RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
RNF38-205ENST00000377877 CTTNBP2Q8WZ74 1663 aa33.45■■■□□ 2.95
RNF38-205ENST00000377877 ARHGAP35Q9NRY4 1499 aa33.35■■■□□ 2.93
RNF38-205ENST00000377877 CEP170Q5SW79 1584 aa33.31■■■□□ 2.92
RNF38-205ENST00000377877 ARAP1Q96P48 1450 aa33.28■■■□□ 2.92
RNF38-205ENST00000377877 P3H3Q8IVL6 736 aa33.28■■■□□ 2.92
RNF38-205ENST00000377877 CHD1O14646 1710 aa33.28■■■□□ 2.92
RNF38-205ENST00000377877 KIAA0586Q9BVV6 1533 aa33.26■■■□□ 2.92
RNF38-205ENST00000377877 NUP160Q12769 1436 aa33.26■■■□□ 2.91
RNF38-205ENST00000377877 IQGAP2Q13576 1575 aa33.25■■■□□ 2.91
RNF38-205ENST00000377877 VPS8Q8N3P4 1428 aa33.17■■■□□ 2.9
RNF38-205ENST00000377877 EFCAB5A4FU69 1503 aa33.13■■■□□ 2.89
RNF38-205ENST00000377877 FHOD3Q2V2M9 1422 aa33.13■■■□□ 2.89
RNF38-205ENST00000377877 SAMD9Q5K651 1589 aa33.11■■■□□ 2.89
RNF38-205ENST00000377877 UGGT2Q9NYU1 1516 aa33.1■■■□□ 2.89
RNF38-205ENST00000377877 JPH4Q96JJ6 628 aa33.09■■■□□ 2.89
RNF38-205ENST00000377877 PPARGC1BQ86YN6 1023 aaKnown RBP33.06■■■□□ 2.88
RNF38-205ENST00000377877 DISP1Q96F81 1524 aa33.01■■■□□ 2.87
RNF38-205ENST00000377877 KIAA0556O60303 1618 aa32.92■■■□□ 2.86
RNF38-205ENST00000377877 CLASP1Q7Z460 1538 aa32.88■■■□□ 2.85
RNF38-205ENST00000377877 TTBK1Q5TCY1 1321 aaPredicted RBP32.87■■■□□ 2.85
RNF38-205ENST00000377877 FMN1Q68DA7 1419 aa32.87■■■□□ 2.85
RNF38-205ENST00000377877 PRG4Q92954 1404 aaPredicted RBP32.85■■■□□ 2.85
RNF38-205ENST00000377877 APLP2Q06481 763 aa32.85■■■□□ 2.85
RNF38-205ENST00000377877 ATP1B4Q9UN42 357 aaPredicted RBP32.84■■■□□ 2.85
RNF38-205ENST00000377877 CARMIL2Q6F5E8 1435 aa32.83■■■□□ 2.85
RNF38-205ENST00000377877 PCF11O94913 1555 aaKnown RBP32.83■■■□□ 2.85
RNF38-205ENST00000377877 OSCARQ8IYS5 282 aa32.83■■■□□ 2.85
RNF38-205ENST00000377877 SHROOM2Q13796 1616 aa32.82■■■□□ 2.84
RNF38-205ENST00000377877 CASKIN1Q8WXD9 1431 aa32.8■■■□□ 2.84
RNF38-205ENST00000377877 KANK4Q5T7N3 995 aaPredicted RBP32.74■■■□□ 2.83
RNF38-205ENST00000377877 ERCC6L2Q5T890 1561 aa32.74■■■□□ 2.83
RNF38-205ENST00000377877 FYCO1Q9BQS8 1478 aa32.73■■■□□ 2.83
RNF38-205ENST00000377877 LRRIQ1Q96JM4 1722 aa32.63■■■□□ 2.81
RNF38-205ENST00000377877 TIAM1Q13009 1591 aa32.63■■■□□ 2.81
RNF38-205ENST00000377877 PTPRGP23470 1445 aa32.61■■■□□ 2.81
RNF38-205ENST00000377877 MAP3K1Q13233 1512 aa32.61■■■□□ 2.81
RNF38-205ENST00000377877 PLB1Q6P1J6 1458 aa32.61■■■□□ 2.81
RNF38-205ENST00000377877 TRIM26Q12899 539 aaPredicted RBP32.6■■■□□ 2.81
RNF38-205ENST00000377877 ARID3CA6NKF2 412 aa32.59■■■□□ 2.81
RNF38-205ENST00000377877 PCGF6Q9BYE7 350 aa32.57■■■□□ 2.8
RNF38-205ENST00000377877 RAPGEF6Q8TEU7 1601 aa32.56■■■□□ 2.8
RNF38-205ENST00000377877 HECW1Q76N89 1606 aa32.54■■■□□ 2.8
RNF38-205ENST00000377877 CFAP43Q8NDM7 1665 aa32.54■■■□□ 2.8
RNF38-205ENST00000377877 NUP153P49790 1475 aaKnown RBP32.52■■■□□ 2.8
RNF38-205ENST00000377877 LRRC9Q6ZRR7 1453 aa32.51■■■□□ 2.8
RNF38-205ENST00000377877 EPRSP07814 1512 aaKnown RBP32.51■■■□□ 2.79
RNF38-205ENST00000377877 ABCA8O94911 1581 aa32.49■■■□□ 2.79
RNF38-205ENST00000377877 CDK13Q14004 1512 aaKnown RBP32.48■■■□□ 2.79
RNF38-205ENST00000377877 CCDC18Q5T9S5 1454 aa32.44■■■□□ 2.78
RNF38-205ENST00000377877 UACAQ9BZF9 1416 aa32.4■■■□□ 2.78
RNF38-205ENST00000377877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.38■■■□□ 2.77
RNF38-205ENST00000377877 HNRNPUL2Q1KMD3 747 aaKnown RBP32.38■■■□□ 2.77
RNF38-205ENST00000377877 MAGI3Q5TCQ9 1506 aa32.38■■■□□ 2.77
RNF38-205ENST00000377877 MTUS2Q5JR59 1369 aa32.37■■■□□ 2.77
RNF38-205ENST00000377877 ATP10BO94823 1461 aa32.33■■■□□ 2.77
RNF38-205ENST00000377877 ABCC2Q92887 1545 aa32.27■■■□□ 2.76
RNF38-205ENST00000377877 PHLDB1Q86UU1 1377 aa32.25■■■□□ 2.75
RNF38-205ENST00000377877 CDK11AQ9UQ88 783 aaPredicted RBP32.24■■■□□ 2.75
RNF38-205ENST00000377877 EHBP1L1Q8N3D4 1523 aa32.24■■■□□ 2.75
RNF38-205ENST00000377877 ARHGEF11O15085 1522 aa32.22■■■□□ 2.75
RNF38-205ENST00000377877 HRCP23327 699 aa32.22■■■□□ 2.75
RNF38-205ENST00000377877 UHRF1BP1LA0JNW5 1464 aa32.2■■■□□ 2.75
RNF38-205ENST00000377877 NCOA2Q15596 1464 aa32.18■■■□□ 2.74
RNF38-205ENST00000377877 PLEKHD1A6NEE1 506 aa32.17■■■□□ 2.74
RNF38-205ENST00000377877 SUPT6HQ7KZ85 1726 aaKnown RBP32.16■■■□□ 2.74
RNF38-205ENST00000377877 ADCY10Q96PN6 1610 aa32.14■■■□□ 2.74
RNF38-205ENST00000377877 TROQ12816 1431 aaPredicted RBP32.14■■■□□ 2.74
RNF38-205ENST00000377877 RRBP1Q9P2E9 1410 aaKnown RBP32.13■■■□□ 2.73
RNF38-205ENST00000377877 KDM5BQ9UGL1 1544 aa32.1■■■□□ 2.73
RNF38-205ENST00000377877 RIMBP3CA6NJZ7 1639 aa32.09■■■□□ 2.73
RNF38-205ENST00000377877 RIMBP3BA6NNM3 1639 aa32.09■■■□□ 2.73
RNF38-205ENST00000377877 RIMBP3Q9UFD9 1639 aa32.09■■■□□ 2.73
RNF38-205ENST00000377877 ZCCHC11Q5TAX3 1644 aaKnown RBP32.07■■■□□ 2.72
RNF38-205ENST00000377877 CCNB3Q8WWL7 1395 aa32.07■■■□□ 2.72
RNF38-205ENST00000377877 CYB5RLQ6IPT4 315 aa32.04■■■□□ 2.72
RNF38-205ENST00000377877 KIF14Q15058 1648 aa32.03■■■□□ 2.72
RNF38-205ENST00000377877 MYOM3Q5VTT5 1437 aa32.01■■■□□ 2.72
RNF38-205ENST00000377877 FGD6Q6ZV73 1430 aa31.99■■■□□ 2.71
RNF38-205ENST00000377877 FAM50AQ14320 339 aaKnown RBP31.97■■■□□ 2.71
RNF38-205ENST00000377877 KCNH8Q96L42 1107 aa31.95■■■□□ 2.71
RNF38-205ENST00000377877 ABCC10Q5T3U5 1492 aa31.91■■■□□ 2.7
RNF38-205ENST00000377877 ITGAEP38570 1179 aa31.9■■■□□ 2.7
RNF38-205ENST00000377877 NPM1P06748 294 aaKnown RBP eCLIP31.9■■■□□ 2.7
RNF38-205ENST00000377877 GPATCH8Q9UKJ3 1502 aaKnown RBP31.88■■■□□ 2.69
RNF38-205ENST00000377877 MIA2Q96PC5 1412 aa31.84■■■□□ 2.69
RNF38-205ENST00000377877 PTPN23Q9H3S7 1636 aa31.84■■■□□ 2.69
RNF38-205ENST00000377877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.83■■■□□ 2.69
RNF38-205ENST00000377877 ASXL2Q76L83 1435 aa31.82■■■□□ 2.68
RNF38-205ENST00000377877 ZNF644Q9H582 1327 aaPredicted RBP31.82■■■□□ 2.68
RNF38-205ENST00000377877 CFDP1Q9UEE9 299 aaPredicted RBP31.81■■■□□ 2.68
RNF38-205ENST00000377877 WDR7Q9Y4E6 1490 aa31.8■■■□□ 2.68
RNF38-205ENST00000377877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.8■■■□□ 2.68
RNF38-205ENST00000377877 CDC42BPAQ5VT25 1732 aa31.79■■■□□ 2.68
RNF38-205ENST00000377877 TCOF1Q13428 1488 aaKnown RBP31.78■■■□□ 2.68
RNF38-205ENST00000377877 TTC37Q6PGP7 1564 aa31.76■■■□□ 2.68
RNF38-205ENST00000377877 ZNF777Q9ULD5 760 aaPredicted RBP31.75■■■□□ 2.67
RNF38-205ENST00000377877 ITSN2Q9NZM3 1697 aa31.74■■■□□ 2.67
RNF38-205ENST00000377877 PTPRKQ15262 1439 aa31.7■■■□□ 2.67
RNF38-205ENST00000377877 CDC42BPBQ9Y5S2 1711 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms