBP40.88■■■■■ 4.14
TNFRSF4-201ENST00000379236 MAP3K4Q9Y6R4 1608 aa40.88■■■■■ 4.13
TNFRSF4-201ENST00000379236 RAPGEF6Q8TEU7 1601 aa40.82■■■■■ 4.12
TNFRSF4-201ENST00000379236 EHMT2Q96KQ7 1210 aa40.76■■■■■ 4.12
TNFRSF4-201ENST00000379236 EFCAB5A4FU69 1503 aa40.76■■■■■ 4.12
TNFRSF4-201ENST00000379236 TEX14Q8IWB6 1497 aa40.75■■■■■ 4.11
TNFRSF4-201ENST00000379236 ARID3CA6NKF2 412 aa40.74■■■■■ 4.11
TNFRSF4-201ENST00000379236 AEBP2Q6ZN18 517 aaPredicted RBP40.74■■■■■ 4.11
TNFRSF4-201ENST00000379236 FHOD3Q2V2M9 1422 aa40.73■■■■■ 4.11
TNFRSF4-201ENST00000379236 CFAP43Q8NDM7 1665 aa40.72■■■■■ 4.11
TNFRSF4-201ENST00000379236 UBTFP17480 764 aaKnown RBP40.72■■■■■ 4.11
TNFRSF4-201ENST00000379236 KCNH8Q96L42 1107 aa40.71■■■■■ 4.11
TNFRSF4-201ENST00000379236 ATP10BO94823 1461 aa40.67■■■■■ 4.1
TNFRSF4-201ENST00000379236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.61■■■■■ 4.09
TNFRSF4-201ENST00000379236 HNRNPUL2Q1KMD3 747 aaKnown RBP40.61■■■■■ 4.09
TNFRSF4-201ENST00000379236 CD109Q6YHK3 1445 aa40.59■■■■■ 4.09
TNFRSF4-201ENST00000379236 NUP153P49790 1475 aaKnown RBP40.54■■■■■ 4.08
TNFRSF4-201ENST00000379236 MAGI3Q5TCQ9 1506 aa40.52■■■■■ 4.08
TNFRSF4-201ENST00000379236 ABCA9Q8IUA7 1624 aa40.45■■■■■ 4.07
TNFRSF4-201ENST00000379236 COL17A1Q9UMD9 1497 aaPredicted RBP40.41■■■■■ 4.06
TNFRSF4-201ENST00000379236 ARHGAP35Q9NRY4 1499 aa40.37■■■■■ 4.05
TNFRSF4-201ENST00000379236 FMN1Q68DA7 1419 aa40.36■■■■■ 4.05
TNFRSF4-201ENST00000379236 PLEKHD1A6NEE1 506 aa40.33■■■■■ 4.05
TNFRSF4-201ENST00000379236 HECW1Q76N89 1606 aa40.32■■■■■ 4.05
TNFRSF4-201ENST00000379236 ATP1B4Q9UN42 357 aaPredicted RBP40.28■■■■■ 4.04
TNFRSF4-201ENST00000379236 CDK13Q14004 1512 aaKnown RBP40.25■■■■■ 4.03
TNFRSF4-201ENST00000379236 ARAP3Q8WWN8 1544 aa40.18■■■■■ 4.02
TNFRSF4-201ENST00000379236 PHLDB1Q86UU1 1377 aa40.18■■■■■ 4.02
TNFRSF4-201ENST00000379236 NEO1Q92859 1461 aa40.15■■■■■ 4.02
TNFRSF4-201ENST00000379236 KDM4FA0A1W2PPD8 638 aa40.13■■■■■ 4.01
TNFRSF4-201ENST00000379236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.11■■■■■ 4.01
TNFRSF4-201ENST00000379236 CFAP74Q9C0B2 1584 aa40.1■■■■■ 4.01
TNFRSF4-201ENST00000379236 TTC37Q6PGP7 1564 aa40.1■■■■■ 4.01
TNFRSF4-201ENST00000379236 ADGRL1O94910 1474 aa40.08■■■■■ 4.01
TNFRSF4-201ENST00000379236 CDK11AQ9UQ88 783 aaPredicted RBP40.07■■■■■ 4.01
TNFRSF4-201ENST00000379236 LRRIQ1Q96JM4 1722 aa40.05■■■■■ 4
TNFRSF4-201ENST00000379236 PCF11O94913 1555 aaKnown RBP40.01■■■■□ 3.99
TNFRSF4-201ENST00000379236 FANCAO15360 1455 aa39.98■■■■□ 3.99
TNFRSF4-201ENST00000379236 CLIP1P30622 1438 aa39.98■■■■□ 3.99
TNFRSF4-201ENST00000379236 KIF14Q15058 1648 aa39.97■■■■□ 3.99
TNFRSF4-201ENST00000379236 MYO5CQ9NQX4 1742 aa39.96■■■■□ 3.99
TNFRSF4-201ENST00000379236 CASKIN1Q8WXD9 1431 aa39.93■■■■□ 3.98
TNFRSF4-201ENST00000379236 RAPGEF3O95398 923 aa39.93■■■■□ 3.98
TNFRSF4-201ENST00000379236 AKNAQ7Z591 1439 aa39.92■■■■□ 3.98
TNFRSF4-201ENST00000379236 CCDC18Q5T9S5 1454 aa39.92■■■■□ 3.98
TNFRSF4-201ENST00000379236 FRMPD1Q5SYB0 1578 aa39.9■■■■□ 3.98
TNFRSF4-201ENST00000379236 TROQ12816 1431 aaPredicted RBP39.89■■■■□ 3.98
TNFRSF4-201ENST00000379236 DENND4BO75064 1496 aaPredicted RBP39.88■■■■□ 3.98
TNFRSF4-201ENST00000379236 RICTORQ6R327 1708 aa39.88■■■■□ 3.97
TNFRSF4-201ENST00000379236 FYCO1Q9BQS8 1478 aa39.86■■■■□ 3.97
TNFRSF4-201ENST00000379236 PLCH2O75038 1416 aa39.83■■■■□ 3.97
TNFRSF4-201ENST00000379236 ARHGAP5Q13017 1502 aa39.72■■■■□ 3.95
TNFRSF4-201ENST00000379236 ARHGEF40Q8TER5 1519 aa39.72■■■■□ 3.95
TNFRSF4-201ENST00000379236 EFCAB2Q5VUJ9 269 aa39.71■■■■□ 3.95
TNFRSF4-201ENST00000379236 SCAPERQ9BY12 1400 aa39.68■■■■□ 3.94
TNFRSF4-201ENST00000379236 ZMYM4Q5VZL5 1548 aa39.68■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms