RNA–Protein interactions for RNA: ENST00000378588.4

CYBB-201, Transcript of cytochrome b-245 beta chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYBB, Length 4,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBB-201ENST00000378588 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
CYBB-201ENST00000378588 EIF4G1Q04637 1599 aaKnown RBP8.42□□□□□ -1.06
CYBB-201ENST00000378588 CUX2O14529 1486 aa8.42□□□□□ -1.06
CYBB-201ENST00000378588 TSPY4P0CV99 314 aa8.41□□□□□ -1.06
CYBB-201ENST00000378588 TSPY10P0CW01 314 aa8.41□□□□□ -1.06
CYBB-201ENST00000378588 TMC1Q8TDI8 760 aa8.4□□□□□ -1.06
CYBB-201ENST00000378588 ANP32AP39687 249 aaKnown RBP8.39□□□□□ -1.07
CYBB-201ENST00000378588 RUSC2Q8N2Y8 1516 aa8.39□□□□□ -1.07
CYBB-201ENST00000378588 SMARCA4P51532 1647 aa8.39□□□□□ -1.07
CYBB-201ENST00000378588 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
CYBB-201ENST00000378588 SETD5Q9C0A6 1442 aa8.37□□□□□ -1.07
CYBB-201ENST00000378588 ATAD2BQ9ULI0 1458 aa8.37□□□□□ -1.07
CYBB-201ENST00000378588 RAPGEF2Q9Y4G8 1499 aa8.37□□□□□ -1.07
CYBB-201ENST00000378588 KDM2AQ9Y2K7 1162 aa8.36□□□□□ -1.07
CYBB-201ENST00000378588 CCDC136Q96JN2 1154 aa8.35□□□□□ -1.07
CYBB-201ENST00000378588 SUPT16HQ9Y5B9 1047 aaKnown RBP8.35□□□□□ -1.07
CYBB-201ENST00000378588 PLEKHD1A6NEE1 506 aa8.34□□□□□ -1.07
CYBB-201ENST00000378588 IRX6P78412 446 aaPredicted RBP8.34□□□□□ -1.07
CYBB-201ENST00000378588 RAB3GAP2Q9H2M9 1393 aa8.34□□□□□ -1.07
CYBB-201ENST00000378588 CFDP1Q9UEE9 299 aaPredicted RBP8.34□□□□□ -1.07
CYBB-201ENST00000378588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.33□□□□□ -1.08
CYBB-201ENST00000378588 CCER2I3L3R5 266 aa8.33□□□□□ -1.08
CYBB-201ENST00000378588 CANXP27824 592 aaKnown RBP8.33□□□□□ -1.08
CYBB-201ENST00000378588 SALL2Q9Y467 1007 aaPredicted RBP8.33□□□□□ -1.08
CYBB-201ENST00000378588 ARHGAP35Q9NRY4 1499 aa8.31□□□□□ -1.08
CYBB-201ENST00000378588 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
CYBB-201ENST00000378588 DHX57Q6P158 1386 aaKnown RBP8.3□□□□□ -1.08
CYBB-201ENST00000378588 CADPSQ9ULU8 1353 aa8.3□□□□□ -1.08
CYBB-201ENST00000378588 PPP1R15AO75807 674 aaPredicted RBP8.3□□□□□ -1.08
CYBB-201ENST00000378588 FMN1Q68DA7 1419 aa8.28□□□□□ -1.08
CYBB-201ENST00000378588 NEFMP07197 916 aa8.27□□□□□ -1.09
CYBB-201ENST00000378588 CARD11Q9BXL7 1154 aa8.27□□□□□ -1.09
CYBB-201ENST00000378588 CHGAP10645 457 aaKnown RBP8.26□□□□□ -1.09
CYBB-201ENST00000378588 ZBTB47Q9UFB7 747 aaPredicted RBP8.26□□□□□ -1.09
CYBB-201ENST00000378588 WDR43Q15061 677 aaKnown RBP eCLIP8.26□□□□□ -1.09
CYBB-201ENST00000378588 BICRAQ9NZM4 1560 aa8.26□□□□□ -1.09
CYBB-201ENST00000378588 TDRD9Q8NDG6 1382 aaKnown RBP8.26□□□□□ -1.09
CYBB-201ENST00000378588 RGL3Q3MIN7 710 aa8.26□□□□□ -1.09
CYBB-201ENST00000378588 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.26□□□□□ -1.09
CYBB-201ENST00000378588 PPP4R2Q9NY27 417 aa8.25□□□□□ -1.09
CYBB-201ENST00000378588 ANP32EQ9BTT0 268 aa8.25□□□□□ -1.09
CYBB-201ENST00000378588 HSPA5P11021 654 aaKnown RBP8.25□□□□□ -1.09
CYBB-201ENST00000378588 PEG3Q9GZU2 1588 aa8.24□□□□□ -1.09
CYBB-201ENST00000378588 NPM1P06748 294 aaKnown RBP eCLIP8.24□□□□□ -1.09
CYBB-201ENST00000378588 FHOD3Q2V2M9 1422 aa8.23□□□□□ -1.09
CYBB-201ENST00000378588 KCNH8Q96L42 1107 aa8.23□□□□□ -1.09
CYBB-201ENST00000378588 IGF1RP08069 1367 aa8.23□□□□□ -1.09
CYBB-201ENST00000378588 MPHOSPH9Q99550 1183 aa8.22□□□□□ -1.09
CYBB-201ENST00000378588 PDS5BQ9NTI5 1447 aa8.22□□□□□ -1.09
CYBB-201ENST00000378588 KIF21BO75037 1637 aa8.2□□□□□ -1.1
CYBB-201ENST00000378588 NBR1Q14596 966 aa8.2□□□□□ -1.1
CYBB-201ENST00000378588 CDCA8Q53HL2 280 aa8.2□□□□□ -1.1
CYBB-201ENST00000378588 FOXD1Q16676 465 aa8.2□□□□□ -1.1
CYBB-201ENST00000378588 SENP3-EIF4A1A0A087X0R7 540 aa8.19□□□□□ -1.1
CYBB-201ENST00000378588 UPF2Q9HAU5 1272 aaKnown RBP8.19□□□□□ -1.1
CYBB-201ENST00000378588 ERICH6BQ5W0A0 696 aa8.19□□□□□ -1.1
CYBB-201ENST00000378588 L3MBTL2Q969R5 705 aa8.19□□□□□ -1.1
CYBB-201ENST00000378588 KNSTRNQ9Y448 316 aa8.19□□□□□ -1.1
CYBB-201ENST00000378588 NCAPD3P42695 1498 aa8.18□□□□□ -1.1
CYBB-201ENST00000378588 PKD2Q13563 968 aa8.18□□□□□ -1.1
CYBB-201ENST00000378588 DCAF11Q8TEB1 546 aa8.18□□□□□ -1.1
CYBB-201ENST00000378588 B4GALNT3Q6L9W6 998 aa8.18□□□□□ -1.1
CYBB-201ENST00000378588 RBM19Q9Y4C8 960 aaKnown RBP8.17□□□□□ -1.1
CYBB-201ENST00000378588 STAG3Q9UJ98 1225 aa8.17□□□□□ -1.1
CYBB-201ENST00000378588 TSHZ2Q9NRE2 1034 aa8.16□□□□□ -1.1
CYBB-201ENST00000378588 FANCD2Q9BXW9 1451 aa8.16□□□□□ -1.1
CYBB-201ENST00000378588 BCL11AQ9H165 835 aa8.15□□□□□ -1.1
CYBB-201ENST00000378588 SYNJ1O43426 1573 aa8.15□□□□□ -1.11
CYBB-201ENST00000378588 ERCC6Q03468 1493 aa8.14□□□□□ -1.11
CYBB-201ENST00000378588 ERICH3Q5RHP9 1530 aa8.14□□□□□ -1.11
CYBB-201ENST00000378588 PRXQ9BXM0 1461 aa8.14□□□□□ -1.11
CYBB-201ENST00000378588 CARMIL2Q6F5E8 1435 aa8.13□□□□□ -1.11
CYBB-201ENST00000378588 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
CYBB-201ENST00000378588 ARAP1Q96P48 1450 aa8.13□□□□□ -1.11
CYBB-201ENST00000378588 TMF1P82094 1093 aa8.13□□□□□ -1.11
CYBB-201ENST00000378588 ESF1Q9H501 851 aaKnown RBP8.13□□□□□ -1.11
CYBB-201ENST00000378588 ANKRD30AQ9BXX3 1397 aa8.13□□□□□ -1.11
CYBB-201ENST00000378588 DDRGK1Q96HY6 314 aa8.13□□□□□ -1.11
CYBB-201ENST00000378588 NUP155O75694 1391 aa8.13□□□□□ -1.11
CYBB-201ENST00000378588 PHLDB1Q86UU1 1377 aa8.13□□□□□ -1.11
CYBB-201ENST00000378588 RRBP1Q9P2E9 1410 aaKnown RBP8.13□□□□□ -1.11
CYBB-201ENST00000378588 SLC24A1O60721 1099 aa8.12□□□□□ -1.11
CYBB-201ENST00000378588 CC2D1BQ5T0F9 858 aaKnown RBP8.12□□□□□ -1.11
CYBB-201ENST00000378588 CCDC18Q5T9S5 1454 aa8.11□□□□□ -1.11
CYBB-201ENST00000378588 LRRC9Q6ZRR7 1453 aa8.11□□□□□ -1.11
CYBB-201ENST00000378588 CFTRP13569 1480 aa8.11□□□□□ -1.11
CYBB-201ENST00000378588 RALBP1Q15311 655 aa8.1□□□□□ -1.11
CYBB-201ENST00000378588 HSP90AA1P07900 732 aaKnown RBP8.1□□□□□ -1.11
CYBB-201ENST00000378588 CFAP53Q96M91 514 aa8.1□□□□□ -1.11
CYBB-201ENST00000378588 NOP58Q9Y2X3 529 aaKnown RBP8.1□□□□□ -1.11
CYBB-201ENST00000378588 FGD6Q6ZV73 1430 aa8.09□□□□□ -1.11
CYBB-201ENST00000378588 PRKRIP1Q9H875 184 aaPredicted RBP8.09□□□□□ -1.11
CYBB-201ENST00000378588 RSPH4AQ5TD94 716 aa8.08□□□□□ -1.12
CYBB-201ENST00000378588 RAD54L2Q9Y4B4 1467 aa8.08□□□□□ -1.12
CYBB-201ENST00000378588 JPH4Q96JJ6 628 aa8.08□□□□□ -1.12
CYBB-201ENST00000378588 KTN1Q86UP2 1357 aaKnown RBP8.08□□□□□ -1.12
CYBB-201ENST00000378588 PPM1GO15355 546 aaPredicted RBP8.08□□□□□ -1.12
CYBB-201ENST00000378588 TOP2BQ02880 1626 aa8.08□□□□□ -1.12
CYBB-201ENST00000378588 NUDCQ9Y266 331 aa8.07□□□□□ -1.12
CYBB-201ENST00000378588 UACAQ9BZF9 1416 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms