RNA–Protein interactions for RNA: ENST00000377518.3

AL590399.1-201, humanhuman

TSL 1 (best)

Gene AL590399.1, Length 2,541 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590399.1-201ENST00000377518 RRBP1Q9P2E9 1410 aaKnown RBP23.01■■□□□ 1.27
AL590399.1-201ENST00000377518 ZBTB4Q9P1Z0 1013 aaPredicted RBP23■■□□□ 1.27
AL590399.1-201ENST00000377518 RTN4Q9NQC3 1192 aaKnown RBP22.99■■□□□ 1.27
AL590399.1-201ENST00000377518 RANGAP1P46060 587 aaPredicted RBP22.97■■□□□ 1.27
AL590399.1-201ENST00000377518 RTL5Q5HYW3 569 aaPredicted RBP22.97■■□□□ 1.27
AL590399.1-201ENST00000377518 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
AL590399.1-201ENST00000377518 HNRNPUQ00839 825 aaKnown RBP eCLIP22.95■■□□□ 1.26
AL590399.1-201ENST00000377518 HIRIP3Q9BW71 556 aaPredicted RBP22.93■■□□□ 1.26
AL590399.1-201ENST00000377518 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
AL590399.1-201ENST00000377518 RAB3GAP2Q9H2M9 1393 aa22.89■■□□□ 1.26
AL590399.1-201ENST00000377518 B4GALNT3Q6L9W6 998 aa22.89■■□□□ 1.25
AL590399.1-201ENST00000377518 CCNB3Q8WWL7 1395 aa22.86■■□□□ 1.25
AL590399.1-201ENST00000377518 SIN3AQ96ST3 1273 aa22.85■■□□□ 1.25
AL590399.1-201ENST00000377518 IPO9Q96P70 1041 aaKnown RBP22.84■■□□□ 1.25
AL590399.1-201ENST00000377518 WASHC2AQ641Q2 1341 aa22.79■■□□□ 1.24
AL590399.1-201ENST00000377518 ZBTB47Q9UFB7 747 aaPredicted RBP22.79■■□□□ 1.24
AL590399.1-201ENST00000377518 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
AL590399.1-201ENST00000377518 ANP32AP39687 249 aaKnown RBP22.78■■□□□ 1.24
AL590399.1-201ENST00000377518 TIMELESSQ9UNS1 1208 aa22.76■■□□□ 1.23
AL590399.1-201ENST00000377518 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
AL590399.1-201ENST00000377518 C11orf95C9JLR9 678 aaPredicted RBP22.71■■□□□ 1.23
AL590399.1-201ENST00000377518 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
AL590399.1-201ENST00000377518 SMARCA4P51532 1647 aa22.67■■□□□ 1.22
AL590399.1-201ENST00000377518 WASHC2CQ9Y4E1 1318 aa22.66■■□□□ 1.22
AL590399.1-201ENST00000377518 EIF5BO60841 1220 aaKnown RBP22.62■■□□□ 1.21
AL590399.1-201ENST00000377518 USP35Q9P2H5 1018 aa22.61■■□□□ 1.21
AL590399.1-201ENST00000377518 NEFMP07197 916 aa22.59■■□□□ 1.21
AL590399.1-201ENST00000377518 BRPF3Q9ULD4 1205 aa22.54■■□□□ 1.2
AL590399.1-201ENST00000377518 CCDC184Q52MB2 194 aa22.52■■□□□ 1.2
AL590399.1-201ENST00000377518 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
AL590399.1-201ENST00000377518 ZBED9Q6R2W3 1325 aa22.52■■□□□ 1.2
AL590399.1-201ENST00000377518 LAS1LQ9Y4W2 734 aaKnown RBP22.52■■□□□ 1.19
AL590399.1-201ENST00000377518 PKNOX2Q96KN3 472 aa22.51■■□□□ 1.19
AL590399.1-201ENST00000377518 NCAPD3P42695 1498 aa22.5■■□□□ 1.19
AL590399.1-201ENST00000377518 TONSLQ96HA7 1378 aa22.45■■□□□ 1.18
AL590399.1-201ENST00000377518 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.18
AL590399.1-201ENST00000377518 PRXQ9BXM0 1461 aa22.45■■□□□ 1.18
AL590399.1-201ENST00000377518 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
AL590399.1-201ENST00000377518 PPM1GO15355 546 aaPredicted RBP22.42■■□□□ 1.18
AL590399.1-201ENST00000377518 NPM2Q86SE8 214 aaKnown RBP22.41■■□□□ 1.18
AL590399.1-201ENST00000377518 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
AL590399.1-201ENST00000377518 AKNAQ7Z591 1439 aa22.39■■□□□ 1.17
AL590399.1-201ENST00000377518 GSE1Q14687 1217 aa22.39■■□□□ 1.17
AL590399.1-201ENST00000377518 RSPH6AQ9H0K4 717 aa22.38■■□□□ 1.17
AL590399.1-201ENST00000377518 ARHGAP35Q9NRY4 1499 aa22.36■■□□□ 1.17
AL590399.1-201ENST00000377518 FAM50AQ14320 339 aaKnown RBP22.36■■□□□ 1.17
AL590399.1-201ENST00000377518 RNF123Q5XPI4 1314 aa22.35■■□□□ 1.17
AL590399.1-201ENST00000377518 MRS2Q9HD23 443 aa22.35■■□□□ 1.17
AL590399.1-201ENST00000377518 SMG6Q86US8 1419 aaKnown RBP22.34■■□□□ 1.17
AL590399.1-201ENST00000377518 TIAM1Q13009 1591 aa22.34■■□□□ 1.17
AL590399.1-201ENST00000377518 PHLDB1Q86UU1 1377 aa22.33■■□□□ 1.17
AL590399.1-201ENST00000377518 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
AL590399.1-201ENST00000377518 CNTLNQ9NXG0 1405 aa22.32■■□□□ 1.16
AL590399.1-201ENST00000377518 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
AL590399.1-201ENST00000377518 MAP3K1Q13233 1512 aa22.29■■□□□ 1.16
AL590399.1-201ENST00000377518 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
AL590399.1-201ENST00000377518 HSPA5P11021 654 aaKnown RBP22.28■■□□□ 1.16
AL590399.1-201ENST00000377518 NUDCQ9Y266 331 aa22.26■■□□□ 1.15
AL590399.1-201ENST00000377518 PDE4AP27815 886 aa22.26■■□□□ 1.15
AL590399.1-201ENST00000377518 FRAT1Q92837 279 aaPredicted RBP22.26■■□□□ 1.15
AL590399.1-201ENST00000377518 LRRC9Q6ZRR7 1453 aa22.26■■□□□ 1.15
AL590399.1-201ENST00000377518 KDM5BQ9UGL1 1544 aa22.25■■□□□ 1.15
AL590399.1-201ENST00000377518 TCERG1O14776 1098 aaKnown RBP22.24■■□□□ 1.15
AL590399.1-201ENST00000377518 FAM43AQ8N2R8 423 aa22.23■■□□□ 1.15
AL590399.1-201ENST00000377518 BACH2Q9BYV9 841 aa22.22■■□□□ 1.15
AL590399.1-201ENST00000377518 NFKBIBQ15653 356 aa22.21■■□□□ 1.15
AL590399.1-201ENST00000377518 GLIPR1L2Q4G1C9 344 aa22.17■■□□□ 1.14
AL590399.1-201ENST00000377518 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
AL590399.1-201ENST00000377518 EIF4G2P78344 907 aaKnown RBP eCLIP22.15■■□□□ 1.14
AL590399.1-201ENST00000377518 MS4A1P11836 297 aa22.13■■□□□ 1.13
AL590399.1-201ENST00000377518 DDRGK1Q96HY6 314 aa22.13■■□□□ 1.13
AL590399.1-201ENST00000377518 UACAQ9BZF9 1416 aa22.12■■□□□ 1.13
AL590399.1-201ENST00000377518 CCDC18Q5T9S5 1454 aa22.12■■□□□ 1.13
AL590399.1-201ENST00000377518 CCDC7Q96M83 1385 aa22.11■■□□□ 1.13
AL590399.1-201ENST00000377518 ZMYND15Q9H091 742 aa22.11■■□□□ 1.13
AL590399.1-201ENST00000377518 NCOA1Q15788 1441 aa22.09■■□□□ 1.13
AL590399.1-201ENST00000377518 DCAF11Q8TEB1 546 aa22.09■■□□□ 1.13
AL590399.1-201ENST00000377518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
AL590399.1-201ENST00000377518 VSIG10Q8N0Z9 540 aa22.07■■□□□ 1.12
AL590399.1-201ENST00000377518 CFAP43Q8NDM7 1665 aa22.05■■□□□ 1.12
AL590399.1-201ENST00000377518 EXOC6Q8TAG9 804 aa22.04■■□□□ 1.12
AL590399.1-201ENST00000377518 KIF27Q86VH2 1401 aa22.02■■□□□ 1.11
AL590399.1-201ENST00000377518 SLC4A3P48751 1232 aa22.01■■□□□ 1.11
AL590399.1-201ENST00000377518 PTPN23Q9H3S7 1636 aa21.99■■□□□ 1.11
AL590399.1-201ENST00000377518 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.11
AL590399.1-201ENST00000377518 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
AL590399.1-201ENST00000377518 RRP1P56182 461 aaKnown RBP21.98■■□□□ 1.11
AL590399.1-201ENST00000377518 SENP3-EIF4A1A0A087X0R7 540 aa21.97■■□□□ 1.11
AL590399.1-201ENST00000377518 FRAT2O75474 233 aaPredicted RBP21.96■■□□□ 1.11
AL590399.1-201ENST00000377518 RRAGDQ9NQL2 400 aaPredicted RBP21.96■■□□□ 1.11
AL590399.1-201ENST00000377518 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
AL590399.1-201ENST00000377518 DAXXQ9UER7 740 aaPredicted RBP21.94■■□□□ 1.1
AL590399.1-201ENST00000377518 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
AL590399.1-201ENST00000377518 KIF7Q2M1P5 1343 aa21.93■■□□□ 1.1
AL590399.1-201ENST00000377518 PTPRKQ15262 1439 aa21.93■■□□□ 1.1
AL590399.1-201ENST00000377518 POLR1AO95602 1720 aaPredicted RBP21.92■■□□□ 1.1
AL590399.1-201ENST00000377518 PCF11O94913 1555 aaKnown RBP21.91■■□□□ 1.1
AL590399.1-201ENST00000377518 NAIPQ13075 1403 aa21.89■■□□□ 1.1
AL590399.1-201ENST00000377518 FGD6Q6ZV73 1430 aa21.89■■□□□ 1.09
AL590399.1-201ENST00000377518 HSP90AA2PQ14568 343 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms