RNA–Protein interactions for RNA: ENST00000378792.1

CCL21-202, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CCL21, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-202ENST00000378792 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
CCL21-202ENST00000378792 PRG4Q92954 1404 aaPredicted RBP18.21■□□□□ 0.51
CCL21-202ENST00000378792 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
CCL21-202ENST00000378792 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
CCL21-202ENST00000378792 EEA1Q15075 1411 aa18.13■□□□□ 0.49
CCL21-202ENST00000378792 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
CCL21-202ENST00000378792 IQGAP2Q13576 1575 aa18.09■□□□□ 0.49
CCL21-202ENST00000378792 TRHP20396 242 aaPredicted RBP18.09■□□□□ 0.49
CCL21-202ENST00000378792 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
CCL21-202ENST00000378792 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
CCL21-202ENST00000378792 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCL21-202ENST00000378792 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
CCL21-202ENST00000378792 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.47
CCL21-202ENST00000378792 PTPRGP23470 1445 aa18.01■□□□□ 0.47
CCL21-202ENST00000378792 UGGT2Q9NYU1 1516 aa18■□□□□ 0.47
CCL21-202ENST00000378792 CTTNBP2Q8WZ74 1663 aa17.97■□□□□ 0.47
CCL21-202ENST00000378792 GOLGA3Q08378 1498 aa17.96■□□□□ 0.47
CCL21-202ENST00000378792 FAM9AQ8IZU1 332 aaPredicted RBP17.96■□□□□ 0.47
CCL21-202ENST00000378792 DISP1Q96F81 1524 aa17.94■□□□□ 0.46
CCL21-202ENST00000378792 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
CCL21-202ENST00000378792 KIAA0556O60303 1618 aa17.9■□□□□ 0.46
CCL21-202ENST00000378792 ADCY10Q96PN6 1610 aa17.89■□□□□ 0.45
CCL21-202ENST00000378792 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
CCL21-202ENST00000378792 AEBP2Q6ZN18 517 aaPredicted RBP17.87■□□□□ 0.45
CCL21-202ENST00000378792 UHRF1BP1LA0JNW5 1464 aa17.87■□□□□ 0.45
CCL21-202ENST00000378792 MAPKBP1O60336 1514 aa17.87■□□□□ 0.45
CCL21-202ENST00000378792 KIF21BO75037 1637 aa17.85■□□□□ 0.45
CCL21-202ENST00000378792 ABCC2Q92887 1545 aa17.84■□□□□ 0.45
CCL21-202ENST00000378792 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
CCL21-202ENST00000378792 FAM69CQ0P6D2 419 aa17.79■□□□□ 0.44
CCL21-202ENST00000378792 PLB1Q6P1J6 1458 aa17.77■□□□□ 0.44
CCL21-202ENST00000378792 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
CCL21-202ENST00000378792 KDM5BQ9UGL1 1544 aa17.76■□□□□ 0.43
CCL21-202ENST00000378792 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
CCL21-202ENST00000378792 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
CCL21-202ENST00000378792 ASXL2Q76L83 1435 aa17.73■□□□□ 0.43
CCL21-202ENST00000378792 KIF13AQ9H1H9 1805 aa17.72■□□□□ 0.43
CCL21-202ENST00000378792 DIP2BQ9P265 1576 aa17.72■□□□□ 0.43
CCL21-202ENST00000378792 ABCA8O94911 1581 aa17.71■□□□□ 0.43
CCL21-202ENST00000378792 RANGAP1P46060 587 aaPredicted RBP17.7■□□□□ 0.42
CCL21-202ENST00000378792 EFCAB5A4FU69 1503 aa17.7■□□□□ 0.42
CCL21-202ENST00000378792 ZCCHC11Q5TAX3 1644 aaKnown RBP17.69■□□□□ 0.42
CCL21-202ENST00000378792 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
CCL21-202ENST00000378792 GLI2P10070 1586 aa17.65■□□□□ 0.42
CCL21-202ENST00000378792 WDR7Q9Y4E6 1490 aa17.64■□□□□ 0.41
CCL21-202ENST00000378792 FHOD3Q2V2M9 1422 aa17.63■□□□□ 0.41
CCL21-202ENST00000378792 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
CCL21-202ENST00000378792 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
CCL21-202ENST00000378792 ATP10BO94823 1461 aa17.58■□□□□ 0.41
CCL21-202ENST00000378792 FMN1Q68DA7 1419 aa17.58■□□□□ 0.41
CCL21-202ENST00000378792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.4
CCL21-202ENST00000378792 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.4
CCL21-202ENST00000378792 KCNH8Q96L42 1107 aa17.56■□□□□ 0.4
CCL21-202ENST00000378792 TSPOAP1O95153 1857 aa17.55■□□□□ 0.4
CCL21-202ENST00000378792 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
CCL21-202ENST00000378792 ARID3CA6NKF2 412 aa17.54■□□□□ 0.4
CCL21-202ENST00000378792 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
CCL21-202ENST00000378792 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
CCL21-202ENST00000378792 MAP3K4Q9Y6R4 1608 aa17.52■□□□□ 0.4
CCL21-202ENST00000378792 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.4
CCL21-202ENST00000378792 KDM6BO15054 1643 aa17.5■□□□□ 0.39
CCL21-202ENST00000378792 CD109Q6YHK3 1445 aa17.5■□□□□ 0.39
CCL21-202ENST00000378792 CFAP43Q8NDM7 1665 aa17.49■□□□□ 0.39
CCL21-202ENST00000378792 MAGI3Q5TCQ9 1506 aa17.47■□□□□ 0.39
CCL21-202ENST00000378792 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
CCL21-202ENST00000378792 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
CCL21-202ENST00000378792 HECW1Q76N89 1606 aa17.46■□□□□ 0.39
CCL21-202ENST00000378792 PPRC1Q5VV67 1664 aaKnown RBP17.45■□□□□ 0.38
CCL21-202ENST00000378792 CLIP1P30622 1438 aa17.45■□□□□ 0.38
CCL21-202ENST00000378792 PHLDB1Q86UU1 1377 aa17.41■□□□□ 0.38
CCL21-202ENST00000378792 ABCA9Q8IUA7 1624 aa17.41■□□□□ 0.38
CCL21-202ENST00000378792 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
CCL21-202ENST00000378792 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
CCL21-202ENST00000378792 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
CCL21-202ENST00000378792 NEO1Q92859 1461 aa17.34■□□□□ 0.37
CCL21-202ENST00000378792 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
CCL21-202ENST00000378792 COL17A1Q9UMD9 1497 aaPredicted RBP17.32■□□□□ 0.36
CCL21-202ENST00000378792 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
CCL21-202ENST00000378792 CEP162Q5TB80 1403 aa17.31■□□□□ 0.36
CCL21-202ENST00000378792 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
CCL21-202ENST00000378792 TROQ12816 1431 aaPredicted RBP17.3■□□□□ 0.36
CCL21-202ENST00000378792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCL21-202ENST00000378792 CFAP74Q9C0B2 1584 aa17.28■□□□□ 0.36
CCL21-202ENST00000378792 KIF14Q15058 1648 aa17.27■□□□□ 0.36
CCL21-202ENST00000378792 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
CCL21-202ENST00000378792 FANCAO15360 1455 aa17.25■□□□□ 0.35
CCL21-202ENST00000378792 PLCH2O75038 1416 aa17.25■□□□□ 0.35
CCL21-202ENST00000378792 TTC37Q6PGP7 1564 aa17.24■□□□□ 0.35
CCL21-202ENST00000378792 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
CCL21-202ENST00000378792 EFCAB2Q5VUJ9 269 aa17.24■□□□□ 0.35
CCL21-202ENST00000378792 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
CCL21-202ENST00000378792 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
CCL21-202ENST00000378792 MYO5CQ9NQX4 1742 aa17.19■□□□□ 0.34
CCL21-202ENST00000378792 RAPGEF3O95398 923 aa17.19■□□□□ 0.34
CCL21-202ENST00000378792 MTUS2Q5JR59 1369 aa17.17■□□□□ 0.34
CCL21-202ENST00000378792 ADGRL1O94910 1474 aa17.17■□□□□ 0.34
CCL21-202ENST00000378792 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
CCL21-202ENST00000378792 SCAPERQ9BY12 1400 aa17.14■□□□□ 0.33
CCL21-202ENST00000378792 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
CCL21-202ENST00000378792 KDM4FA0A1W2PPD8 638 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms