RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
HDAC6-204ENST00000376643 IGF1RP08069 1367 aa25.61■■□□□ 1.69
HDAC6-204ENST00000376643 KIAA0586Q9BVV6 1533 aa25.58■■□□□ 1.69
HDAC6-204ENST00000376643 NPM1P06748 294 aaKnown RBP eCLIP25.52■■□□□ 1.68
HDAC6-204ENST00000376643 CARMIL1Q5VZK9 1371 aa25.49■■□□□ 1.67
HDAC6-204ENST00000376643 CARMIL2Q6F5E8 1435 aa25.4■■□□□ 1.66
HDAC6-204ENST00000376643 MAPKBP1O60336 1514 aa25.4■■□□□ 1.66
HDAC6-204ENST00000376643 ABCC10Q5T3U5 1492 aa25.34■■□□□ 1.65
HDAC6-204ENST00000376643 PTPRGP23470 1445 aa25.33■■□□□ 1.65
HDAC6-204ENST00000376643 ADCY10Q96PN6 1610 aa25.33■■□□□ 1.65
HDAC6-204ENST00000376643 IQGAP2Q13576 1575 aa25.32■■□□□ 1.64
HDAC6-204ENST00000376643 KIF13AQ9H1H9 1805 aa25.32■■□□□ 1.64
HDAC6-204ENST00000376643 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
HDAC6-204ENST00000376643 FAM69CQ0P6D2 419 aa25.31■■□□□ 1.64
HDAC6-204ENST00000376643 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
HDAC6-204ENST00000376643 RAPGEF2Q9Y4G8 1499 aa25.28■■□□□ 1.64
HDAC6-204ENST00000376643 DIP2BQ9P265 1576 aa25.23■■□□□ 1.63
HDAC6-204ENST00000376643 ABCC2Q92887 1545 aa25.19■■□□□ 1.62
HDAC6-204ENST00000376643 UHRF1BP1LA0JNW5 1464 aa25.17■■□□□ 1.62
HDAC6-204ENST00000376643 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
HDAC6-204ENST00000376643 TTBK1Q5TCY1 1321 aaPredicted RBP25.15■■□□□ 1.62
HDAC6-204ENST00000376643 UACAQ9BZF9 1416 aa25.14■■□□□ 1.62
HDAC6-204ENST00000376643 PLB1Q6P1J6 1458 aa25.14■■□□□ 1.61
HDAC6-204ENST00000376643 DISP1Q96F81 1524 aa25.13■■□□□ 1.61
HDAC6-204ENST00000376643 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
HDAC6-204ENST00000376643 ASXL2Q76L83 1435 aa25.06■■□□□ 1.6
HDAC6-204ENST00000376643 KIAA0556O60303 1618 aa25.06■■□□□ 1.6
HDAC6-204ENST00000376643 KDM6BO15054 1643 aa25.04■■□□□ 1.6
HDAC6-204ENST00000376643 GLI2P10070 1586 aa25.03■■□□□ 1.6
HDAC6-204ENST00000376643 CTTNBP2Q8WZ74 1663 aa25.02■■□□□ 1.6
HDAC6-204ENST00000376643 KDM5BQ9UGL1 1544 aa25.02■■□□□ 1.6
HDAC6-204ENST00000376643 FAM9AQ8IZU1 332 aaPredicted RBP25.01■■□□□ 1.59
HDAC6-204ENST00000376643 PRXQ9BXM0 1461 aa25■■□□□ 1.59
HDAC6-204ENST00000376643 TSPOAP1O95153 1857 aa24.96■■□□□ 1.59
HDAC6-204ENST00000376643 EPRSP07814 1512 aaKnown RBP24.91■■□□□ 1.58
HDAC6-204ENST00000376643 TEX14Q8IWB6 1497 aa24.91■■□□□ 1.58
HDAC6-204ENST00000376643 ZCCHC11Q5TAX3 1644 aaKnown RBP24.91■■□□□ 1.58
HDAC6-204ENST00000376643 WDR7Q9Y4E6 1490 aa24.87■■□□□ 1.57
HDAC6-204ENST00000376643 EEA1Q15075 1411 aa24.86■■□□□ 1.57
HDAC6-204ENST00000376643 CSRNP3Q8WYN3 585 aa24.84■■□□□ 1.57
HDAC6-204ENST00000376643 MAP3K4Q9Y6R4 1608 aa24.83■■□□□ 1.57
HDAC6-204ENST00000376643 ABCA8O94911 1581 aa24.82■■□□□ 1.56
HDAC6-204ENST00000376643 PPRC1Q5VV67 1664 aaKnown RBP24.81■■□□□ 1.56
HDAC6-204ENST00000376643 MAGI3Q5TCQ9 1506 aa24.71■■□□□ 1.55
HDAC6-204ENST00000376643 CD109Q6YHK3 1445 aa24.7■■□□□ 1.55
HDAC6-204ENST00000376643 CFAP43Q8NDM7 1665 aa24.7■■□□□ 1.54
HDAC6-204ENST00000376643 KDM4FA0A1W2PPD8 638 aa24.67■■□□□ 1.54
HDAC6-204ENST00000376643 KCNH8Q96L42 1107 aa24.67■■□□□ 1.54
HDAC6-204ENST00000376643 SAMD9Q5K651 1589 aa24.67■■□□□ 1.54
HDAC6-204ENST00000376643 P3H3Q8IVL6 736 aa24.64■■□□□ 1.54
HDAC6-204ENST00000376643 COL17A1Q9UMD9 1497 aaPredicted RBP24.64■■□□□ 1.53
HDAC6-204ENST00000376643 ATP10BO94823 1461 aa24.6■■□□□ 1.53
HDAC6-204ENST00000376643 PHLDB1Q86UU1 1377 aa24.58■■□□□ 1.53
HDAC6-204ENST00000376643 RAPGEF6Q8TEU7 1601 aa24.58■■□□□ 1.53
HDAC6-204ENST00000376643 ADGRL1O94910 1474 aa24.57■■□□□ 1.52
HDAC6-204ENST00000376643 KIF21BO75037 1637 aa24.54■■□□□ 1.52
HDAC6-204ENST00000376643 EFCAB5A4FU69 1503 aa24.54■■□□□ 1.52
HDAC6-204ENST00000376643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
HDAC6-204ENST00000376643 HNRNPUL2Q1KMD3 747 aaKnown RBP24.53■■□□□ 1.52
HDAC6-204ENST00000376643 ARID3CA6NKF2 412 aa24.52■■□□□ 1.52
HDAC6-204ENST00000376643 ABCA9Q8IUA7 1624 aa24.5■■□□□ 1.51
HDAC6-204ENST00000376643 ARAP3Q8WWN8 1544 aa24.5■■□□□ 1.51
HDAC6-204ENST00000376643 FHOD3Q2V2M9 1422 aa24.47■■□□□ 1.51
HDAC6-204ENST00000376643 NUP153P49790 1475 aaKnown RBP24.46■■□□□ 1.51
HDAC6-204ENST00000376643 RANGAP1P46060 587 aaPredicted RBP24.46■■□□□ 1.51
HDAC6-204ENST00000376643 NEO1Q92859 1461 aa24.45■■□□□ 1.5
HDAC6-204ENST00000376643 PLEKHD1A6NEE1 506 aa24.44■■□□□ 1.5
HDAC6-204ENST00000376643 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
HDAC6-204ENST00000376643 FMN1Q68DA7 1419 aa24.34■■□□□ 1.49
HDAC6-204ENST00000376643 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
HDAC6-204ENST00000376643 CFAP74Q9C0B2 1584 aa24.32■■□□□ 1.48
HDAC6-204ENST00000376643 RAPGEF3O95398 923 aa24.26■■□□□ 1.47
HDAC6-204ENST00000376643 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
HDAC6-204ENST00000376643 FANCAO15360 1455 aa24.25■■□□□ 1.47
HDAC6-204ENST00000376643 DENND4BO75064 1496 aaPredicted RBP24.25■■□□□ 1.47
HDAC6-204ENST00000376643 HECW1Q76N89 1606 aa24.24■■□□□ 1.47
HDAC6-204ENST00000376643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.24■■□□□ 1.47
HDAC6-204ENST00000376643 AKNAQ7Z591 1439 aa24.23■■□□□ 1.47
HDAC6-204ENST00000376643 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
HDAC6-204ENST00000376643 HECW2Q9P2P5 1572 aa24.19■■□□□ 1.46
HDAC6-204ENST00000376643 CDK13Q14004 1512 aaKnown RBP24.19■■□□□ 1.46
HDAC6-204ENST00000376643 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
HDAC6-204ENST00000376643 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
HDAC6-204ENST00000376643 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
HDAC6-204ENST00000376643 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
HDAC6-204ENST00000376643 ARID4BQ4LE39 1312 aaPredicted RBP24.16■■□□□ 1.46
HDAC6-204ENST00000376643 ARHGEF40Q8TER5 1519 aa24.16■■□□□ 1.46
HDAC6-204ENST00000376643 MAGI2Q86UL8 1455 aa24.14■■□□□ 1.46
HDAC6-204ENST00000376643 PLCH2O75038 1416 aa24.14■■□□□ 1.45
HDAC6-204ENST00000376643 CLIP1P30622 1438 aa24.14■■□□□ 1.45
HDAC6-204ENST00000376643 ZMYM4Q5VZL5 1548 aa24.13■■□□□ 1.45
HDAC6-204ENST00000376643 RICTORQ6R327 1708 aa24.13■■□□□ 1.45
HDAC6-204ENST00000376643 ADAMTSL3P82987 1691 aa24.12■■□□□ 1.45
HDAC6-204ENST00000376643 POGZQ7Z3K3 1410 aa24.12■■□□□ 1.45
HDAC6-204ENST00000376643 PTPRMP28827 1452 aa24.1■■□□□ 1.45
HDAC6-204ENST00000376643 EFCAB2Q5VUJ9 269 aa24.09■■□□□ 1.45
HDAC6-204ENST00000376643 KIF14Q15058 1648 aa24.09■■□□□ 1.45
HDAC6-204ENST00000376643 TROQ12816 1431 aaPredicted RBP24.09■■□□□ 1.45
HDAC6-204ENST00000376643 BCORL1Q5H9F3 1711 aa24.08■■□□□ 1.45
HDAC6-204ENST00000376643 ZFYVE16Q7Z3T8 1539 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms