RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 KIAA0586Q9BVV6 1533 aa37.27■■■■□ 3.56
SRM-201ENST00000376957 PRG4Q92954 1404 aaPredicted RBP37.25■■■■□ 3.55
SRM-201ENST00000376957 RAPGEF2Q9Y4G8 1499 aa37.19■■■■□ 3.54
SRM-201ENST00000376957 ERCC6L2Q5T890 1561 aa37.18■■■■□ 3.54
SRM-201ENST00000376957 TRHP20396 242 aaPredicted RBP37.04■■■■□ 3.52
SRM-201ENST00000376957 IQGAP2Q13576 1575 aa37.01■■■■□ 3.52
SRM-201ENST00000376957 CARMIL2Q6F5E8 1435 aa36.99■■■■□ 3.51
SRM-201ENST00000376957 EEA1Q15075 1411 aa36.98■■■■□ 3.51
SRM-201ENST00000376957 CSRNP3Q8WYN3 585 aa36.95■■■■□ 3.51
SRM-201ENST00000376957 PRXQ9BXM0 1461 aa36.92■■■■□ 3.5
SRM-201ENST00000376957 NPM1P06748 294 aaKnown RBP eCLIP36.86■■■■□ 3.49
SRM-201ENST00000376957 CHIC1Q5VXU3 224 aa36.85■■■■□ 3.49
SRM-201ENST00000376957 CTTNBP2Q8WZ74 1663 aa36.82■■■■□ 3.48
SRM-201ENST00000376957 PTPRGP23470 1445 aa36.81■■■■□ 3.48
SRM-201ENST00000376957 TNIKQ9UKE5 1360 aa36.8■■■■□ 3.48
SRM-201ENST00000376957 UGGT2Q9NYU1 1516 aa36.77■■■■□ 3.48
SRM-201ENST00000376957 TTBK1Q5TCY1 1321 aaPredicted RBP36.74■■■■□ 3.47
SRM-201ENST00000376957 FAM9AQ8IZU1 332 aaPredicted RBP36.72■■■■□ 3.47
SRM-201ENST00000376957 DISP1Q96F81 1524 aa36.69■■■■□ 3.46
SRM-201ENST00000376957 GOLGA3Q08378 1498 aa36.69■■■■□ 3.46
SRM-201ENST00000376957 KIAA0556O60303 1618 aa36.63■■■■□ 3.45
SRM-201ENST00000376957 ADCY10Q96PN6 1610 aa36.63■■■■□ 3.45
SRM-201ENST00000376957 UACAQ9BZF9 1416 aa36.54■■■■□ 3.44
SRM-201ENST00000376957 MAPKBP1O60336 1514 aa36.51■■■■□ 3.44
SRM-201ENST00000376957 KIF21BO75037 1637 aa36.5■■■■□ 3.43
SRM-201ENST00000376957 UHRF1BP1LA0JNW5 1464 aa36.5■■■■□ 3.43
SRM-201ENST00000376957 ABCC2Q92887 1545 aa36.47■■■■□ 3.43
SRM-201ENST00000376957 FAM69CQ0P6D2 419 aa36.39■■■■□ 3.42
SRM-201ENST00000376957 ABCC10Q5T3U5 1492 aa36.37■■■■□ 3.41
SRM-201ENST00000376957 UBTFP17480 764 aaKnown RBP36.34■■■■□ 3.41
SRM-201ENST00000376957 KIF13AQ9H1H9 1805 aa36.34■■■■□ 3.41
SRM-201ENST00000376957 P3H3Q8IVL6 736 aa36.33■■■■□ 3.41
SRM-201ENST00000376957 PLB1Q6P1J6 1458 aa36.31■■■■□ 3.4
SRM-201ENST00000376957 RANGAP1P46060 587 aaPredicted RBP36.3■■■■□ 3.4
SRM-201ENST00000376957 KDM5BQ9UGL1 1544 aa36.29■■■■□ 3.4
SRM-201ENST00000376957 SAMD9Q5K651 1589 aa36.27■■■■□ 3.4
SRM-201ENST00000376957 DIP2BQ9P265 1576 aa36.26■■■■□ 3.39
SRM-201ENST00000376957 ASXL2Q76L83 1435 aa36.25■■■■□ 3.39
SRM-201ENST00000376957 EHMT2Q96KQ7 1210 aa36.25■■■■□ 3.39
SRM-201ENST00000376957 ABCA8O94911 1581 aa36.22■■■■□ 3.39
SRM-201ENST00000376957 ZCCHC11Q5TAX3 1644 aaKnown RBP36.2■■■■□ 3.39
SRM-201ENST00000376957 EFCAB5A4FU69 1503 aa36.18■■■■□ 3.38
SRM-201ENST00000376957 GLI2P10070 1586 aa36.06■■■■□ 3.36
SRM-201ENST00000376957 FHOD3Q2V2M9 1422 aa36.06■■■■□ 3.36
SRM-201ENST00000376957 WDR7Q9Y4E6 1490 aa36.05■■■■□ 3.36
SRM-201ENST00000376957 RAPGEF6Q8TEU7 1601 aa36.04■■■■□ 3.36
SRM-201ENST00000376957 EPRSP07814 1512 aaKnown RBP36.02■■■■□ 3.36
SRM-201ENST00000376957 TSPOAP1O95153 1857 aa36.01■■■■□ 3.36
SRM-201ENST00000376957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.99■■■■□ 3.35
SRM-201ENST00000376957 HNRNPUL2Q1KMD3 747 aaKnown RBP35.99■■■■□ 3.35
SRM-201ENST00000376957 ARID3CA6NKF2 412 aa35.96■■■■□ 3.35
SRM-201ENST00000376957 ATP10BO94823 1461 aa35.94■■■■□ 3.34
SRM-201ENST00000376957 KCNH8Q96L42 1107 aa35.94■■■■□ 3.34
SRM-201ENST00000376957 FMN1Q68DA7 1419 aa35.9■■■■□ 3.34
SRM-201ENST00000376957 TEX14Q8IWB6 1497 aa35.86■■■■□ 3.33
SRM-201ENST00000376957 MAP3K4Q9Y6R4 1608 aa35.86■■■■□ 3.33
SRM-201ENST00000376957 NUP153P49790 1475 aaKnown RBP35.85■■■■□ 3.33
SRM-201ENST00000376957 ARHGAP35Q9NRY4 1499 aa35.85■■■■□ 3.33
SRM-201ENST00000376957 KDM6BO15054 1643 aa35.83■■■■□ 3.33
SRM-201ENST00000376957 PLEKHD1A6NEE1 506 aa35.79■■■■□ 3.32
SRM-201ENST00000376957 CFAP43Q8NDM7 1665 aa35.78■■■■□ 3.32
SRM-201ENST00000376957 CD109Q6YHK3 1445 aa35.78■■■■□ 3.32
SRM-201ENST00000376957 ATP1B4Q9UN42 357 aaPredicted RBP35.78■■■■□ 3.32
SRM-201ENST00000376957 PPRC1Q5VV67 1664 aaKnown RBP35.75■■■■□ 3.31
SRM-201ENST00000376957 HECW1Q76N89 1606 aa35.7■■■■□ 3.31
SRM-201ENST00000376957 MAGI3Q5TCQ9 1506 aa35.68■■■■□ 3.3
SRM-201ENST00000376957 CDK11AQ9UQ88 783 aaPredicted RBP35.67■■■■□ 3.3
SRM-201ENST00000376957 CLIP1P30622 1438 aa35.65■■■■□ 3.3
SRM-201ENST00000376957 ABCA9Q8IUA7 1624 aa35.61■■■■□ 3.29
SRM-201ENST00000376957 CDK13Q14004 1512 aaKnown RBP35.55■■■■□ 3.28
SRM-201ENST00000376957 PHLDB1Q86UU1 1377 aa35.53■■■■□ 3.28
SRM-201ENST00000376957 CASKIN1Q8WXD9 1431 aa35.5■■■■□ 3.27
SRM-201ENST00000376957 CCDC18Q5T9S5 1454 aa35.46■■■■□ 3.27
SRM-201ENST00000376957 COL17A1Q9UMD9 1497 aaPredicted RBP35.43■■■■□ 3.26
SRM-201ENST00000376957 AEBP2Q6ZN18 517 aaPredicted RBP35.43■■■■□ 3.26
SRM-201ENST00000376957 PCF11O94913 1555 aaKnown RBP35.42■■■■□ 3.26
SRM-201ENST00000376957 NEO1Q92859 1461 aa35.42■■■■□ 3.26
SRM-201ENST00000376957 FYCO1Q9BQS8 1478 aa35.42■■■■□ 3.26
SRM-201ENST00000376957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.4■■■■□ 3.261e-8■■□□□ 11.6
SRM-201ENST00000376957 CEP162Q5TB80 1403 aa35.4■■■■□ 3.26
SRM-201ENST00000376957 ARAP3Q8WWN8 1544 aa35.39■■■■□ 3.26
SRM-201ENST00000376957 TROQ12816 1431 aaPredicted RBP35.36■■■■□ 3.25
SRM-201ENST00000376957 CFAP74Q9C0B2 1584 aa35.34■■■■□ 3.25
SRM-201ENST00000376957 LOC105371045A0A1W2PR82 267 aa35.33■■■■□ 3.25
SRM-201ENST00000376957 KIF14Q15058 1648 aa35.32■■■■□ 3.25
SRM-201ENST00000376957 LRRIQ1Q96JM4 1722 aa35.32■■■■□ 3.24
SRM-201ENST00000376957 TTC37Q6PGP7 1564 aa35.3■■■■□ 3.24
SRM-201ENST00000376957 FANCAO15360 1455 aa35.29■■■■□ 3.24
SRM-201ENST00000376957 PLCH2O75038 1416 aa35.25■■■■□ 3.23
SRM-201ENST00000376957 AKNAQ7Z591 1439 aa35.23■■■■□ 3.23
SRM-201ENST00000376957 MYO5CQ9NQX4 1742 aa35.22■■■■□ 3.23
SRM-201ENST00000376957 EFCAB2Q5VUJ9 269 aa35.21■■■■□ 3.23
SRM-201ENST00000376957 DENND4BO75064 1496 aaPredicted RBP35.18■■■■□ 3.22
SRM-201ENST00000376957 RAPGEF3O95398 923 aa35.18■■■■□ 3.22
SRM-201ENST00000376957 ARHGAP5Q13017 1502 aa35.1■■■■□ 3.21
SRM-201ENST00000376957 MTUS2Q5JR59 1369 aa35.1■■■■□ 3.21
SRM-201ENST00000376957 ADGRL1O94910 1474 aa35.09■■■■□ 3.21
SRM-201ENST00000376957 SCAPERQ9BY12 1400 aa35.05■■■■□ 3.2
SRM-201ENST00000376957 KDM4FA0A1W2PPD8 638 aa35.03■■■■□ 3.2
SRM-201ENST00000376957 RICTORQ6R327 1708 aa35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms