RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
PCNA-202ENST00000379160 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
PCNA-202ENST00000379160 NUP160Q12769 1436 aa24.24■■□□□ 1.47
PCNA-202ENST00000379160 ERICH3Q5RHP9 1530 aa24.24■■□□□ 1.47
PCNA-202ENST00000379160 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
PCNA-202ENST00000379160 SHROOM2Q13796 1616 aa24.14■■□□□ 1.45
PCNA-202ENST00000379160 PRG4Q92954 1404 aaPredicted RBP24.04■■□□□ 1.44
PCNA-202ENST00000379160 JPH4Q96JJ6 628 aa24.03■■□□□ 1.44
PCNA-202ENST00000379160 RUSC2Q8N2Y8 1516 aa23.99■■□□□ 1.43
PCNA-202ENST00000379160 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
PCNA-202ENST00000379160 IGF1RP08069 1367 aa23.96■■□□□ 1.43
PCNA-202ENST00000379160 CUL7Q14999 1698 aa23.91■■□□□ 1.42
PCNA-202ENST00000379160 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
PCNA-202ENST00000379160 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
PCNA-202ENST00000379160 CARMIL1Q5VZK9 1371 aa23.81■■□□□ 1.4
PCNA-202ENST00000379160 NPM1P06748 294 aaKnown RBP eCLIP23.78■■□□□ 1.4
PCNA-202ENST00000379160 ADCY10Q96PN6 1610 aa23.77■■□□□ 1.4
PCNA-202ENST00000379160 FAM69CQ0P6D2 419 aa23.72■■□□□ 1.39
PCNA-202ENST00000379160 TTBK1Q5TCY1 1321 aaPredicted RBP23.71■■□□□ 1.39
PCNA-202ENST00000379160 MAPKBP1O60336 1514 aa23.7■■□□□ 1.38
PCNA-202ENST00000379160 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
PCNA-202ENST00000379160 PTPRGP23470 1445 aa23.66■■□□□ 1.38
PCNA-202ENST00000379160 IQGAP2Q13576 1575 aa23.65■■□□□ 1.38
PCNA-202ENST00000379160 DIP2BQ9P265 1576 aa23.64■■□□□ 1.37
PCNA-202ENST00000379160 CARMIL2Q6F5E8 1435 aa23.64■■□□□ 1.37
PCNA-202ENST00000379160 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
PCNA-202ENST00000379160 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
PCNA-202ENST00000379160 RAPGEF2Q9Y4G8 1499 aa23.58■■□□□ 1.37
PCNA-202ENST00000379160 PPP4R3CPQ6ZMV5 832 aa23.56■■□□□ 1.36
PCNA-202ENST00000379160 TSPOAP1O95153 1857 aa23.54■■□□□ 1.36
PCNA-202ENST00000379160 DISP1Q96F81 1524 aa23.54■■□□□ 1.36
PCNA-202ENST00000379160 ABCC2Q92887 1545 aa23.52■■□□□ 1.36
PCNA-202ENST00000379160 UGGT2Q9NYU1 1516 aa23.48■■□□□ 1.35
PCNA-202ENST00000379160 UACAQ9BZF9 1416 aa23.48■■□□□ 1.35
PCNA-202ENST00000379160 UHRF1BP1LA0JNW5 1464 aa23.46■■□□□ 1.35
PCNA-202ENST00000379160 ASXL2Q76L83 1435 aa23.45■■□□□ 1.35
PCNA-202ENST00000379160 KDM6BO15054 1643 aa23.45■■□□□ 1.34
PCNA-202ENST00000379160 KIAA0556O60303 1618 aa23.44■■□□□ 1.34
PCNA-202ENST00000379160 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
PCNA-202ENST00000379160 CTTNBP2Q8WZ74 1663 aa23.41■■□□□ 1.34
PCNA-202ENST00000379160 KDM5BQ9UGL1 1544 aa23.37■■□□□ 1.33
PCNA-202ENST00000379160 GLI2P10070 1586 aa23.36■■□□□ 1.33
PCNA-202ENST00000379160 ZCCHC11Q5TAX3 1644 aaKnown RBP23.35■■□□□ 1.33
PCNA-202ENST00000379160 PRXQ9BXM0 1461 aa23.33■■□□□ 1.33
PCNA-202ENST00000379160 PPRC1Q5VV67 1664 aaKnown RBP23.33■■□□□ 1.32
PCNA-202ENST00000379160 EPRSP07814 1512 aaKnown RBP23.3■■□□□ 1.32
PCNA-202ENST00000379160 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
PCNA-202ENST00000379160 MAP3K4Q9Y6R4 1608 aa23.25■■□□□ 1.31
PCNA-202ENST00000379160 WDR7Q9Y4E6 1490 aa23.22■■□□□ 1.31
PCNA-202ENST00000379160 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
PCNA-202ENST00000379160 ABCA8O94911 1581 aa23.22■■□□□ 1.31
PCNA-202ENST00000379160 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
PCNA-202ENST00000379160 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
PCNA-202ENST00000379160 COL17A1Q9UMD9 1497 aaPredicted RBP23.18■■□□□ 1.3
PCNA-202ENST00000379160 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
PCNA-202ENST00000379160 KCNH8Q96L42 1107 aa23.16■■□□□ 1.3
PCNA-202ENST00000379160 NCBP3Q53F19 620 aaKnown RBP23.15■■□□□ 1.3
PCNA-202ENST00000379160 ARID3CA6NKF2 412 aa23.13■■□□□ 1.29
PCNA-202ENST00000379160 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
PCNA-202ENST00000379160 CD109Q6YHK3 1445 aa23.09■■□□□ 1.29
PCNA-202ENST00000379160 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
PCNA-202ENST00000379160 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
PCNA-202ENST00000379160 RANGAP1P46060 587 aaPredicted RBP23.05■■□□□ 1.28
PCNA-202ENST00000379160 MAGI3Q5TCQ9 1506 aa23.04■■□□□ 1.28
PCNA-202ENST00000379160 ATP10BO94823 1461 aa23.04■■□□□ 1.28
PCNA-202ENST00000379160 ADGRL1O94910 1474 aa23.04■■□□□ 1.28
PCNA-202ENST00000379160 EEA1Q15075 1411 aa23.03■■□□□ 1.28
PCNA-202ENST00000379160 CNKSR2Q8WXI2 1034 aa23.01■■□□□ 1.27
PCNA-202ENST00000379160 RAPGEF6Q8TEU7 1601 aa22.98■■□□□ 1.27
PCNA-202ENST00000379160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
PCNA-202ENST00000379160 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
PCNA-202ENST00000379160 FHOD3Q2V2M9 1422 aa22.93■■□□□ 1.26
PCNA-202ENST00000379160 MAPK8IP2Q13387 824 aaPredicted RBP22.92■■□□□ 1.26
PCNA-202ENST00000379160 KCNA4P22459 653 aa22.91■■□□□ 1.26
PCNA-202ENST00000379160 ABCA9Q8IUA7 1624 aa22.9■■□□□ 1.26
PCNA-202ENST00000379160 NUP153P49790 1475 aaKnown RBP22.9■■□□□ 1.26
PCNA-202ENST00000379160 DMRT2Q9Y5R5 561 aa22.89■■□□□ 1.26
PCNA-202ENST00000379160 KIF21BO75037 1637 aa22.88■■□□□ 1.25
PCNA-202ENST00000379160 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
PCNA-202ENST00000379160 EHMT2Q96KQ7 1210 aa22.86■■□□□ 1.25
PCNA-202ENST00000379160 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
PCNA-202ENST00000379160 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
PCNA-202ENST00000379160 PLEKHD1A6NEE1 506 aa22.79■■□□□ 1.24
PCNA-202ENST00000379160 RAPGEF3O95398 923 aa22.78■■□□□ 1.24
PCNA-202ENST00000379160 UBTFP17480 764 aaKnown RBP22.77■■□□□ 1.24
PCNA-202ENST00000379160 NEO1Q92859 1461 aa22.77■■□□□ 1.24
PCNA-202ENST00000379160 HECW2Q9P2P5 1572 aa22.72■■□□□ 1.23
PCNA-202ENST00000379160 FRMPD1Q5SYB0 1578 aa22.69■■□□□ 1.22
PCNA-202ENST00000379160 CDK13Q14004 1512 aaKnown RBP22.69■■□□□ 1.22
PCNA-202ENST00000379160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.69■■□□□ 1.221e-10■■■■□ 24.1
PCNA-202ENST00000379160 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
PCNA-202ENST00000379160 TTC37Q6PGP7 1564 aa22.66■■□□□ 1.22
PCNA-202ENST00000379160 FANCAO15360 1455 aa22.66■■□□□ 1.22
PCNA-202ENST00000379160 AKNAQ7Z591 1439 aa22.65■■□□□ 1.22
PCNA-202ENST00000379160 DENND4BO75064 1496 aaPredicted RBP22.64■■□□□ 1.21
PCNA-202ENST00000379160 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.21
PCNA-202ENST00000379160 FMN1Q68DA7 1419 aa22.63■■□□□ 1.21
PCNA-202ENST00000379160 CFAP74Q9C0B2 1584 aa22.62■■□□□ 1.21
PCNA-202ENST00000379160 ARID4BQ4LE39 1312 aaPredicted RBP22.62■■□□□ 1.21
PCNA-202ENST00000379160 RICTORQ6R327 1708 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms