RNA–Protein interactions for RNA: ENST00000378723.7

DMD-212, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 4,645 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-212ENST00000378723 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
DMD-212ENST00000378723 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.21
DMD-212ENST00000378723 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
DMD-212ENST00000378723 MRC2Q9UBG0 1479 aa13.73□□□□□ -0.21
DMD-212ENST00000378723 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
DMD-212ENST00000378723 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
DMD-212ENST00000378723 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
DMD-212ENST00000378723 CHIC2Q9UKJ5 165 aa13.68□□□□□ -0.22
DMD-212ENST00000378723 FMN1Q68DA7 1419 aa13.67□□□□□ -0.22
DMD-212ENST00000378723 CCNB3Q8WWL7 1395 aa13.66□□□□□ -0.22
DMD-212ENST00000378723 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
DMD-212ENST00000378723 PLEKHD1A6NEE1 506 aa13.62□□□□□ -0.23
DMD-212ENST00000378723 GRIN2BQ13224 1484 aa13.62□□□□□ -0.23
DMD-212ENST00000378723 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
DMD-212ENST00000378723 DIEXFQ68CQ4 756 aaKnown RBP13.61□□□□□ -0.23
DMD-212ENST00000378723 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
DMD-212ENST00000378723 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
DMD-212ENST00000378723 CARMIL2Q6F5E8 1435 aa13.58□□□□□ -0.23
DMD-212ENST00000378723 RRP7BPQ9NSQ0 103 aa13.57□□□□□ -0.24
DMD-212ENST00000378723 ZNF316A6NFI3 1004 aaPredicted RBP13.56□□□□□ -0.24
DMD-212ENST00000378723 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
DMD-212ENST00000378723 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
DMD-212ENST00000378723 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
DMD-212ENST00000378723 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
DMD-212ENST00000378723 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
DMD-212ENST00000378723 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
DMD-212ENST00000378723 TSPY4P0CV99 314 aa13.51□□□□□ -0.25
DMD-212ENST00000378723 TSPY10P0CW01 314 aa13.51□□□□□ -0.25
DMD-212ENST00000378723 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
DMD-212ENST00000378723 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
DMD-212ENST00000378723 ZNF608Q9ULD9 1512 aaPredicted RBP13.5□□□□□ -0.25
DMD-212ENST00000378723 CUL7Q14999 1698 aa13.49□□□□□ -0.25
DMD-212ENST00000378723 CASKIN1Q8WXD9 1431 aa13.46□□□□□ -0.25
DMD-212ENST00000378723 EFCAB5A4FU69 1503 aa13.46□□□□□ -0.25
DMD-212ENST00000378723 POLR3GLQ9BT43 218 aa13.46□□□□□ -0.25
DMD-212ENST00000378723 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
DMD-212ENST00000378723 ZNF326Q5BKZ1 582 aaKnown RBP13.45□□□□□ -0.26
DMD-212ENST00000378723 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
DMD-212ENST00000378723 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
DMD-212ENST00000378723 FYCO1Q9BQS8 1478 aa13.42□□□□□ -0.26
DMD-212ENST00000378723 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
DMD-212ENST00000378723 RAB3GAP2Q9H2M9 1393 aa13.42□□□□□ -0.26
DMD-212ENST00000378723 PTPRGP23470 1445 aa13.4□□□□□ -0.26
DMD-212ENST00000378723 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.26
DMD-212ENST00000378723 CCDC18Q5T9S5 1454 aa13.4□□□□□ -0.26
DMD-212ENST00000378723 SIN3AQ96ST3 1273 aa13.4□□□□□ -0.27
DMD-212ENST00000378723 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.27
DMD-212ENST00000378723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
DMD-212ENST00000378723 KIAA0586Q9BVV6 1533 aa13.38□□□□□ -0.27
DMD-212ENST00000378723 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
DMD-212ENST00000378723 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
DMD-212ENST00000378723 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
DMD-212ENST00000378723 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
DMD-212ENST00000378723 MAGI1Q96QZ7 1491 aaPredicted RBP13.35□□□□□ -0.27
DMD-212ENST00000378723 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
DMD-212ENST00000378723 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
DMD-212ENST00000378723 RRBP1Q9P2E9 1410 aaKnown RBP13.33□□□□□ -0.27
DMD-212ENST00000378723 WDR62O43379 1518 aa13.33□□□□□ -0.28
DMD-212ENST00000378723 FGD6Q6ZV73 1430 aa13.33□□□□□ -0.28
DMD-212ENST00000378723 PRG4Q92954 1404 aaPredicted RBP13.32□□□□□ -0.28
DMD-212ENST00000378723 NCOA2Q15596 1464 aa13.32□□□□□ -0.28
DMD-212ENST00000378723 MYOM3Q5VTT5 1437 aa13.31□□□□□ -0.28
DMD-212ENST00000378723 DHX57Q6P158 1386 aaKnown RBP13.31□□□□□ -0.28
DMD-212ENST00000378723 ABCA5Q8WWZ7 1642 aa13.3□□□□□ -0.28
DMD-212ENST00000378723 HIRIP3Q9BW71 556 aaPredicted RBP13.29□□□□□ -0.28
DMD-212ENST00000378723 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
DMD-212ENST00000378723 ACIN1Q9UKV3 1341 aaKnown RBP13.28□□□□□ -0.28
DMD-212ENST00000378723 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.28
DMD-212ENST00000378723 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
DMD-212ENST00000378723 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
DMD-212ENST00000378723 HNRNPMP52272 730 aaKnown RBP eCLIP13.27□□□□□ -0.29
DMD-212ENST00000378723 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
DMD-212ENST00000378723 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
DMD-212ENST00000378723 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
DMD-212ENST00000378723 CDK13Q14004 1512 aaKnown RBP13.25□□□□□ -0.29
DMD-212ENST00000378723 HECW1Q76N89 1606 aa13.25□□□□□ -0.29
DMD-212ENST00000378723 DDX10Q13206 875 aaKnown RBP13.25□□□□□ -0.29
DMD-212ENST00000378723 EPRSP07814 1512 aaKnown RBP13.25□□□□□ -0.29
DMD-212ENST00000378723 FOXD1Q16676 465 aa13.24□□□□□ -0.29
DMD-212ENST00000378723 EFCAB2Q5VUJ9 269 aa13.24□□□□□ -0.29
DMD-212ENST00000378723 EHBP1L1Q8N3D4 1523 aa13.24□□□□□ -0.29
DMD-212ENST00000378723 ANP32CO43423 234 aa13.24□□□□□ -0.29
DMD-212ENST00000378723 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
DMD-212ENST00000378723 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
DMD-212ENST00000378723 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
DMD-212ENST00000378723 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
DMD-212ENST00000378723 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
DMD-212ENST00000378723 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
DMD-212ENST00000378723 MIER1Q8N108 512 aa13.19□□□□□ -0.3
DMD-212ENST00000378723 TROQ12816 1431 aaPredicted RBP13.19□□□□□ -0.3
DMD-212ENST00000378723 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
DMD-212ENST00000378723 SUPT6HQ7KZ85 1726 aaKnown RBP13.18□□□□□ -0.3
DMD-212ENST00000378723 PKD2Q13563 968 aa13.17□□□□□ -0.3
DMD-212ENST00000378723 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
DMD-212ENST00000378723 RSPH4AQ5TD94 716 aa13.16□□□□□ -0.3
DMD-212ENST00000378723 EIF4G2P78344 907 aaKnown RBP eCLIP13.16□□□□□ -0.3
DMD-212ENST00000378723 NUP155O75694 1391 aa13.16□□□□□ -0.3
DMD-212ENST00000378723 UGGT2Q9NYU1 1516 aa13.15□□□□□ -0.3
DMD-212ENST00000378723 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
DMD-212ENST00000378723 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms