RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
HMGN4-201ENST00000377575 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
HMGN4-201ENST00000377575 KIAA0586Q9BVV6 1533 aa28.69■■■□□ 2.18
HMGN4-201ENST00000377575 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
HMGN4-201ENST00000377575 JPH4Q96JJ6 628 aa28.66■■■□□ 2.18
HMGN4-201ENST00000377575 RAPGEF2Q9Y4G8 1499 aa28.58■■■□□ 2.17
HMGN4-201ENST00000377575 IQGAP2Q13576 1575 aa28.55■■■□□ 2.16
HMGN4-201ENST00000377575 TRHP20396 242 aaPredicted RBP28.51■■■□□ 2.15
HMGN4-201ENST00000377575 CTTNBP2Q8WZ74 1663 aa28.45■■■□□ 2.15
HMGN4-201ENST00000377575 CARMIL2Q6F5E8 1435 aa28.42■■■□□ 2.14
HMGN4-201ENST00000377575 PRXQ9BXM0 1461 aa28.39■■■□□ 2.13
HMGN4-201ENST00000377575 ADCY10Q96PN6 1610 aa28.36■■■□□ 2.13
HMGN4-201ENST00000377575 UGGT2Q9NYU1 1516 aa28.36■■■□□ 2.13
HMGN4-201ENST00000377575 EEA1Q15075 1411 aa28.33■■■□□ 2.13
HMGN4-201ENST00000377575 TNIKQ9UKE5 1360 aa28.32■■■□□ 2.12
HMGN4-201ENST00000377575 DISP1Q96F81 1524 aa28.3■■■□□ 2.12
HMGN4-201ENST00000377575 PTPRGP23470 1445 aa28.3■■■□□ 2.12
HMGN4-201ENST00000377575 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
HMGN4-201ENST00000377575 MAPKBP1O60336 1514 aa28.24■■■□□ 2.11
HMGN4-201ENST00000377575 NPM1P06748 294 aaKnown RBP eCLIP28.24■■■□□ 2.11
HMGN4-201ENST00000377575 CSRNP3Q8WYN3 585 aa28.23■■■□□ 2.11
HMGN4-201ENST00000377575 KIF13AQ9H1H9 1805 aa28.22■■■□□ 2.11
HMGN4-201ENST00000377575 GOLGA3Q08378 1498 aa28.19■■■□□ 2.1
HMGN4-201ENST00000377575 TTBK1Q5TCY1 1321 aaPredicted RBP28.18■■■□□ 2.1
HMGN4-201ENST00000377575 UHRF1BP1LA0JNW5 1464 aa28.15■■■□□ 2.1
HMGN4-201ENST00000377575 ABCC2Q92887 1545 aa28.14■■■□□ 2.1
HMGN4-201ENST00000377575 UACAQ9BZF9 1416 aa28.12■■■□□ 2.09
HMGN4-201ENST00000377575 ABCC10Q5T3U5 1492 aa28.11■■■□□ 2.09
HMGN4-201ENST00000377575 DIP2BQ9P265 1576 aa28.11■■■□□ 2.09
HMGN4-201ENST00000377575 KIF21BO75037 1637 aa28.09■■■□□ 2.09
HMGN4-201ENST00000377575 FAM9AQ8IZU1 332 aaPredicted RBP28.04■■■□□ 2.08
HMGN4-201ENST00000377575 ZCCHC11Q5TAX3 1644 aaKnown RBP28■■■□□ 2.07
HMGN4-201ENST00000377575 SAMD9Q5K651 1589 aa28■■■□□ 2.07
HMGN4-201ENST00000377575 KDM5BQ9UGL1 1544 aa28■■■□□ 2.07
HMGN4-201ENST00000377575 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
HMGN4-201ENST00000377575 PLB1Q6P1J6 1458 aa27.97■■■□□ 2.07
HMGN4-201ENST00000377575 ABCA8O94911 1581 aa27.96■■■□□ 2.07
HMGN4-201ENST00000377575 ASXL2Q76L83 1435 aa27.96■■■□□ 2.07
HMGN4-201ENST00000377575 TSPOAP1O95153 1857 aa27.9■■■□□ 2.06
HMGN4-201ENST00000377575 GLI2P10070 1586 aa27.88■■■□□ 2.05
HMGN4-201ENST00000377575 EFCAB5A4FU69 1503 aa27.84■■■□□ 2.05
HMGN4-201ENST00000377575 P3H3Q8IVL6 736 aa27.83■■■□□ 2.05
HMGN4-201ENST00000377575 WDR7Q9Y4E6 1490 aa27.81■■■□□ 2.04
HMGN4-201ENST00000377575 EPRSP07814 1512 aaKnown RBP27.81■■■□□ 2.04
HMGN4-201ENST00000377575 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
HMGN4-201ENST00000377575 MAP3K4Q9Y6R4 1608 aa27.77■■■□□ 2.04
HMGN4-201ENST00000377575 RANGAP1P46060 587 aaPredicted RBP27.76■■■□□ 2.03
HMGN4-201ENST00000377575 FHOD3Q2V2M9 1422 aa27.75■■■□□ 2.03
HMGN4-201ENST00000377575 PPRC1Q5VV67 1664 aaKnown RBP27.75■■■□□ 2.03
HMGN4-201ENST00000377575 KDM6BO15054 1643 aa27.74■■■□□ 2.03
HMGN4-201ENST00000377575 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
HMGN4-201ENST00000377575 EHMT2Q96KQ7 1210 aa27.7■■■□□ 2.02
HMGN4-201ENST00000377575 CFAP43Q8NDM7 1665 aa27.68■■■□□ 2.02
HMGN4-201ENST00000377575 ATP10BO94823 1461 aa27.67■■■□□ 2.02
HMGN4-201ENST00000377575 TEX14Q8IWB6 1497 aa27.65■■■□□ 2.02
HMGN4-201ENST00000377575 NUP153P49790 1475 aaKnown RBP27.64■■■□□ 2.01
HMGN4-201ENST00000377575 ARID3CA6NKF2 412 aa27.61■■■□□ 2.01
HMGN4-201ENST00000377575 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
HMGN4-201ENST00000377575 KCNH8Q96L42 1107 aa27.56■■■□□ 2
HMGN4-201ENST00000377575 FMN1Q68DA7 1419 aa27.54■■■□□ 2
HMGN4-201ENST00000377575 CD109Q6YHK3 1445 aa27.54■■■□□ 2
HMGN4-201ENST00000377575 MAGI3Q5TCQ9 1506 aa27.53■■■□□ 2
HMGN4-201ENST00000377575 ABCA9Q8IUA7 1624 aa27.52■■■□□ 2
HMGN4-201ENST00000377575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.52■■■□□ 2
HMGN4-201ENST00000377575 HNRNPUL2Q1KMD3 747 aaKnown RBP27.52■■■□□ 2
HMGN4-201ENST00000377575 HECW1Q76N89 1606 aa27.51■■□□□ 1.99
HMGN4-201ENST00000377575 CDK13Q14004 1512 aaKnown RBP27.41■■□□□ 1.98
HMGN4-201ENST00000377575 COL17A1Q9UMD9 1497 aaPredicted RBP27.4■■□□□ 1.98
HMGN4-201ENST00000377575 PLEKHD1A6NEE1 506 aa27.39■■□□□ 1.98
HMGN4-201ENST00000377575 LRRIQ1Q96JM4 1722 aa27.33■■□□□ 1.96
HMGN4-201ENST00000377575 PCF11O94913 1555 aaKnown RBP27.32■■□□□ 1.96
HMGN4-201ENST00000377575 ATP1B4Q9UN42 357 aaPredicted RBP27.32■■□□□ 1.96
HMGN4-201ENST00000377575 CLIP1P30622 1438 aa27.32■■□□□ 1.96
HMGN4-201ENST00000377575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.31■■□□□ 1.965e-7■□□□□ 8.9
HMGN4-201ENST00000377575 ARAP3Q8WWN8 1544 aa27.31■■□□□ 1.96
HMGN4-201ENST00000377575 PHLDB1Q86UU1 1377 aa27.3■■□□□ 1.96
HMGN4-201ENST00000377575 NEO1Q92859 1461 aa27.3■■□□□ 1.96
HMGN4-201ENST00000377575 TTC37Q6PGP7 1564 aa27.3■■□□□ 1.96
HMGN4-201ENST00000377575 CFAP74Q9C0B2 1584 aa27.3■■□□□ 1.96
HMGN4-201ENST00000377575 CASKIN1Q8WXD9 1431 aa27.27■■□□□ 1.96
HMGN4-201ENST00000377575 CCDC18Q5T9S5 1454 aa27.25■■□□□ 1.95
HMGN4-201ENST00000377575 CDK11AQ9UQ88 783 aaPredicted RBP27.25■■□□□ 1.95
HMGN4-201ENST00000377575 FYCO1Q9BQS8 1478 aa27.24■■□□□ 1.95
HMGN4-201ENST00000377575 KIF14Q15058 1648 aa27.23■■□□□ 1.95
HMGN4-201ENST00000377575 MYO5CQ9NQX4 1742 aa27.2■■□□□ 1.94
HMGN4-201ENST00000377575 FANCAO15360 1455 aa27.19■■□□□ 1.94
HMGN4-201ENST00000377575 TROQ12816 1431 aaPredicted RBP27.18■■□□□ 1.94
HMGN4-201ENST00000377575 FRMPD1Q5SYB0 1578 aa27.14■■□□□ 1.93
HMGN4-201ENST00000377575 CEP162Q5TB80 1403 aa27.13■■□□□ 1.93
HMGN4-201ENST00000377575 AKNAQ7Z591 1439 aa27.12■■□□□ 1.93
HMGN4-201ENST00000377575 RICTORQ6R327 1708 aa27.11■■□□□ 1.93
HMGN4-201ENST00000377575 PLCH2O75038 1416 aa27.11■■□□□ 1.93
HMGN4-201ENST00000377575 ADGRL1O94910 1474 aa27.11■■□□□ 1.93
HMGN4-201ENST00000377575 DENND4BO75064 1496 aaPredicted RBP27.08■■□□□ 1.93
HMGN4-201ENST00000377575 KDM4FA0A1W2PPD8 638 aa27.08■■□□□ 1.93
HMGN4-201ENST00000377575 RAPGEF3O95398 923 aa27.06■■□□□ 1.92
HMGN4-201ENST00000377575 ARHGAP5Q13017 1502 aa27.02■■□□□ 1.92
HMGN4-201ENST00000377575 PREX2Q70Z35 1606 aa27.01■■□□□ 1.92
HMGN4-201ENST00000377575 ARHGEF40Q8TER5 1519 aa27.01■■□□□ 1.91
HMGN4-201ENST00000377575 ZMYM4Q5VZL5 1548 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms