RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 RAB3GAP2Q9H2M9 1393 aa21.35■■□□□ 1.01
PPM1B-204ENST00000378551 MTUS2Q5JR59 1369 aa21.35■■□□□ 1.01
PPM1B-204ENST00000378551 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
PPM1B-204ENST00000378551 ANP32EQ9BTT0 268 aa21.31■■□□□ 1
PPM1B-204ENST00000378551 KDM2AQ9Y2K7 1162 aa21.3■■□□□ 1
PPM1B-204ENST00000378551 KIF27Q86VH2 1401 aa21.3■■□□□ 1
PPM1B-204ENST00000378551 B4GALNT3Q6L9W6 998 aa21.27■□□□□ 0.99
PPM1B-204ENST00000378551 SLC4A1APQ9BWU0 796 aaKnown RBP21.26■□□□□ 0.99
PPM1B-204ENST00000378551 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
PPM1B-204ENST00000378551 RBM19Q9Y4C8 960 aaKnown RBP21.24■□□□□ 0.99
PPM1B-204ENST00000378551 CUX2O14529 1486 aa21.22■□□□□ 0.99
PPM1B-204ENST00000378551 RTL5Q5HYW3 569 aaPredicted RBP21.22■□□□□ 0.99
PPM1B-204ENST00000378551 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
PPM1B-204ENST00000378551 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.98
PPM1B-204ENST00000378551 EIF4G2P78344 907 aaKnown RBP eCLIP21.16■□□□□ 0.98
PPM1B-204ENST00000378551 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
PPM1B-204ENST00000378551 DAXXQ9UER7 740 aaPredicted RBP21.14■□□□□ 0.97
PPM1B-204ENST00000378551 CCDC136Q96JN2 1154 aa21.13■□□□□ 0.97
PPM1B-204ENST00000378551 BCL11AQ9H165 835 aa21.13■□□□□ 0.97
PPM1B-204ENST00000378551 SETD5Q9C0A6 1442 aa21.11■□□□□ 0.97
PPM1B-204ENST00000378551 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
PPM1B-204ENST00000378551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.97
PPM1B-204ENST00000378551 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
PPM1B-204ENST00000378551 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.96
PPM1B-204ENST00000378551 HSPA5P11021 654 aaKnown RBP21.07■□□□□ 0.96
PPM1B-204ENST00000378551 FHOD3Q2V2M9 1422 aa21.06■□□□□ 0.96
PPM1B-204ENST00000378551 RGL3Q3MIN7 710 aa21.04■□□□□ 0.96
PPM1B-204ENST00000378551 ATAD2BQ9ULI0 1458 aa21.04■□□□□ 0.96
PPM1B-204ENST00000378551 SYNJ1O43426 1573 aa21.04■□□□□ 0.96
PPM1B-204ENST00000378551 KIF21BO75037 1637 aa21.03■□□□□ 0.96
PPM1B-204ENST00000378551 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
PPM1B-204ENST00000378551 ARAP1Q96P48 1450 aa20.99■□□□□ 0.95
PPM1B-204ENST00000378551 TDRD9Q8NDG6 1382 aaKnown RBP20.99■□□□□ 0.95
PPM1B-204ENST00000378551 PHLDB1Q86UU1 1377 aa20.93■□□□□ 0.94
PPM1B-204ENST00000378551 RTN4Q9NQC3 1192 aaKnown RBP20.91■□□□□ 0.94
PPM1B-204ENST00000378551 L3MBTL2Q969R5 705 aa20.9■□□□□ 0.94
PPM1B-204ENST00000378551 ARXQ96QS3 562 aa20.87■□□□□ 0.93
PPM1B-204ENST00000378551 LAS1LQ9Y4W2 734 aaKnown RBP20.87■□□□□ 0.93
PPM1B-204ENST00000378551 ZBTB47Q9UFB7 747 aaPredicted RBP20.85■□□□□ 0.93
PPM1B-204ENST00000378551 CCER2I3L3R5 266 aa20.84■□□□□ 0.93
PPM1B-204ENST00000378551 CCDC184Q52MB2 194 aa20.84■□□□□ 0.93
PPM1B-204ENST00000378551 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.93
PPM1B-204ENST00000378551 ARHGAP35Q9NRY4 1499 aa20.83■□□□□ 0.93
PPM1B-204ENST00000378551 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
PPM1B-204ENST00000378551 MPHOSPH9Q99550 1183 aa20.8■□□□□ 0.92
PPM1B-204ENST00000378551 CARD11Q9BXL7 1154 aa20.8■□□□□ 0.92
PPM1B-204ENST00000378551 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
PPM1B-204ENST00000378551 IGF1RP08069 1367 aa20.8■□□□□ 0.92
PPM1B-204ENST00000378551 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
PPM1B-204ENST00000378551 CC2D1BQ5T0F9 858 aaKnown RBP20.78■□□□□ 0.92
PPM1B-204ENST00000378551 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
PPM1B-204ENST00000378551 CHGAP10645 457 aaKnown RBP20.74■□□□□ 0.91
PPM1B-204ENST00000378551 CHMP7Q8WUX9 453 aaPredicted RBP20.74■□□□□ 0.91
PPM1B-204ENST00000378551 TSPY4P0CV99 314 aa20.73■□□□□ 0.91
PPM1B-204ENST00000378551 TSPY10P0CW01 314 aa20.73■□□□□ 0.91
PPM1B-204ENST00000378551 DCAF11Q8TEB1 546 aa20.72■□□□□ 0.91
PPM1B-204ENST00000378551 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
PPM1B-204ENST00000378551 ZNF644Q9H582 1327 aaPredicted RBP20.7■□□□□ 0.9
PPM1B-204ENST00000378551 PKD2Q13563 968 aa20.69■□□□□ 0.9
PPM1B-204ENST00000378551 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
PPM1B-204ENST00000378551 DEKP35659 375 aaKnown RBP20.68■□□□□ 0.9
PPM1B-204ENST00000378551 EIF5BO60841 1220 aaKnown RBP20.67■□□□□ 0.9
PPM1B-204ENST00000378551 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
PPM1B-204ENST00000378551 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
PPM1B-204ENST00000378551 TIMELESSQ9UNS1 1208 aa20.65■□□□□ 0.9
PPM1B-204ENST00000378551 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.89
PPM1B-204ENST00000378551 RGS3P49796 1198 aa20.63■□□□□ 0.89
PPM1B-204ENST00000378551 NEUROD2Q15784 382 aa20.63■□□□□ 0.89
PPM1B-204ENST00000378551 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
PPM1B-204ENST00000378551 RRBP1Q9P2E9 1410 aaKnown RBP20.61■□□□□ 0.89
PPM1B-204ENST00000378551 PRXQ9BXM0 1461 aa20.61■□□□□ 0.89
PPM1B-204ENST00000378551 TNNT2P45379 298 aaPredicted RBP20.6■□□□□ 0.89
PPM1B-204ENST00000378551 CCDC18Q5T9S5 1454 aa20.6■□□□□ 0.89
PPM1B-204ENST00000378551 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
PPM1B-204ENST00000378551 PLIN1O60240 522 aa20.58■□□□□ 0.89
PPM1B-204ENST00000378551 LRRC9Q6ZRR7 1453 aa20.58■□□□□ 0.89
PPM1B-204ENST00000378551 MSH5O43196 834 aa20.55■□□□□ 0.88
PPM1B-204ENST00000378551 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
PPM1B-204ENST00000378551 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
PPM1B-204ENST00000378551 C11orf95C9JLR9 678 aaPredicted RBP20.55■□□□□ 0.88
PPM1B-204ENST00000378551 NEFMP07197 916 aa20.54■□□□□ 0.88
PPM1B-204ENST00000378551 CUX1P39880 1505 aa20.54■□□□□ 0.88
PPM1B-204ENST00000378551 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
PPM1B-204ENST00000378551 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
PPM1B-204ENST00000378551 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
PPM1B-204ENST00000378551 NBPF8Q3BBV2 869 aa20.51■□□□□ 0.87
PPM1B-204ENST00000378551 SLC4A3P48751 1232 aa20.5■□□□□ 0.87
PPM1B-204ENST00000378551 FGD6Q6ZV73 1430 aa20.48■□□□□ 0.87
PPM1B-204ENST00000378551 KIF7Q2M1P5 1343 aa20.46■□□□□ 0.87
PPM1B-204ENST00000378551 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
PPM1B-204ENST00000378551 HNRNPMP52272 730 aaKnown RBP eCLIP20.46■□□□□ 0.873e-6■■■■□ 21.2
PPM1B-204ENST00000378551 EXOC6Q8TAG9 804 aa20.46■□□□□ 0.87
PPM1B-204ENST00000378551 SKAP1Q86WV1 359 aa20.46■□□□□ 0.87
PPM1B-204ENST00000378551 NUP155O75694 1391 aa20.44■□□□□ 0.86
PPM1B-204ENST00000378551 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
PPM1B-204ENST00000378551 NUDCQ9Y266 331 aa20.43■□□□□ 0.86
PPM1B-204ENST00000378551 NESP48681 1621 aa20.41■□□□□ 0.86
PPM1B-204ENST00000378551 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
PPM1B-204ENST00000378551 FRAT1Q92837 279 aaPredicted RBP20.41■□□□□ 0.86
PPM1B-204ENST00000378551 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms