RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
OPTN-202ENST00000378747 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.29
OPTN-202ENST00000378747 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
OPTN-202ENST00000378747 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
OPTN-202ENST00000378747 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
OPTN-202ENST00000378747 LAMC3Q9Y6N6 1575 aa13.26□□□□□ -0.29
OPTN-202ENST00000378747 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
OPTN-202ENST00000378747 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
OPTN-202ENST00000378747 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
OPTN-202ENST00000378747 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
OPTN-202ENST00000378747 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
OPTN-202ENST00000378747 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
OPTN-202ENST00000378747 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
OPTN-202ENST00000378747 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
OPTN-202ENST00000378747 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
OPTN-202ENST00000378747 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
OPTN-202ENST00000378747 APLP2Q06481 763 aa13.22□□□□□ -0.29
OPTN-202ENST00000378747 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
OPTN-202ENST00000378747 MIER1Q8N108 512 aa13.17□□□□□ -0.3
OPTN-202ENST00000378747 PHLDB1Q86UU1 1377 aa13.17□□□□□ -0.3
OPTN-202ENST00000378747 URB2Q14146 1524 aaKnown RBP13.16□□□□□ -0.3
OPTN-202ENST00000378747 TARBP1Q13395 1621 aaKnown RBP13.16□□□□□ -0.3
OPTN-202ENST00000378747 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
OPTN-202ENST00000378747 SETD5Q9C0A6 1442 aa13.14□□□□□ -0.31
OPTN-202ENST00000378747 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
OPTN-202ENST00000378747 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
OPTN-202ENST00000378747 RAD54L2Q9Y4B4 1467 aa13.13□□□□□ -0.31
OPTN-202ENST00000378747 TIMELESSQ9UNS1 1208 aa13.09□□□□□ -0.31
OPTN-202ENST00000378747 FMN1Q68DA7 1419 aa13.08□□□□□ -0.32
OPTN-202ENST00000378747 KDM5BQ9UGL1 1544 aa13.08□□□□□ -0.32
OPTN-202ENST00000378747 PBRM1Q86U86 1689 aa13.07□□□□□ -0.32
OPTN-202ENST00000378747 GCC2Q8IWJ2 1684 aa13.07□□□□□ -0.32
OPTN-202ENST00000378747 NESP48681 1621 aa13.07□□□□□ -0.32
OPTN-202ENST00000378747 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
OPTN-202ENST00000378747 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
OPTN-202ENST00000378747 UGGT2Q9NYU1 1516 aa13.05□□□□□ -0.32
OPTN-202ENST00000378747 EHBP1L1Q8N3D4 1523 aa13.05□□□□□ -0.32
OPTN-202ENST00000378747 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
OPTN-202ENST00000378747 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
OPTN-202ENST00000378747 FGD6Q6ZV73 1430 aa13.04□□□□□ -0.32
OPTN-202ENST00000378747 YTHDC1Q96MU7 727 aaKnown RBP13.04□□□□□ -0.32
OPTN-202ENST00000378747 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
OPTN-202ENST00000378747 AKNAQ7Z591 1439 aa13.02□□□□□ -0.33
OPTN-202ENST00000378747 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
OPTN-202ENST00000378747 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
OPTN-202ENST00000378747 MAGI3Q5TCQ9 1506 aa13□□□□□ -0.33
OPTN-202ENST00000378747 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
OPTN-202ENST00000378747 CCDC18Q5T9S5 1454 aa12.99□□□□□ -0.33
OPTN-202ENST00000378747 PTPRKQ15262 1439 aa12.99□□□□□ -0.33
OPTN-202ENST00000378747 UACAQ9BZF9 1416 aa12.97□□□□□ -0.33
OPTN-202ENST00000378747 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
OPTN-202ENST00000378747 NCOA2Q15596 1464 aa12.96□□□□□ -0.34
OPTN-202ENST00000378747 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.34
OPTN-202ENST00000378747 DENND4BO75064 1496 aaPredicted RBP12.96□□□□□ -0.34
OPTN-202ENST00000378747 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
OPTN-202ENST00000378747 WDR62O43379 1518 aa12.95□□□□□ -0.34
OPTN-202ENST00000378747 NAIPQ13075 1403 aa12.94□□□□□ -0.34
OPTN-202ENST00000378747 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
OPTN-202ENST00000378747 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
OPTN-202ENST00000378747 POLR1AO95602 1720 aaPredicted RBP12.89□□□□□ -0.35
OPTN-202ENST00000378747 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
OPTN-202ENST00000378747 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
OPTN-202ENST00000378747 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
OPTN-202ENST00000378747 KDM6BO15054 1643 aa12.85□□□□□ -0.35
OPTN-202ENST00000378747 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
OPTN-202ENST00000378747 KIAA0556O60303 1618 aa12.85□□□□□ -0.35
OPTN-202ENST00000378747 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
OPTN-202ENST00000378747 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
OPTN-202ENST00000378747 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
OPTN-202ENST00000378747 DISP1Q96F81 1524 aa12.82□□□□□ -0.36
OPTN-202ENST00000378747 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
OPTN-202ENST00000378747 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
OPTN-202ENST00000378747 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
OPTN-202ENST00000378747 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
OPTN-202ENST00000378747 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
OPTN-202ENST00000378747 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
OPTN-202ENST00000378747 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
OPTN-202ENST00000378747 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
OPTN-202ENST00000378747 RAPGEF6Q8TEU7 1601 aa12.78□□□□□ -0.36
OPTN-202ENST00000378747 KIAA0586Q9BVV6 1533 aa12.78□□□□□ -0.36
OPTN-202ENST00000378747 MYT1Q01538 1121 aa12.77□□□□□ -0.36
OPTN-202ENST00000378747 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.37
OPTN-202ENST00000378747 FAM50AQ14320 339 aaKnown RBP12.75□□□□□ -0.37
OPTN-202ENST00000378747 ITSN2Q9NZM3 1697 aa12.75□□□□□ -0.37
OPTN-202ENST00000378747 NUP153P49790 1475 aaKnown RBP12.75□□□□□ -0.37
OPTN-202ENST00000378747 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
OPTN-202ENST00000378747 CDK13Q14004 1512 aaKnown RBP12.74□□□□□ -0.37
OPTN-202ENST00000378747 TEX14Q8IWB6 1497 aa12.74□□□□□ -0.37
OPTN-202ENST00000378747 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
OPTN-202ENST00000378747 ADGRL2O95490 1459 aa12.74□□□□□ -0.37
OPTN-202ENST00000378747 MBD5Q9P267 1494 aa12.73□□□□□ -0.37
OPTN-202ENST00000378747 ITGAEP38570 1179 aa12.72□□□□□ -0.37
OPTN-202ENST00000378747 DAPK1P53355 1430 aa12.71□□□□□ -0.37
OPTN-202ENST00000378747 RPRD2Q5VT52 1461 aaKnown RBP12.71□□□□□ -0.37
OPTN-202ENST00000378747 KCNH8Q96L42 1107 aa12.7□□□□□ -0.38
OPTN-202ENST00000378747 GRIN2AQ12879 1464 aa12.7□□□□□ -0.38
OPTN-202ENST00000378747 SPATA31E1Q6ZUB1 1445 aa12.7□□□□□ -0.38
OPTN-202ENST00000378747 ABCC5O15440 1437 aa12.69□□□□□ -0.38
OPTN-202ENST00000378747 CEP170Q5SW79 1584 aa12.69□□□□□ -0.38
OPTN-202ENST00000378747 MAGI1Q96QZ7 1491 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms