RNA–Protein interactions for RNA: ENST00000378673.2

GDF9-202, Transcript of growth differentiation factor 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GDF9, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-202ENST00000378673 ANP32EQ9BTT0 268 aa10.47□□□□□ -0.73
GDF9-202ENST00000378673 ERCC6Q03468 1493 aa10.46□□□□□ -0.73
GDF9-202ENST00000378673 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.74
GDF9-202ENST00000378673 TOP2AP11388 1531 aaKnown RBP10.44□□□□□ -0.74
GDF9-202ENST00000378673 EEA1Q15075 1411 aa10.43□□□□□ -0.74
GDF9-202ENST00000378673 RNF216Q9NWF9 866 aaPredicted RBP10.43□□□□□ -0.74
GDF9-202ENST00000378673 NEFLP07196 543 aa10.42□□□□□ -0.74
GDF9-202ENST00000378673 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
GDF9-202ENST00000378673 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
GDF9-202ENST00000378673 CEP162Q5TB80 1403 aa10.42□□□□□ -0.74
GDF9-202ENST00000378673 MYCNP04198 464 aaPredicted RBP10.41□□□□□ -0.74
GDF9-202ENST00000378673 GTF3C3Q9Y5Q9 886 aa10.4□□□□□ -0.74
GDF9-202ENST00000378673 C14orf37Q86TY3 774 aa10.39□□□□□ -0.75
GDF9-202ENST00000378673 CCDC88BA6NC98 1476 aa10.38□□□□□ -0.75
GDF9-202ENST00000378673 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
GDF9-202ENST00000378673 CHMP4AQ9BY43 222 aa10.35□□□□□ -0.75
GDF9-202ENST00000378673 ZNF316A6NFI3 1004 aaPredicted RBP10.35□□□□□ -0.75
GDF9-202ENST00000378673 FBLN2P98095 1184 aa10.35□□□□□ -0.75
GDF9-202ENST00000378673 MAPK8IP2Q13387 824 aaPredicted RBP10.35□□□□□ -0.75
GDF9-202ENST00000378673 KIF21AQ7Z4S6 1674 aa10.34□□□□□ -0.75
GDF9-202ENST00000378673 BCL11BQ9C0K0 894 aaPredicted RBP10.34□□□□□ -0.75
GDF9-202ENST00000378673 LAMC3Q9Y6N6 1575 aa10.33□□□□□ -0.76
GDF9-202ENST00000378673 GOLGA3Q08378 1498 aa10.32□□□□□ -0.76
GDF9-202ENST00000378673 CADPSQ9ULU8 1353 aa10.32□□□□□ -0.76
GDF9-202ENST00000378673 SOGA1O94964 1423 aa10.31□□□□□ -0.76
GDF9-202ENST00000378673 TAF7LQ5H9L4 462 aa10.3□□□□□ -0.76
GDF9-202ENST00000378673 DHX37Q8IY37 1157 aaKnown RBP10.29□□□□□ -0.76
GDF9-202ENST00000378673 FGD1P98174 961 aa10.28□□□□□ -0.76
GDF9-202ENST00000378673 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
GDF9-202ENST00000378673 KIF21BO75037 1637 aa10.27□□□□□ -0.76
GDF9-202ENST00000378673 FBXO3Q9UK99 471 aa10.27□□□□□ -0.76
GDF9-202ENST00000378673 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
GDF9-202ENST00000378673 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
GDF9-202ENST00000378673 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
GDF9-202ENST00000378673 CUX2O14529 1486 aa10.24□□□□□ -0.77
GDF9-202ENST00000378673 FANCD2Q9BXW9 1451 aa10.24□□□□□ -0.77
GDF9-202ENST00000378673 RUSC2Q8N2Y8 1516 aa10.23□□□□□ -0.77
GDF9-202ENST00000378673 CFTRP13569 1480 aa10.23□□□□□ -0.77
GDF9-202ENST00000378673 PKD2Q13563 968 aa10.21□□□□□ -0.78
GDF9-202ENST00000378673 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.21□□□□□ -0.78
GDF9-202ENST00000378673 UBTFP17480 764 aaKnown RBP10.2□□□□□ -0.78
GDF9-202ENST00000378673 BRD2P25440 801 aaKnown RBP10.2□□□□□ -0.78
GDF9-202ENST00000378673 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
GDF9-202ENST00000378673 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
GDF9-202ENST00000378673 VPS8Q8N3P4 1428 aa10.2□□□□□ -0.78
GDF9-202ENST00000378673 MRC2Q9UBG0 1479 aa10.19□□□□□ -0.78
GDF9-202ENST00000378673 PAXIP1Q6ZW49 1069 aaPredicted RBP10.19□□□□□ -0.78
GDF9-202ENST00000378673 MIER1Q8N108 512 aa10.18□□□□□ -0.78
GDF9-202ENST00000378673 BBXQ8WY36 941 aaPredicted RBP10.18□□□□□ -0.78
GDF9-202ENST00000378673 CLIP1P30622 1438 aa10.17□□□□□ -0.78
GDF9-202ENST00000378673 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
GDF9-202ENST00000378673 CCDC136Q96JN2 1154 aa10.16□□□□□ -0.78
GDF9-202ENST00000378673 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
GDF9-202ENST00000378673 ATF5Q9Y2D1 282 aaPredicted RBP10.16□□□□□ -0.78
GDF9-202ENST00000378673 SYNJ1O43426 1573 aa10.15□□□□□ -0.78
GDF9-202ENST00000378673 WDR62O43379 1518 aa10.14□□□□□ -0.79
GDF9-202ENST00000378673 URB2Q14146 1524 aaKnown RBP10.14□□□□□ -0.79
GDF9-202ENST00000378673 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
GDF9-202ENST00000378673 PRDM2Q13029 1718 aa10.13□□□□□ -0.79
GDF9-202ENST00000378673 YTHDC1Q96MU7 727 aaKnown RBP10.13□□□□□ -0.79
GDF9-202ENST00000378673 HOXD11P31277 338 aaPredicted RBP10.12□□□□□ -0.79
GDF9-202ENST00000378673 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
GDF9-202ENST00000378673 AAMPQ13685 434 aa10.1□□□□□ -0.79
GDF9-202ENST00000378673 A0A0U1RQG5 324 aaPredicted RBP10.09□□□□□ -0.79
GDF9-202ENST00000378673 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
GDF9-202ENST00000378673 HNRNPUL2Q1KMD3 747 aaKnown RBP10.09□□□□□ -0.79
GDF9-202ENST00000378673 TSHZ2Q9NRE2 1034 aa10.08□□□□□ -0.8
GDF9-202ENST00000378673 RAPGEF2Q9Y4G8 1499 aa10.07□□□□□ -0.8
GDF9-202ENST00000378673 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
GDF9-202ENST00000378673 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
GDF9-202ENST00000378673 NBR1Q14596 966 aa10.06□□□□□ -0.8
GDF9-202ENST00000378673 DHX57Q6P158 1386 aaKnown RBP10.06□□□□□ -0.8
GDF9-202ENST00000378673 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
GDF9-202ENST00000378673 TOP2BQ02880 1626 aa10.05□□□□□ -0.8
GDF9-202ENST00000378673 ERICH6BQ5W0A0 696 aa10.04□□□□□ -0.8
GDF9-202ENST00000378673 BIVM-ERCC5R4GMW8 1640 aa10.03□□□□□ -0.8
GDF9-202ENST00000378673 ZNF608Q9ULD9 1512 aaPredicted RBP10.03□□□□□ -0.8
GDF9-202ENST00000378673 RSPH4AQ5TD94 716 aa10.03□□□□□ -0.8
GDF9-202ENST00000378673 RRBP1Q9P2E9 1410 aaKnown RBP10.02□□□□□ -0.81
GDF9-202ENST00000378673 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
GDF9-202ENST00000378673 CDK11AQ9UQ88 783 aaPredicted RBP10.02□□□□□ -0.81
GDF9-202ENST00000378673 DNMBPQ6XZF7 1577 aa10.01□□□□□ -0.81
GDF9-202ENST00000378673 RSPH6AQ9H0K4 717 aa10.01□□□□□ -0.81
GDF9-202ENST00000378673 PRXQ9BXM0 1461 aa10.01□□□□□ -0.81
GDF9-202ENST00000378673 ARAP1Q96P48 1450 aa10□□□□□ -0.81
GDF9-202ENST00000378673 SPDYE4A6NLX3 237 aa10□□□□□ -0.81
GDF9-202ENST00000378673 SUPT16HQ9Y5B9 1047 aaKnown RBP10□□□□□ -0.81
GDF9-202ENST00000378673 RAD54L2Q9Y4B4 1467 aa9.99□□□□□ -0.81
GDF9-202ENST00000378673 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
GDF9-202ENST00000378673 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
GDF9-202ENST00000378673 RBM10P98175 930 aaKnown RBP9.98□□□□□ -0.81
GDF9-202ENST00000378673 CUX1P39880 1505 aa9.97□□□□□ -0.81
GDF9-202ENST00000378673 PROM2Q8N271 834 aa9.97□□□□□ -0.81
GDF9-202ENST00000378673 AQRO60306 1485 aaKnown RBP eCLIP9.97□□□□□ -0.81
GDF9-202ENST00000378673 FGD5Q6ZNL6 1462 aa9.96□□□□□ -0.81
GDF9-202ENST00000378673 IFT140Q96RY7 1462 aa9.96□□□□□ -0.81
GDF9-202ENST00000378673 TDRD9Q8NDG6 1382 aaKnown RBP9.95□□□□□ -0.82
GDF9-202ENST00000378673 EIF4G3O43432 1585 aaKnown RBP9.95□□□□□ -0.82
GDF9-202ENST00000378673 TARBP1Q13395 1621 aaKnown RBP9.93□□□□□ -0.82
GDF9-202ENST00000378673 IGSF3O75054 1194 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms