RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 KIF27Q86VH2 1401 aa26.24■■□□□ 1.79
CLCN6-204ENST00000376491 CUL7Q14999 1698 aa26.19■■□□□ 1.78
CLCN6-204ENST00000376491 KIF13AQ9H1H9 1805 aa26.19■■□□□ 1.78
CLCN6-204ENST00000376491 KIAA0586Q9BVV6 1533 aa26.18■■□□□ 1.78
CLCN6-204ENST00000376491 ADCY10Q96PN6 1610 aa26.09■■□□□ 1.77
CLCN6-204ENST00000376491 CARMIL1Q5VZK9 1371 aa26.08■■□□□ 1.77
CLCN6-204ENST00000376491 ABCC10Q5T3U5 1492 aa26.04■■□□□ 1.76
CLCN6-204ENST00000376491 MAPKBP1O60336 1514 aa26.04■■□□□ 1.76
CLCN6-204ENST00000376491 NPM1P06748 294 aaKnown RBP eCLIP26.03■■□□□ 1.76
CLCN6-204ENST00000376491 FAM69CQ0P6D2 419 aa26.01■■□□□ 1.75
CLCN6-204ENST00000376491 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
CLCN6-204ENST00000376491 DIP2BQ9P265 1576 aa25.98■■□□□ 1.75
CLCN6-204ENST00000376491 PTPRGP23470 1445 aa25.94■■□□□ 1.74
CLCN6-204ENST00000376491 IQGAP2Q13576 1575 aa25.91■■□□□ 1.74
CLCN6-204ENST00000376491 TTBK1Q5TCY1 1321 aaPredicted RBP25.89■■□□□ 1.74
CLCN6-204ENST00000376491 TNIKQ9UKE5 1360 aa25.89■■□□□ 1.74
CLCN6-204ENST00000376491 CARMIL2Q6F5E8 1435 aa25.88■■□□□ 1.73
CLCN6-204ENST00000376491 TSPOAP1O95153 1857 aa25.83■■□□□ 1.73
CLCN6-204ENST00000376491 RAPGEF2Q9Y4G8 1499 aa25.83■■□□□ 1.73
CLCN6-204ENST00000376491 DISP1Q96F81 1524 aa25.83■■□□□ 1.72
CLCN6-204ENST00000376491 ABCC2Q92887 1545 aa25.81■■□□□ 1.72
CLCN6-204ENST00000376491 UGGT2Q9NYU1 1516 aa25.77■■□□□ 1.72
CLCN6-204ENST00000376491 UHRF1BP1LA0JNW5 1464 aa25.76■■□□□ 1.71
CLCN6-204ENST00000376491 UACAQ9BZF9 1416 aa25.75■■□□□ 1.71
CLCN6-204ENST00000376491 KDM6BO15054 1643 aa25.74■■□□□ 1.71
CLCN6-204ENST00000376491 ASXL2Q76L83 1435 aa25.73■■□□□ 1.71
CLCN6-204ENST00000376491 PLB1Q6P1J6 1458 aa25.7■■□□□ 1.7
CLCN6-204ENST00000376491 KIAA0556O60303 1618 aa25.7■■□□□ 1.7
CLCN6-204ENST00000376491 GLI2P10070 1586 aa25.67■■□□□ 1.7
CLCN6-204ENST00000376491 PPRC1Q5VV67 1664 aaKnown RBP25.66■■□□□ 1.7
CLCN6-204ENST00000376491 KDM5BQ9UGL1 1544 aa25.66■■□□□ 1.7
CLCN6-204ENST00000376491 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.7
CLCN6-204ENST00000376491 ZCCHC11Q5TAX3 1644 aaKnown RBP25.61■■□□□ 1.69
CLCN6-204ENST00000376491 EPRSP07814 1512 aaKnown RBP25.58■■□□□ 1.69
CLCN6-204ENST00000376491 PRXQ9BXM0 1461 aa25.58■■□□□ 1.69
CLCN6-204ENST00000376491 KDM4FA0A1W2PPD8 638 aa25.55■■□□□ 1.68
CLCN6-204ENST00000376491 MAP3K4Q9Y6R4 1608 aa25.54■■□□□ 1.68
CLCN6-204ENST00000376491 GOLGA3Q08378 1498 aa25.51■■□□□ 1.67
CLCN6-204ENST00000376491 COL17A1Q9UMD9 1497 aaPredicted RBP25.49■■□□□ 1.67
CLCN6-204ENST00000376491 ABCA8O94911 1581 aa25.48■■□□□ 1.67
CLCN6-204ENST00000376491 WDR7Q9Y4E6 1490 aa25.47■■□□□ 1.67
CLCN6-204ENST00000376491 TEX14Q8IWB6 1497 aa25.41■■□□□ 1.66
CLCN6-204ENST00000376491 CSRNP3Q8WYN3 585 aa25.35■■□□□ 1.65
CLCN6-204ENST00000376491 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
CLCN6-204ENST00000376491 KCNH8Q96L42 1107 aa25.34■■□□□ 1.65
CLCN6-204ENST00000376491 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
CLCN6-204ENST00000376491 CD109Q6YHK3 1445 aa25.32■■□□□ 1.64
CLCN6-204ENST00000376491 MAGI3Q5TCQ9 1506 aa25.31■■□□□ 1.64
CLCN6-204ENST00000376491 ADGRL1O94910 1474 aa25.3■■□□□ 1.64
CLCN6-204ENST00000376491 ATP10BO94823 1461 aa25.28■■□□□ 1.64
CLCN6-204ENST00000376491 SAMD9Q5K651 1589 aa25.27■■□□□ 1.64
CLCN6-204ENST00000376491 ARID3CA6NKF2 412 aa25.27■■□□□ 1.64
CLCN6-204ENST00000376491 FAM9AQ8IZU1 332 aaPredicted RBP25.2■■□□□ 1.62
CLCN6-204ENST00000376491 EEA1Q15075 1411 aa25.2■■□□□ 1.62
CLCN6-204ENST00000376491 RAPGEF6Q8TEU7 1601 aa25.19■■□□□ 1.62
CLCN6-204ENST00000376491 ABCA9Q8IUA7 1624 aa25.14■■□□□ 1.61
CLCN6-204ENST00000376491 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
CLCN6-204ENST00000376491 ARAP3Q8WWN8 1544 aa25.11■■□□□ 1.61
CLCN6-204ENST00000376491 NUP153P49790 1475 aaKnown RBP25.1■■□□□ 1.61
CLCN6-204ENST00000376491 FHOD3Q2V2M9 1422 aa25.1■■□□□ 1.61
CLCN6-204ENST00000376491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.06■■□□□ 1.6
CLCN6-204ENST00000376491 HNRNPUL2Q1KMD3 747 aaKnown RBP25.06■■□□□ 1.6
CLCN6-204ENST00000376491 KIF21BO75037 1637 aa25.05■■□□□ 1.6
CLCN6-204ENST00000376491 PHLDB1Q86UU1 1377 aa25.02■■□□□ 1.6
CLCN6-204ENST00000376491 NEO1Q92859 1461 aa24.98■■□□□ 1.59
CLCN6-204ENST00000376491 HECW2Q9P2P5 1572 aa24.97■■□□□ 1.59
CLCN6-204ENST00000376491 EFCAB5A4FU69 1503 aa24.97■■□□□ 1.59
CLCN6-204ENST00000376491 RAPGEF3O95398 923 aa24.97■■□□□ 1.59
CLCN6-204ENST00000376491 FRMPD1Q5SYB0 1578 aa24.93■■□□□ 1.58
CLCN6-204ENST00000376491 PLEKHD1A6NEE1 506 aa24.93■■□□□ 1.58
CLCN6-204ENST00000376491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.88■■□□□ 1.57
CLCN6-204ENST00000376491 EHMT2Q96KQ7 1210 aa24.88■■□□□ 1.57
CLCN6-204ENST00000376491 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
CLCN6-204ENST00000376491 ADAMTSL3P82987 1691 aa24.86■■□□□ 1.57
CLCN6-204ENST00000376491 CDK13Q14004 1512 aaKnown RBP24.86■■□□□ 1.57
CLCN6-204ENST00000376491 TTC37Q6PGP7 1564 aa24.84■■□□□ 1.57
CLCN6-204ENST00000376491 UBTFP17480 764 aaKnown RBP24.83■■□□□ 1.57
CLCN6-204ENST00000376491 AKNAQ7Z591 1439 aa24.83■■□□□ 1.57
CLCN6-204ENST00000376491 RICTORQ6R327 1708 aa24.83■■□□□ 1.57
CLCN6-204ENST00000376491 FANCAO15360 1455 aa24.82■■□□□ 1.56
CLCN6-204ENST00000376491 DENND4BO75064 1496 aaPredicted RBP24.82■■□□□ 1.56
CLCN6-204ENST00000376491 ARHGAP35Q9NRY4 1499 aa24.8■■□□□ 1.56
CLCN6-204ENST00000376491 BCORL1Q5H9F3 1711 aa24.8■■□□□ 1.56
CLCN6-204ENST00000376491 ILDR1Q86SU0 546 aaPredicted RBP24.79■■□□□ 1.56
CLCN6-204ENST00000376491 PTPRMP28827 1452 aa24.78■■□□□ 1.56
CLCN6-204ENST00000376491 CFAP74Q9C0B2 1584 aa24.78■■□□□ 1.56
CLCN6-204ENST00000376491 ARHGEF40Q8TER5 1519 aa24.76■■□□□ 1.55
CLCN6-204ENST00000376491 FMN1Q68DA7 1419 aa24.75■■□□□ 1.55
CLCN6-204ENST00000376491 ARID4BQ4LE39 1312 aaPredicted RBP24.74■■□□□ 1.55
CLCN6-204ENST00000376491 MADDQ8WXG6 1647 aa24.74■■□□□ 1.55
CLCN6-204ENST00000376491 HECW1Q76N89 1606 aa24.73■■□□□ 1.55
CLCN6-204ENST00000376491 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
CLCN6-204ENST00000376491 ZMYM4Q5VZL5 1548 aa24.71■■□□□ 1.55
CLCN6-204ENST00000376491 PLCH2O75038 1416 aa24.71■■□□□ 1.55
CLCN6-204ENST00000376491 SIGLEC1Q9BZZ2 1709 aa24.68■■□□□ 1.54
CLCN6-204ENST00000376491 YEATS2Q9ULM3 1422 aa24.68■■□□□ 1.54
CLCN6-204ENST00000376491 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
CLCN6-204ENST00000376491 SCAPERQ9BY12 1400 aa24.66■■□□□ 1.54
CLCN6-204ENST00000376491 ZFYVE16Q7Z3T8 1539 aa24.66■■□□□ 1.54
CLCN6-204ENST00000376491 KIF14Q15058 1648 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms