RNA–Protein interactions for RNA: ENST00000378677.6

DMD-207, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-207ENST00000378677 KIAA2012Q0VF49 1180 aa5.62□□□□□ -1.51
DMD-207ENST00000378677 NACADO15069 1562 aa5.62□□□□□ -1.51
DMD-207ENST00000378677 CCDC136Q96JN2 1154 aa5.61□□□□□ -1.51
DMD-207ENST00000378677 PKNOX2Q96KN3 472 aa5.61□□□□□ -1.51
DMD-207ENST00000378677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.61□□□□□ -1.51
DMD-207ENST00000378677 HNRNPUL2Q1KMD3 747 aaKnown RBP5.61□□□□□ -1.51
DMD-207ENST00000378677 PHF14O94880 888 aa5.61□□□□□ -1.51
DMD-207ENST00000378677 PTMAP06454 111 aaKnown RBP5.61□□□□□ -1.51
DMD-207ENST00000378677 SLC4A1APQ9BWU0 796 aaKnown RBP5.61□□□□□ -1.51
DMD-207ENST00000378677 HMGB1P09429 215 aaKnown RBP5.61□□□□□ -1.51
DMD-207ENST00000378677 HDAC5Q9UQL6 1122 aa5.6□□□□□ -1.51
DMD-207ENST00000378677 DHX8Q14562 1220 aaKnown RBP5.6□□□□□ -1.51
DMD-207ENST00000378677 HMGB3O15347 200 aaKnown RBP5.59□□□□□ -1.51
DMD-207ENST00000378677 GOLGA3Q08378 1498 aa5.59□□□□□ -1.51
DMD-207ENST00000378677 HMGB1P1B2RPK0 211 aaPredicted RBP5.59□□□□□ -1.51
DMD-207ENST00000378677 MSNP26038 577 aaKnown RBP5.59□□□□□ -1.51
DMD-207ENST00000378677 EIF4G2P78344 907 aaKnown RBP eCLIP5.59□□□□□ -1.512e-7■■■□□ 16.3
DMD-207ENST00000378677 PPARGC1BQ86YN6 1023 aaKnown RBP5.59□□□□□ -1.51
DMD-207ENST00000378677 RSF1Q96T23 1441 aaPredicted RBP5.59□□□□□ -1.51
DMD-207ENST00000378677 CSPP1Q1MSJ5 1256 aa5.59□□□□□ -1.52
DMD-207ENST00000378677 RSPH6AQ9H0K4 717 aa5.58□□□□□ -1.52
DMD-207ENST00000378677 GPS2Q13227 327 aa5.58□□□□□ -1.52
DMD-207ENST00000378677 CEP162Q5TB80 1403 aa5.58□□□□□ -1.52
DMD-207ENST00000378677 CSRNP3Q8WYN3 585 aa5.58□□□□□ -1.52
DMD-207ENST00000378677 DNTTIP2Q5QJE6 756 aaKnown RBP5.57□□□□□ -1.52
DMD-207ENST00000378677 PHLDB1Q86UU1 1377 aa5.57□□□□□ -1.52
DMD-207ENST00000378677 WWC1Q8IX03 1113 aa5.57□□□□□ -1.52
DMD-207ENST00000378677 BAZ1AQ9NRL2 1556 aaPredicted RBP5.57□□□□□ -1.52
DMD-207ENST00000378677 TNNT3P45378 269 aaPredicted RBP5.57□□□□□ -1.52
DMD-207ENST00000378677 KIF3AQ9Y496 699 aa5.57□□□□□ -1.52
DMD-207ENST00000378677 CEP164Q9UPV0 1460 aa5.57□□□□□ -1.52
DMD-207ENST00000378677 NPM2Q86SE8 214 aaKnown RBP5.57□□□□□ -1.52
DMD-207ENST00000378677 BAZ1BQ9UIG0 1483 aaKnown RBP5.56□□□□□ -1.52
DMD-207ENST00000378677 MAP7D2Q96T17 732 aa5.56□□□□□ -1.52
DMD-207ENST00000378677 MCCP23508 829 aa5.56□□□□□ -1.52
DMD-207ENST00000378677 CAGE1Q8TC20 777 aa5.56□□□□□ -1.52
DMD-207ENST00000378677 HMMRO75330 724 aa5.56□□□□□ -1.52
DMD-207ENST00000378677 NOM1Q5C9Z4 860 aaKnown RBP5.56□□□□□ -1.52
DMD-207ENST00000378677 WDR43Q15061 677 aaKnown RBP eCLIP5.56□□□□□ -1.52
DMD-207ENST00000378677 CFAP53Q96M91 514 aa5.55□□□□□ -1.52
DMD-207ENST00000378677 TPM4P67936 248 aa5.55□□□□□ -1.52
DMD-207ENST00000378677 CCDC70Q6NSX1 233 aa5.55□□□□□ -1.52
DMD-207ENST00000378677 TAF3Q5VWG9 929 aa5.55□□□□□ -1.52
DMD-207ENST00000378677 GBP4Q96PP9 640 aa5.55□□□□□ -1.52
DMD-207ENST00000378677 TRIM52Q96A61 297 aa5.55□□□□□ -1.52
DMD-207ENST00000378677 CCER2I3L3R5 266 aa5.54□□□□□ -1.52
DMD-207ENST00000378677 CNGB1Q14028 1251 aaPredicted RBP5.54□□□□□ -1.52
DMD-207ENST00000378677 LOC105371045A0A1W2PR82 267 aa5.54□□□□□ -1.52
DMD-207ENST00000378677 FAM50AQ14320 339 aaKnown RBP5.54□□□□□ -1.52
DMD-207ENST00000378677 TMC1Q8TDI8 760 aa5.53□□□□□ -1.52
DMD-207ENST00000378677 CDR1P51861 262 aa5.53□□□□□ -1.52
DMD-207ENST00000378677 FANCIQ9NVI1 1328 aa5.53□□□□□ -1.52
DMD-207ENST00000378677 CALD1Q05682 793 aaKnown RBP5.53□□□□□ -1.52
DMD-207ENST00000378677 ATP6V1DQ9Y5K8 247 aa5.53□□□□□ -1.52
DMD-207ENST00000378677 ESF1Q9H501 851 aaKnown RBP5.53□□□□□ -1.52
DMD-207ENST00000378677 AAMPQ13685 434 aa5.52□□□□□ -1.53
DMD-207ENST00000378677 NGEFQ8N5V2 710 aa5.52□□□□□ -1.53
DMD-207ENST00000378677 CWC15Q9P013 229 aaKnown RBP5.5□□□□□ -1.53
DMD-207ENST00000378677 TEX35Q5T0J7 233 aa5.5□□□□□ -1.53
DMD-207ENST00000378677 NAP1L5Q96NT1 182 aaPredicted RBP5.5□□□□□ -1.53
DMD-207ENST00000378677 ACBD3Q9H3P7 528 aa5.5□□□□□ -1.53
DMD-207ENST00000378677 SKOR2Q2VWA4 1001 aaPredicted RBP5.5□□□□□ -1.53
DMD-207ENST00000378677 RDXP35241 583 aaKnown RBP5.5□□□□□ -1.53
DMD-207ENST00000378677 IL27Q8NEV9 243 aa5.5□□□□□ -1.53
DMD-207ENST00000378677 HSCBQ8IWL3 235 aa5.5□□□□□ -1.53
DMD-207ENST00000378677 CAVIN1Q6NZI2 390 aaKnown RBP5.5□□□□□ -1.53
DMD-207ENST00000378677 FHAD1B1AJZ9 1412 aa5.49□□□□□ -1.53
DMD-207ENST00000378677 VPS8Q8N3P4 1428 aa5.49□□□□□ -1.53
DMD-207ENST00000378677 TPM3P06753 285 aa5.49□□□□□ -1.53
DMD-207ENST00000378677 HNRNPUQ00839 825 aaKnown RBP eCLIP5.49□□□□□ -1.53
DMD-207ENST00000378677 DCTN1Q14203 1278 aa5.49□□□□□ -1.53
DMD-207ENST00000378677 ROCK2O75116 1388 aaKnown RBP5.49□□□□□ -1.53
DMD-207ENST00000378677 NOC3LQ8WTT2 800 aaKnown RBP5.49□□□□□ -1.53
DMD-207ENST00000378677 NOP58Q9Y2X3 529 aaKnown RBP5.49□□□□□ -1.53
DMD-207ENST00000378677 TSPYL1Q9H0U9 437 aa5.49□□□□□ -1.53
DMD-207ENST00000378677 ISY1Q9ULR0 285 aaKnown RBP5.49□□□□□ -1.53
DMD-207ENST00000378677 CLIP1P30622 1438 aa5.48□□□□□ -1.53
DMD-207ENST00000378677 PDIA4P13667 645 aaKnown RBP5.48□□□□□ -1.53
DMD-207ENST00000378677 KIF16BQ96L93 1317 aa5.48□□□□□ -1.53
DMD-207ENST00000378677 HSP90B1P14625 803 aaKnown RBP5.48□□□□□ -1.53
DMD-207ENST00000378677 ITGAEP38570 1179 aa5.48□□□□□ -1.53
DMD-207ENST00000378677 FTSJ3Q8IY81 847 aaKnown RBP5.48□□□□□ -1.53
DMD-207ENST00000378677 DDX11L8A8MPP1 907 aa5.48□□□□□ -1.53
DMD-207ENST00000378677 PPP4R2Q9NY27 417 aa5.47□□□□□ -1.53
DMD-207ENST00000378677 CCDC66A2RUB6 948 aa5.47□□□□□ -1.53
DMD-207ENST00000378677 BCL11AQ9H165 835 aa5.47□□□□□ -1.53
DMD-207ENST00000378677 MYO6Q9UM54 1294 aa5.47□□□□□ -1.53
DMD-207ENST00000378677 EIF3AQ14152 1382 aaKnown RBP5.47□□□□□ -1.53
DMD-207ENST00000378677 USP8P40818 1118 aa5.47□□□□□ -1.53
DMD-207ENST00000378677 PES1O00541 588 aaKnown RBP5.47□□□□□ -1.53
DMD-207ENST00000378677 FKBP8Q14318 412 aa5.47□□□□□ -1.53
DMD-207ENST00000378677 INCENPQ9NQS7 918 aa5.46□□□□□ -1.53
DMD-207ENST00000378677 NUDCQ9Y266 331 aa5.46□□□□□ -1.54
DMD-207ENST00000378677 TXLNBQ8N3L3 684 aa5.46□□□□□ -1.54
DMD-207ENST00000378677 TPM1P09493 284 aa5.46□□□□□ -1.54
DMD-207ENST00000378677 NEXNQ0ZGT2 675 aa5.46□□□□□ -1.54
DMD-207ENST00000378677 NAP1L2Q9ULW6 460 aaPredicted RBP5.46□□□□□ -1.54
DMD-207ENST00000378677 IPO8O15397 1037 aaKnown RBP5.45□□□□□ -1.54
DMD-207ENST00000378677 LRRFIP1Q32MZ4 808 aaKnown RBP5.45□□□□□ -1.54
DMD-207ENST00000378677 TCERG1O14776 1098 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms