RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
PCDHGA1-201ENST00000378105 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
PCDHGA1-201ENST00000378105 SAMD9Q5K651 1589 aa16.41■□□□□ 0.22
PCDHGA1-201ENST00000378105 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
PCDHGA1-201ENST00000378105 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
PCDHGA1-201ENST00000378105 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
PCDHGA1-201ENST00000378105 SOGA1O94964 1423 aa16.34■□□□□ 0.21
PCDHGA1-201ENST00000378105 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
PCDHGA1-201ENST00000378105 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
PCDHGA1-201ENST00000378105 IFT140Q96RY7 1462 aa16.25■□□□□ 0.19
PCDHGA1-201ENST00000378105 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
PCDHGA1-201ENST00000378105 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
PCDHGA1-201ENST00000378105 PODXL2Q9NZ53 605 aa16.14■□□□□ 0.18
PCDHGA1-201ENST00000378105 SALL2Q9Y467 1007 aaPredicted RBP16.14■□□□□ 0.18
PCDHGA1-201ENST00000378105 NUP160Q12769 1436 aa16.14■□□□□ 0.17
PCDHGA1-201ENST00000378105 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
PCDHGA1-201ENST00000378105 IGF1RP08069 1367 aa16.11■□□□□ 0.17
PCDHGA1-201ENST00000378105 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.09■□□□□ 0.17
PCDHGA1-201ENST00000378105 DISP1Q96F81 1524 aa16.08■□□□□ 0.16
PCDHGA1-201ENST00000378105 RAPGEF2Q9Y4G8 1499 aa16.08■□□□□ 0.16
PCDHGA1-201ENST00000378105 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
PCDHGA1-201ENST00000378105 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDHGA1-201ENST00000378105 UGGT2Q9NYU1 1516 aa16.04■□□□□ 0.16
PCDHGA1-201ENST00000378105 CFAP43Q8NDM7 1665 aa16.04■□□□□ 0.16
PCDHGA1-201ENST00000378105 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
PCDHGA1-201ENST00000378105 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.15
PCDHGA1-201ENST00000378105 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
PCDHGA1-201ENST00000378105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
PCDHGA1-201ENST00000378105 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
PCDHGA1-201ENST00000378105 GRIN2AQ12879 1464 aa16■□□□□ 0.15
PCDHGA1-201ENST00000378105 PPRC1Q5VV67 1664 aaKnown RBP16■□□□□ 0.15
PCDHGA1-201ENST00000378105 UBE2Q2Q8WVN8 375 aa15.98■□□□□ 0.15
PCDHGA1-201ENST00000378105 FBLN2P98095 1184 aa15.96■□□□□ 0.15
PCDHGA1-201ENST00000378105 ARAP1Q96P48 1450 aa15.96■□□□□ 0.15
PCDHGA1-201ENST00000378105 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
PCDHGA1-201ENST00000378105 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
PCDHGA1-201ENST00000378105 PKNOX2Q96KN3 472 aa15.95■□□□□ 0.14
PCDHGA1-201ENST00000378105 ADCY10Q96PN6 1610 aa15.94■□□□□ 0.14
PCDHGA1-201ENST00000378105 ABCA8O94911 1581 aa15.92■□□□□ 0.14
PCDHGA1-201ENST00000378105 MAGI3Q5TCQ9 1506 aa15.92■□□□□ 0.14
PCDHGA1-201ENST00000378105 KIF13AQ9H1H9 1805 aa15.91■□□□□ 0.14
PCDHGA1-201ENST00000378105 ITGAEP38570 1179 aa15.9■□□□□ 0.14
PCDHGA1-201ENST00000378105 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
PCDHGA1-201ENST00000378105 IQGAP2Q13576 1575 aa15.89■□□□□ 0.13
PCDHGA1-201ENST00000378105 RIMBP3CA6NJZ7 1639 aa15.88■□□□□ 0.13
PCDHGA1-201ENST00000378105 RIMBP3BA6NNM3 1639 aa15.88■□□□□ 0.13
PCDHGA1-201ENST00000378105 RIMBP3Q9UFD9 1639 aa15.88■□□□□ 0.13
PCDHGA1-201ENST00000378105 ZEB1P37275 1124 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA1-201ENST00000378105 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
PCDHGA1-201ENST00000378105 ARHGAP35Q9NRY4 1499 aa15.86■□□□□ 0.13
PCDHGA1-201ENST00000378105 RTN4Q9NQC3 1192 aaKnown RBP15.85■□□□□ 0.13
PCDHGA1-201ENST00000378105 EEA1Q15075 1411 aa15.85■□□□□ 0.13
PCDHGA1-201ENST00000378105 CCER1Q8TC90 406 aaPredicted RBP15.84■□□□□ 0.13
PCDHGA1-201ENST00000378105 FHAD1B1AJZ9 1412 aa15.83■□□□□ 0.12
PCDHGA1-201ENST00000378105 KDM5BQ9UGL1 1544 aa15.83■□□□□ 0.12
PCDHGA1-201ENST00000378105 PCF11O94913 1555 aaKnown RBP15.82■□□□□ 0.12
PCDHGA1-201ENST00000378105 SIGLEC1Q9BZZ2 1709 aa15.8■□□□□ 0.12
PCDHGA1-201ENST00000378105 TDRD9Q8NDG6 1382 aaKnown RBP15.78■□□□□ 0.12
PCDHGA1-201ENST00000378105 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
PCDHGA1-201ENST00000378105 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
PCDHGA1-201ENST00000378105 ABCC2Q92887 1545 aa15.76■□□□□ 0.11
PCDHGA1-201ENST00000378105 A0A0U1RQG5 324 aaPredicted RBP15.74■□□□□ 0.11
PCDHGA1-201ENST00000378105 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
PCDHGA1-201ENST00000378105 EFCAB5A4FU69 1503 aa15.74■□□□□ 0.11
PCDHGA1-201ENST00000378105 ZCCHC11Q5TAX3 1644 aaKnown RBP15.73■□□□□ 0.11
PCDHGA1-201ENST00000378105 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
PCDHGA1-201ENST00000378105 CDC42BPAQ5VT25 1732 aa15.71■□□□□ 0.11
PCDHGA1-201ENST00000378105 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.11
PCDHGA1-201ENST00000378105 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
PCDHGA1-201ENST00000378105 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
PCDHGA1-201ENST00000378105 DIEXFQ68CQ4 756 aaKnown RBP15.7■□□□□ 0.1
PCDHGA1-201ENST00000378105 TRIM26Q12899 539 aaPredicted RBP15.69■□□□□ 0.1
PCDHGA1-201ENST00000378105 MAP3K4Q9Y6R4 1608 aa15.68■□□□□ 0.1
PCDHGA1-201ENST00000378105 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
PCDHGA1-201ENST00000378105 RAPGEF6Q8TEU7 1601 aa15.67■□□□□ 0.1
PCDHGA1-201ENST00000378105 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
PCDHGA1-201ENST00000378105 MAP3K1Q13233 1512 aa15.61■□□□□ 0.09
PCDHGA1-201ENST00000378105 KIF14Q15058 1648 aa15.6■□□□□ 0.09
PCDHGA1-201ENST00000378105 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
PCDHGA1-201ENST00000378105 UHRF1BP1LA0JNW5 1464 aa15.59■□□□□ 0.09
PCDHGA1-201ENST00000378105 TNIKQ9UKE5 1360 aa15.58■□□□□ 0.08
PCDHGA1-201ENST00000378105 DEKP35659 375 aaKnown RBP15.58■□□□□ 0.08
PCDHGA1-201ENST00000378105 ABCA9Q8IUA7 1624 aa15.58■□□□□ 0.08
PCDHGA1-201ENST00000378105 FRMPD1Q5SYB0 1578 aa15.57■□□□□ 0.08
PCDHGA1-201ENST00000378105 BCANQ96GW7 911 aa15.56■□□□□ 0.08
PCDHGA1-201ENST00000378105 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
PCDHGA1-201ENST00000378105 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
PCDHGA1-201ENST00000378105 TIAM1Q13009 1591 aa15.55■□□□□ 0.08
PCDHGA1-201ENST00000378105 KLHL34Q8N239 644 aa15.54■□□□□ 0.08
PCDHGA1-201ENST00000378105 TTC37Q6PGP7 1564 aa15.53■□□□□ 0.08
PCDHGA1-201ENST00000378105 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
PCDHGA1-201ENST00000378105 PREX2Q70Z35 1606 aa15.49■□□□□ 0.07
PCDHGA1-201ENST00000378105 MAPKBP1O60336 1514 aa15.49■□□□□ 0.07
PCDHGA1-201ENST00000378105 DIP2BQ9P265 1576 aa15.48■□□□□ 0.07
PCDHGA1-201ENST00000378105 ABCC10Q5T3U5 1492 aa15.48■□□□□ 0.07
PCDHGA1-201ENST00000378105 RICTORQ6R327 1708 aa15.47■□□□□ 0.07
PCDHGA1-201ENST00000378105 IL27Q8NEV9 243 aa15.47■□□□□ 0.07
PCDHGA1-201ENST00000378105 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
PCDHGA1-201ENST00000378105 PDE4CQ08493 712 aa15.45■□□□□ 0.06
PCDHGA1-201ENST00000378105 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
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